RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 NEURL1BA8MQ27 555 aa9.73□□□□□ -0.85
MSH6-211ENST00000606499 MMP10P09238 476 aa9.73□□□□□ -0.85
MSH6-211ENST00000606499 IRX6P78412 446 aaPredicted RBP9.73□□□□□ -0.85
MSH6-211ENST00000606499 INTS3Q68E01 1043 aaKnown RBP9.73□□□□□ -0.85
MSH6-211ENST00000606499 NLRP10Q86W26 655 aa9.73□□□□□ -0.85
MSH6-211ENST00000606499 NLGN1Q8N2Q7 840 aa9.73□□□□□ -0.85
MSH6-211ENST00000606499 SLC16A10Q8TF71 515 aa9.73□□□□□ -0.85
MSH6-211ENST00000606499 MYH3P11055 1940 aa9.73□□□□□ -0.85
MSH6-211ENST00000606499 POLRMTO00411 1230 aaKnown RBP9.72□□□□□ -0.85
MSH6-211ENST00000606499 NTSR2O95665 410 aa9.72□□□□□ -0.85
MSH6-211ENST00000606499 TM4SF1P30408 202 aa9.72□□□□□ -0.85
MSH6-211ENST00000606499 CCT4P50991 539 aaKnown RBP9.72□□□□□ -0.85
MSH6-211ENST00000606499 PDE3AQ14432 1141 aa9.72□□□□□ -0.85
MSH6-211ENST00000606499 RTL5Q5HYW3 569 aaPredicted RBP9.72□□□□□ -0.85
MSH6-211ENST00000606499 SUSD4Q5VX71 490 aa9.72□□□□□ -0.85
MSH6-211ENST00000606499 ITPRIPQ8IWB1 547 aa9.72□□□□□ -0.85
MSH6-211ENST00000606499 JARID2Q92833 1246 aaPredicted RBP9.72□□□□□ -0.85
MSH6-211ENST00000606499 SETDB2Q96T68 719 aa9.72□□□□□ -0.85
MSH6-211ENST00000606499 MTFR1LQ9H019 292 aa9.72□□□□□ -0.85
MSH6-211ENST00000606499 CWC25Q9NXE8 425 aaPredicted RBP9.72□□□□□ -0.85
MSH6-211ENST00000606499 ATF5Q9Y2D1 282 aaPredicted RBP9.72□□□□□ -0.85
MSH6-211ENST00000606499 COG6Q9Y2V7 657 aa9.72□□□□□ -0.85
MSH6-211ENST00000606499 KIAA1551Q9HCM1 1747 aa9.72□□□□□ -0.85
MSH6-211ENST00000606499 KIF13BQ9NQT8 1826 aa9.72□□□□□ -0.85
MSH6-211ENST00000606499 ABCC12Q96J65 1359 aa9.72□□□□□ -0.85
MSH6-211ENST00000606499 IBTKQ9P2D0 1353 aaPredicted RBP9.72□□□□□ -0.85
MSH6-211ENST00000606499 ALDH1L1O75891 902 aa9.71□□□□□ -0.86
MSH6-211ENST00000606499 MS4A1P11836 297 aa9.71□□□□□ -0.86
MSH6-211ENST00000606499 TRIM28Q13263 835 aaKnown RBP9.71□□□□□ -0.86
MSH6-211ENST00000606499 GCKRQ14397 625 aa9.71□□□□□ -0.86
MSH6-211ENST00000606499 MVPQ14764 893 aaKnown RBP9.71□□□□□ -0.86
MSH6-211ENST00000606499 PARP10Q53GL7 1025 aa9.71□□□□□ -0.86
MSH6-211ENST00000606499 SYNE4Q8N205 404 aa9.71□□□□□ -0.86
MSH6-211ENST00000606499 CCDC24Q8N4L8 307 aa9.71□□□□□ -0.86
MSH6-211ENST00000606499 CCDC191Q8NCU4 936 aa9.71□□□□□ -0.86
MSH6-211ENST00000606499 DLEC1Q9Y238 1755 aa9.7□□□□□ -0.86
MSH6-211ENST00000606499 SPEF2Q9C093 1822 aa9.7□□□□□ -0.86
MSH6-211ENST00000606499 CACNA1SQ13698 1873 aa9.7□□□□□ -0.86
MSH6-211ENST00000606499 SERPINB2P05120 415 aa9.7□□□□□ -0.86
MSH6-211ENST00000606499 UBE3BQ7Z3V4 1068 aa9.7□□□□□ -0.86
MSH6-211ENST00000606499 PPP1R42Q7Z4L9 355 aa9.7□□□□□ -0.86
MSH6-211ENST00000606499 NBPF5PQ86XG9 351 aaPredicted RBP9.7□□□□□ -0.86
MSH6-211ENST00000606499 NUTM1Q86Y26 1132 aa9.7□□□□□ -0.86
MSH6-211ENST00000606499 FAM89AQ96GI7 184 aa9.7□□□□□ -0.86
MSH6-211ENST00000606499 CRBNQ96SW2 442 aa9.7□□□□□ -0.86
MSH6-211ENST00000606499 MEIS3Q99687 375 aa9.7□□□□□ -0.86
MSH6-211ENST00000606499 TRMT112Q9UI30 125 aaKnown RBP9.7□□□□□ -0.86
MSH6-211ENST00000606499 PARP3Q9Y6F1 533 aa9.7□□□□□ -0.86
MSH6-211ENST00000606499 GRM8O00222 908 aa9.69□□□□□ -0.86
MSH6-211ENST00000606499 LRP5O75197 1615 aa9.69□□□□□ -0.86
MSH6-211ENST00000606499 PCCAP05165 728 aaPredicted RBP9.69□□□□□ -0.86
MSH6-211ENST00000606499 NBPF7P0C2Y1 421 aaPredicted RBP9.69□□□□□ -0.86
MSH6-211ENST00000606499 ERFEQ4G0M1 354 aa9.69□□□□□ -0.86
MSH6-211ENST00000606499 PRR5LQ6MZQ0 368 aa9.69□□□□□ -0.86
MSH6-211ENST00000606499 C10orf71Q711Q0 1435 aa9.69□□□□□ -0.86
MSH6-211ENST00000606499 CNBD1Q8NA66 436 aa9.69□□□□□ -0.86
MSH6-211ENST00000606499 SGIP1Q9BQI5 828 aa9.69□□□□□ -0.86
MSH6-211ENST00000606499 UTP14AQ9BVJ6 771 aaKnown RBP9.69□□□□□ -0.86
MSH6-211ENST00000606499 NYXQ9GZU5 481 aa9.69□□□□□ -0.86
MSH6-211ENST00000606499 USP44Q9H0E7 712 aa9.69□□□□□ -0.86
MSH6-211ENST00000606499 C9orf78Q9NZ63 289 aaPredicted RBP9.69□□□□□ -0.86
MSH6-211ENST00000606499 COL4A1P02462 1669 aa9.68□□□□□ -0.86
MSH6-211ENST00000606499 RIC1Q4ADV7 1423 aa9.68□□□□□ -0.86
MSH6-211ENST00000606499 UTYO14607 1347 aa9.68□□□□□ -0.86
MSH6-211ENST00000606499 SH3TC1Q8TE82 1336 aa9.68□□□□□ -0.86
MSH6-211ENST00000606499 H7C1W4 665 aa9.68□□□□□ -0.86
MSH6-211ENST00000606499 NPHP1O15259 732 aa9.68□□□□□ -0.86
MSH6-211ENST00000606499 PTGER2P43116 358 aa9.68□□□□□ -0.86
MSH6-211ENST00000606499 CASP7P55210 303 aa9.68□□□□□ -0.86
MSH6-211ENST00000606499 ZBTB38Q8NAP3 1195 aaPredicted RBP9.68□□□□□ -0.86
MSH6-211ENST00000606499 DDX19BQ9UMR2 479 aa9.68□□□□□ -0.86
MSH6-211ENST00000606499 TAF1P21675 1872 aa9.68□□□□□ -0.86
MSH6-211ENST00000606499 CDHR2Q9BYE9 1310 aa9.67□□□□□ -0.86
MSH6-211ENST00000606499 IRS4O14654 1257 aaPredicted RBP9.67□□□□□ -0.86
MSH6-211ENST00000606499 ZBTB7BO15156 539 aaPredicted RBP9.67□□□□□ -0.86
MSH6-211ENST00000606499 UBTFL1P0CB47 393 aaPredicted RBP9.67□□□□□ -0.86
MSH6-211ENST00000606499 HCLS1P14317 486 aaPredicted RBP9.67□□□□□ -0.86
MSH6-211ENST00000606499 POLD1P28340 1107 aa9.67□□□□□ -0.86
MSH6-211ENST00000606499 GTF2E1P29083 439 aaPredicted RBP9.67□□□□□ -0.86
MSH6-211ENST00000606499 TPTE2Q6XPS3 522 aa9.67□□□□□ -0.86
MSH6-211ENST00000606499 EXOC6Q8TAG9 804 aa9.67□□□□□ -0.86
MSH6-211ENST00000606499 SUCLG2Q96I99 432 aa9.67□□□□□ -0.86
MSH6-211ENST00000606499 C1orf115Q9H7X2 142 aa9.67□□□□□ -0.86
MSH6-211ENST00000606499 SPON1Q9HCB6 807 aa9.67□□□□□ -0.86
MSH6-211ENST00000606499 GNAI3P08754 354 aa9.66□□□□□ -0.86
MSH6-211ENST00000606499 ST5P78524 1137 aa9.66□□□□□ -0.86
MSH6-211ENST00000606499 EPHA10Q5JZY3 1008 aa9.66□□□□□ -0.86
MSH6-211ENST00000606499 C3orf67Q6ZVT6 689 aa9.66□□□□□ -0.86
MSH6-211ENST00000606499 KAZALD1Q96I82 304 aa9.66□□□□□ -0.86
MSH6-211ENST00000606499 LRRFIP2Q9Y608 721 aaKnown RBP9.66□□□□□ -0.86
MSH6-211ENST00000606499 BRCA1P38398 1863 aaKnown RBP9.66□□□□□ -0.86
MSH6-211ENST00000606499 A0A1B0GUL6 1792 aa9.65□□□□□ -0.86
MSH6-211ENST00000606499 FOXO4P98177 505 aa9.65□□□□□ -0.86
MSH6-211ENST00000606499 BICC1Q9H694 974 aaKnown RBP9.65□□□□□ -0.86
MSH6-211ENST00000606499 ZBTB40Q9NUA8 1239 aa9.65□□□□□ -0.86
MSH6-211ENST00000606499 PDE8AO60658 829 aa9.64□□□□□ -0.87
MSH6-211ENST00000606499 NPM3O75607 178 aaKnown RBP9.64□□□□□ -0.87
MSH6-211ENST00000606499 GNAI2P04899 355 aa9.64□□□□□ -0.87
MSH6-211ENST00000606499 CTSWP56202 376 aa9.64□□□□□ -0.87
MSH6-211ENST00000606499 SLC10A5Q5PT55 438 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms