RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 HCN2Q9UL51 889 aa5.51□□□□□ -1.53
HMGB1P50-201ENST00000605814 CLIP1P30622 1438 aa5.5□□□□□ -1.53
HMGB1P50-201ENST00000605814 RRBP1Q9P2E9 1410 aaKnown RBP5.5□□□□□ -1.53
HMGB1P50-201ENST00000605814 SFI1A8K8P3 1242 aa5.5□□□□□ -1.53
HMGB1P50-201ENST00000605814 ALBP02768 609 aa5.5□□□□□ -1.53
HMGB1P50-201ENST00000605814 ITGAEP38570 1179 aa5.5□□□□□ -1.53
HMGB1P50-201ENST00000605814 GRIK4Q16099 956 aa5.5□□□□□ -1.53
HMGB1P50-201ENST00000605814 HIF1AQ16665 826 aa5.5□□□□□ -1.53
HMGB1P50-201ENST00000605814 RSPO4Q2I0M5 234 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P50-201ENST00000605814 HSH2DQ96JZ2 352 aa5.5□□□□□ -1.53
HMGB1P50-201ENST00000605814 PSMG3-AS1Q96PY0 264 aa5.5□□□□□ -1.53
HMGB1P50-201ENST00000605814 KCNH4Q9UQ05 1017 aa5.5□□□□□ -1.53
HMGB1P50-201ENST00000605814 HCN4Q9Y3Q4 1203 aa5.5□□□□□ -1.53
HMGB1P50-201ENST00000605814 BAZ1AQ9NRL2 1556 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P50-201ENST00000605814 C9orf172C9J069 976 aa5.49□□□□□ -1.53
HMGB1P50-201ENST00000605814 ANP32CO43423 234 aa5.49□□□□□ -1.53
HMGB1P50-201ENST00000605814 DYRK3O43781 588 aa5.49□□□□□ -1.53
HMGB1P50-201ENST00000605814 CCDC102BQ68D86 513 aa5.49□□□□□ -1.53
HMGB1P50-201ENST00000605814 C8orf86Q6ZUL3 223 aa5.49□□□□□ -1.53
HMGB1P50-201ENST00000605814 MICALL1Q8N3F8 863 aa5.49□□□□□ -1.53
HMGB1P50-201ENST00000605814 PHACTR1Q9C0D0 580 aa5.49□□□□□ -1.53
HMGB1P50-201ENST00000605814 JPH1Q9HDC5 661 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P50-201ENST00000605814 ZFP64Q9NPA5 681 aa5.49□□□□□ -1.53
HMGB1P50-201ENST00000605814 USP21Q9UK80 565 aa5.49□□□□□ -1.53
HMGB1P50-201ENST00000605814 COG6Q9Y2V7 657 aa5.49□□□□□ -1.53
HMGB1P50-201ENST00000605814 NACADO15069 1562 aa5.48□□□□□ -1.53
HMGB1P50-201ENST00000605814 CCDC88BA6NC98 1476 aa5.48□□□□□ -1.53
HMGB1P50-201ENST00000605814 PPM1GO15355 546 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P50-201ENST00000605814 PPP1R12BO60237 982 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P50-201ENST00000605814 SH3PXD2AQ5TCZ1 1133 aa5.48□□□□□ -1.53
HMGB1P50-201ENST00000605814 C1orf53Q5VUE5 145 aa5.48□□□□□ -1.53
HMGB1P50-201ENST00000605814 PKNOX2Q96KN3 472 aa5.48□□□□□ -1.53
HMGB1P50-201ENST00000605814 TSPAN10Q9H1Z9 355 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P50-201ENST00000605814 PRDM6Q9NQX0 595 aa5.48□□□□□ -1.53
HMGB1P50-201ENST00000605814 MROH2BQ7Z745 1585 aa5.47□□□□□ -1.53
HMGB1P50-201ENST00000605814 USP17L3A6NCW0 530 aa5.47□□□□□ -1.53
HMGB1P50-201ENST00000605814 USP17L4A6NCW7 530 aa5.47□□□□□ -1.53
HMGB1P50-201ENST00000605814 UBTFP17480 764 aaKnown RBP5.47□□□□□ -1.53
HMGB1P50-201ENST00000605814 ITGB7P26010 798 aa5.47□□□□□ -1.53
HMGB1P50-201ENST00000605814 EPHA4P54764 986 aa5.47□□□□□ -1.53
HMGB1P50-201ENST00000605814 NRG1Q02297 640 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P50-201ENST00000605814 GLIPR1L2Q4G1C9 344 aa5.47□□□□□ -1.53
HMGB1P50-201ENST00000605814 NKAPLQ5M9Q1 402 aa5.47□□□□□ -1.53
HMGB1P50-201ENST00000605814 USP17L2Q6R6M4 530 aa5.47□□□□□ -1.53
HMGB1P50-201ENST00000605814 USP17L1Q7RTZ2 530 aa5.47□□□□□ -1.53
HMGB1P50-201ENST00000605814 CHMP7Q8WUX9 453 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P50-201ENST00000605814 NUDT8Q8WV74 236 aa5.47□□□□□ -1.53
HMGB1P50-201ENST00000605814 NGLY1Q96IV0 654 aa5.47□□□□□ -1.53
HMGB1P50-201ENST00000605814 ALG2Q9H553 416 aa5.47□□□□□ -1.53
HMGB1P50-201ENST00000605814 SOGA1O94964 1423 aa5.47□□□□□ -1.53
HMGB1P50-201ENST00000605814 NCAPD3P42695 1498 aa5.46□□□□□ -1.53
HMGB1P50-201ENST00000605814 NID1P14543 1247 aa5.46□□□□□ -1.54
HMGB1P50-201ENST00000605814 ELNP15502 786 aa5.46□□□□□ -1.54
HMGB1P50-201ENST00000605814 TYRO3Q06418 890 aa5.46□□□□□ -1.54
HMGB1P50-201ENST00000605814 DDX10Q13206 875 aaKnown RBP5.46□□□□□ -1.54
HMGB1P50-201ENST00000605814 PRSS36Q5K4E3 855 aa5.46□□□□□ -1.54
HMGB1P50-201ENST00000605814 ZNF594Q96JF6 807 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P50-201ENST00000605814 SUSD3Q96L08 255 aa5.46□□□□□ -1.54
HMGB1P50-201ENST00000605814 SLC6A14Q9UN76 642 aa5.46□□□□□ -1.54
HMGB1P50-201ENST00000605814 STARD13Q9Y3M8 1113 aa5.46□□□□□ -1.54
HMGB1P50-201ENST00000605814 SMARCA2P51531 1590 aa5.46□□□□□ -1.54
HMGB1P50-201ENST00000605814 ABCC8Q09428 1581 aa5.46□□□□□ -1.54
HMGB1P50-201ENST00000605814 RNF123Q5XPI4 1314 aa5.46□□□□□ -1.54
HMGB1P50-201ENST00000605814 WIZO95785 1651 aa5.45□□□□□ -1.54
HMGB1P50-201ENST00000605814 A0A0A0MRY4 1105 aa5.45□□□□□ -1.54
HMGB1P50-201ENST00000605814 PALM3A6NDB9 673 aaPredicted RBP5.45□□□□□ -1.54
HMGB1P50-201ENST00000605814 EPB42P16452 691 aa5.45□□□□□ -1.54
HMGB1P50-201ENST00000605814 ANP32AP39687 249 aaKnown RBP5.45□□□□□ -1.54
HMGB1P50-201ENST00000605814 TXNRD3Q86VQ6 643 aa5.45□□□□□ -1.54
HMGB1P50-201ENST00000605814 FAM43AQ8N2R8 423 aa5.45□□□□□ -1.54
HMGB1P50-201ENST00000605814 OGFOD1Q8N543 542 aa5.45□□□□□ -1.54
HMGB1P50-201ENST00000605814 TP53INP1Q96A56 240 aa5.45□□□□□ -1.54
HMGB1P50-201ENST00000605814 RGS9O75916 674 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P50-201ENST00000605814 HIRAP54198 1017 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P50-201ENST00000605814 KCNQ4P56696 695 aa5.44□□□□□ -1.54
HMGB1P50-201ENST00000605814 MBTPS1Q14703 1052 aa5.44□□□□□ -1.54
HMGB1P50-201ENST00000605814 ARTNQ5T4W7 220 aa5.44□□□□□ -1.54
HMGB1P50-201ENST00000605814 PSAPL1Q6NUJ1 521 aa5.44□□□□□ -1.54
HMGB1P50-201ENST00000605814 BTLAQ7Z6A9 289 aa5.44□□□□□ -1.54
HMGB1P50-201ENST00000605814 PLEKHM2Q8IWE5 1019 aa5.44□□□□□ -1.54
HMGB1P50-201ENST00000605814 ALDH16A1Q8IZ83 802 aa5.44□□□□□ -1.54
HMGB1P50-201ENST00000605814 LARGE2Q8N3Y3 721 aa5.44□□□□□ -1.54
HMGB1P50-201ENST00000605814 TSEN2Q8NCE0 465 aaKnown RBP5.44□□□□□ -1.54
HMGB1P50-201ENST00000605814 ZNF280CQ8ND82 737 aa5.44□□□□□ -1.54
HMGB1P50-201ENST00000605814 MDFIQ99750 246 aa5.44□□□□□ -1.54
HMGB1P50-201ENST00000605814 KRTAP4-8Q9BYQ9 185 aa5.44□□□□□ -1.54
HMGB1P50-201ENST00000605814 MKRN1Q9UHC7 482 aaKnown RBP5.44□□□□□ -1.54
HMGB1P50-201ENST00000605814 KIAA1024Q9UPX6 916 aa5.44□□□□□ -1.54
HMGB1P50-201ENST00000605814 M0R2N6 131 aa5.43□□□□□ -1.54
HMGB1P50-201ENST00000605814 ATP9BO43861 1147 aa5.43□□□□□ -1.54
HMGB1P50-201ENST00000605814 PCSK7Q16549 785 aa5.43□□□□□ -1.54
HMGB1P50-201ENST00000605814 SCG3Q8WXD2 468 aaKnown RBP5.43□□□□□ -1.54
HMGB1P50-201ENST00000605814 POM121Q96HA1 1249 aa5.43□□□□□ -1.54
HMGB1P50-201ENST00000605814 EFCC1Q9HA90 598 aa5.43□□□□□ -1.54
HMGB1P50-201ENST00000605814 DNAJB12Q9NXW2 375 aaKnown RBP5.43□□□□□ -1.54
HMGB1P50-201ENST00000605814 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P50-201ENST00000605814 CECR2Q9BXF3 1484 aa5.43□□□□□ -1.54
HMGB1P50-201ENST00000605814 MAPKBP1O60336 1514 aa5.43□□□□□ -1.54
HMGB1P50-201ENST00000605814 MAP3K1Q13233 1512 aa5.43□□□□□ -1.54
HMGB1P50-201ENST00000605814 WDR97A6NE52 1622 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms