RNA–Protein interactions for RNA: ENST00000604609.2

GDF15-205, Transcript of growth differentiation factor 15, human

TSL 3

Gene GDF15, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GDF15-205	ENST00000604609	LINS1	Q8NG48	757 aa		12.52	□□□□□ -0.41
GDF15-205	ENST00000604609	API5	Q9BZZ5	524 aa	Known RBP	12.52	□□□□□ -0.41
GDF15-205	ENST00000604609	PPP1R1B	Q9UD71	204 aa	Predicted RBP	12.52	□□□□□ -0.41
GDF15-205	ENST00000604609	TRMT112	Q9UI30	125 aa	Known RBP	12.52	□□□□□ -0.41
GDF15-205	ENST00000604609	SUPT16H	Q9Y5B9	1047 aa	Known RBP	12.52	□□□□□ -0.41
GDF15-205	ENST00000604609	NBPF7	P0C2Y1	421 aa	Predicted RBP	12.51	□□□□□ -0.41
GDF15-205	ENST00000604609	POLD1	P28340	1107 aa		12.51	□□□□□ -0.41
GDF15-205	ENST00000604609	CASP7	P55210	303 aa		12.51	□□□□□ -0.41
GDF15-205	ENST00000604609	IRX6	P78412	446 aa	Predicted RBP	12.51	□□□□□ -0.41
GDF15-205	ENST00000604609	HSP90AB3P	Q58FF7	597 aa		12.51	□□□□□ -0.41
GDF15-205	ENST00000604609	CNBD1	Q8NA66	436 aa		12.51	□□□□□ -0.41
GDF15-205	ENST00000604609	ARHGAP45	Q92619	1136 aa		12.51	□□□□□ -0.41
GDF15-205	ENST00000604609	UTP14A	Q9BVJ6	771 aa	Known RBP	12.51	□□□□□ -0.41
GDF15-205	ENST00000604609	SRCIN1	Q9C0H9	1055 aa		12.51	□□□□□ -0.41
GDF15-205	ENST00000604609	CWC25	Q9NXE8	425 aa	Predicted RBP	12.51	□□□□□ -0.41
GDF15-205	ENST00000604609	RGL2	O15211	777 aa		12.5	□□□□□ -0.41
GDF15-205	ENST00000604609	CHRNA5	P30532	468 aa		12.5	□□□□□ -0.41
GDF15-205	ENST00000604609	NEXN	Q0ZGT2	675 aa		12.5	□□□□□ -0.41
GDF15-205	ENST00000604609	TRIM28	Q13263	835 aa	Known RBP	12.5	□□□□□ -0.41
GDF15-205	ENST00000604609	EPHA10	Q5JZY3	1008 aa		12.5	□□□□□ -0.41
GDF15-205	ENST00000604609	UBE3B	Q7Z3V4	1068 aa		12.5	□□□□□ -0.41
GDF15-205	ENST00000604609	CCDC85A	Q96PX6	553 aa	Predicted RBP	12.5	□□□□□ -0.41
GDF15-205	ENST00000604609	MEIS3	Q99687	375 aa		12.5	□□□□□ -0.41
GDF15-205	ENST00000604609	COG6	Q9Y2V7	657 aa		12.5	□□□□□ -0.41
GDF15-205	ENST00000604609	C10orf71	Q711Q0	1435 aa		12.49	□□□□□ -0.41
GDF15-205	ENST00000604609	IPO8	O15397	1037 aa	Known RBP	12.49	□□□□□ -0.41
GDF15-205	ENST00000604609	PARP10	Q53GL7	1025 aa		12.49	□□□□□ -0.41
GDF15-205	ENST00000604609	INTS3	Q68E01	1043 aa	Known RBP	12.49	□□□□□ -0.41
GDF15-205	ENST00000604609	DZIP1L	Q8IYY4	767 aa	Known RBP	12.49	□□□□□ -0.41
GDF15-205	ENST00000604609	CCDC191	Q8NCU4	936 aa		12.49	□□□□□ -0.41
GDF15-205	ENST00000604609	KAZALD1	Q96I82	304 aa		12.49	□□□□□ -0.41
GDF15-205	ENST00000604609	FHDC1	Q9C0D6	1143 aa	Predicted RBP	12.49	□□□□□ -0.41
GDF15-205	ENST00000604609	USP44	Q9H0E7	712 aa		12.49	□□□□□ -0.41
GDF15-205	ENST00000604609	ARFGEF2	Q9Y6D5	1785 aa		12.48	□□□□□ -0.41
GDF15-205	ENST00000604609	RNF123	Q5XPI4	1314 aa		12.48	□□□□□ -0.41
GDF15-205	ENST00000604609	SH3TC1	Q8TE82	1336 aa		12.48	□□□□□ -0.41
GDF15-205	ENST00000604609		H7C1W4	665 aa		12.48	□□□□□ -0.41
GDF15-205	ENST00000604609	ALDH1L1	O75891	902 aa		12.48	□□□□□ -0.41
GDF15-205	ENST00000604609	ITPRIP	Q8IWB1	547 aa		12.48	□□□□□ -0.41
GDF15-205	ENST00000604609	FTSJ3	Q8IY81	847 aa	Known RBP	12.48	□□□□□ -0.41
GDF15-205	ENST00000604609	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	12.48	□□□□□ -0.41
GDF15-205	ENST00000604609	SUCLG2	Q96I99	432 aa		12.48	□□□□□ -0.41
GDF15-205	ENST00000604609	C1orf115	Q9H7X2	142 aa		12.48	□□□□□ -0.41
GDF15-205	ENST00000604609		A0A0G2JLW4	131 aa		12.47	□□□□□ -0.41
GDF15-205	ENST00000604609	GRM8	O00222	908 aa		12.47	□□□□□ -0.41
GDF15-205	ENST00000604609	IRS4	O14654	1257 aa	Predicted RBP	12.47	□□□□□ -0.41
GDF15-205	ENST00000604609	NPHP1	O15259	732 aa		12.47	□□□□□ -0.41
GDF15-205	ENST00000604609	PCCA	P05165	728 aa	Predicted RBP	12.47	□□□□□ -0.41
GDF15-205	ENST00000604609	DPEP1	P16444	411 aa		12.47	□□□□□ -0.41
GDF15-205	ENST00000604609	GTF2E1	P29083	439 aa	Predicted RBP	12.47	□□□□□ -0.41
GDF15-205	ENST00000604609	CCT4	P50991	539 aa	Known RBP	12.47	□□□□□ -0.41
GDF15-205	ENST00000604609	TPTE2	Q6XPS3	522 aa		12.47	□□□□□ -0.41
GDF15-205	ENST00000604609	PPP1R42	Q7Z4L9	355 aa		12.47	□□□□□ -0.41
GDF15-205	ENST00000604609	LRP5	O75197	1615 aa		12.47	□□□□□ -0.41
GDF15-205	ENST00000604609	PXDNL	A1KZ92	1463 aa		12.46	□□□□□ -0.41
GDF15-205	ENST00000604609	IBTK	Q9P2D0	1353 aa	Predicted RBP	12.46	□□□□□ -0.41
GDF15-205	ENST00000604609	COL24A1	Q17RW2	1714 aa		12.46	□□□□□ -0.41
GDF15-205	ENST00000604609	TNRC6C	Q9HCJ0	1690 aa	Known RBP	12.46	□□□□□ -0.41
GDF15-205	ENST00000604609	CRBN	Q96SW2	442 aa		12.46	□□□□□ -0.41
GDF15-205	ENST00000604609	COL4A1	P02462	1669 aa		12.45	□□□□□ -0.42
GDF15-205	ENST00000604609	KCNA3	P22001	575 aa		12.45	□□□□□ -0.42
GDF15-205	ENST00000604609	ST5	P78524	1137 aa		12.45	□□□□□ -0.42
GDF15-205	ENST00000604609	FOXO4	P98177	505 aa		12.45	□□□□□ -0.42
GDF15-205	ENST00000604609	SLC10A5	Q5PT55	438 aa		12.45	□□□□□ -0.42
GDF15-205	ENST00000604609	C2CD5	Q86YS7	1000 aa		12.45	□□□□□ -0.42
GDF15-205	ENST00000604609	SYT17	Q9BSW7	474 aa		12.45	□□□□□ -0.42
GDF15-205	ENST00000604609	NYX	Q9GZU5	481 aa		12.45	□□□□□ -0.42
GDF15-205	ENST00000604609	C9orf78	Q9NZ63	289 aa	Predicted RBP	12.45	□□□□□ -0.42
GDF15-205	ENST00000604609	UTY	O14607	1347 aa		12.44	□□□□□ -0.42
GDF15-205	ENST00000604609	ZBTB7B	O15156	539 aa	Predicted RBP	12.44	□□□□□ -0.42
GDF15-205	ENST00000604609	MVP	Q14764	893 aa	Known RBP	12.44	□□□□□ -0.42
GDF15-205	ENST00000604609	OLFM4	Q6UX06	510 aa		12.44	□□□□□ -0.42
GDF15-205	ENST00000604609	ANKRD44	Q8N8A2	993 aa		12.44	□□□□□ -0.42
GDF15-205	ENST00000604609	BRIP1	Q9BX63	1249 aa		12.44	□□□□□ -0.42
GDF15-205	ENST00000604609	BICC1	Q9H694	974 aa	Known RBP	12.44	□□□□□ -0.42
GDF15-205	ENST00000604609	SEC31B	Q9NQW1	1179 aa		12.44	□□□□□ -0.42
GDF15-205	ENST00000604609	LRRFIP2	Q9Y608	721 aa	Known RBP	12.44	□□□□□ -0.42
GDF15-205	ENST00000604609	CDHR2	Q9BYE9	1310 aa		12.43	□□□□□ -0.42
GDF15-205	ENST00000604609	KLRG2	A4D1S0	409 aa	Predicted RBP	12.43	□□□□□ -0.42
GDF15-205	ENST00000604609	FAM161A	Q3B820	660 aa		12.43	□□□□□ -0.42
GDF15-205	ENST00000604609	GREM2	Q9H772	168 aa		12.43	□□□□□ -0.42
GDF15-205	ENST00000604609	NRXN2	Q9P2S2	1712 aa		12.42	□□□□□ -0.42
GDF15-205	ENST00000604609	SRGN	P10124	158 aa		12.42	□□□□□ -0.42
GDF15-205	ENST00000604609	CTSW	P56202	376 aa		12.42	□□□□□ -0.42
GDF15-205	ENST00000604609	PDE3A	Q14432	1141 aa		12.42	□□□□□ -0.42
GDF15-205	ENST00000604609	CRY2	Q49AN0	593 aa		12.42	□□□□□ -0.42
GDF15-205	ENST00000604609	TTLL11	Q8NHH1	800 aa		12.42	□□□□□ -0.42
GDF15-205	ENST00000604609	EXOC6	Q8TAG9	804 aa		12.42	□□□□□ -0.42
GDF15-205	ENST00000604609	ZNF219	Q9P2Y4	722 aa	Predicted RBP	12.42	□□□□□ -0.42
GDF15-205	ENST00000604609	CD2AP	Q9Y5K6	639 aa		12.42	□□□□□ -0.42
GDF15-205	ENST00000604609	NUP98	P52948	1817 aa		12.41	□□□□□ -0.42
GDF15-205	ENST00000604609	PDE8A	O60658	829 aa		12.41	□□□□□ -0.42
GDF15-205	ENST00000604609	UBTFL1	P0CB47	393 aa	Predicted RBP	12.41	□□□□□ -0.42
GDF15-205	ENST00000604609	LMBR1L	Q6UX01	489 aa		12.41	□□□□□ -0.42
GDF15-205	ENST00000604609	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	12.41	□□□□□ -0.42
GDF15-205	ENST00000604609	KLHDC4	Q8TBB5	520 aa		12.41	□□□□□ -0.42
GDF15-205	ENST00000604609	CELF1	Q92879	486 aa	Known RBP	12.41	□□□□□ -0.42
GDF15-205	ENST00000604609	ZNF622	Q969S3	477 aa	Known RBP eCLIP	12.41	□□□□□ -0.42
GDF15-205	ENST00000604609	ZNF594	Q96JF6	807 aa	Predicted RBP	12.41	□□□□□ -0.42
GDF15-205	ENST00000604609	SF3B3	Q15393	1217 aa	Known RBP	12.4	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms