RNA–Protein interactions for RNA: ENST00000603043.1

CDCA3-211, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 1,995 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-211ENST00000603043 NUTM1Q86Y26 1132 aa19.81■□□□□ 0.76
CDCA3-211ENST00000603043 NLGN2Q8NFZ4 835 aa19.81■□□□□ 0.76
CDCA3-211ENST00000603043 KIF16BQ96L93 1317 aa19.8■□□□□ 0.76
CDCA3-211ENST00000603043 BCAR3O75815 825 aa19.8■□□□□ 0.76
CDCA3-211ENST00000603043 BRIP1Q9BX63 1249 aa19.8■□□□□ 0.76
CDCA3-211ENST00000603043 PXDNLA1KZ92 1463 aa19.79■□□□□ 0.76
CDCA3-211ENST00000603043 IGKV5-2P06315 115 aa19.79■□□□□ 0.76
CDCA3-211ENST00000603043 CCDC191Q8NCU4 936 aa19.79■□□□□ 0.76
CDCA3-211ENST00000603043 TRMT112Q9UI30 125 aaKnown RBP19.79■□□□□ 0.76
CDCA3-211ENST00000603043 NOB1Q9ULX3 412 aaKnown RBP19.79■□□□□ 0.76
CDCA3-211ENST00000603043 RNF123Q5XPI4 1314 aa19.79■□□□□ 0.76
CDCA3-211ENST00000603043 GOLGB1Q14789 3259 aaKnown RBP19.79■□□□□ 0.76
CDCA3-211ENST00000603043 TGFB2P61812 414 aa19.79■□□□□ 0.76
CDCA3-211ENST00000603043 ERFEQ4G0M1 354 aa19.79■□□□□ 0.76
CDCA3-211ENST00000603043 CWC25Q9NXE8 425 aaPredicted RBP19.79■□□□□ 0.76
CDCA3-211ENST00000603043 ABCC12Q96J65 1359 aa19.78■□□□□ 0.76
CDCA3-211ENST00000603043 CWF19L2Q2TBE0 894 aaKnown RBP19.78■□□□□ 0.76
CDCA3-211ENST00000603043 SLC4A10Q6U841 1118 aa19.78■□□□□ 0.76
CDCA3-211ENST00000603043 LINS1Q8NG48 757 aa19.78■□□□□ 0.76
CDCA3-211ENST00000603043 SH3TC1Q8TE82 1336 aa19.78■□□□□ 0.76
CDCA3-211ENST00000603043 TNRC6CQ9HCJ0 1690 aaKnown RBP19.78■□□□□ 0.76
CDCA3-211ENST00000603043 DLEC1Q9Y238 1755 aa19.78■□□□□ 0.76
CDCA3-211ENST00000603043 COL11A2P13942 1736 aaPredicted RBP19.77■□□□□ 0.76
CDCA3-211ENST00000603043 BRCA1P38398 1863 aaKnown RBP19.77■□□□□ 0.76
CDCA3-211ENST00000603043 NEURL1BA8MQ27 555 aa19.77■□□□□ 0.75
CDCA3-211ENST00000603043 PDE6BP35913 854 aa19.77■□□□□ 0.75
CDCA3-211ENST00000603043 A0A0G2JLW4 131 aa19.76■□□□□ 0.75
CDCA3-211ENST00000603043 BEND3Q5T5X7 828 aa19.76■□□□□ 0.75
CDCA3-211ENST00000603043 RIC1Q4ADV7 1423 aa19.76■□□□□ 0.75
CDCA3-211ENST00000603043 DDX60Q8IY21 1712 aaKnown RBP19.76■□□□□ 0.75
CDCA3-211ENST00000603043 LAMB2P55268 1798 aa19.76■□□□□ 0.75
CDCA3-211ENST00000603043 DPEP1P16444 411 aa19.75■□□□□ 0.75
CDCA3-211ENST00000603043 ZBTB38Q8NAP3 1195 aaPredicted RBP19.75■□□□□ 0.75
CDCA3-211ENST00000603043 FRAT1Q92837 279 aaPredicted RBP19.75■□□□□ 0.75
CDCA3-211ENST00000603043 FAM89AQ96GI7 184 aa19.75■□□□□ 0.75
CDCA3-211ENST00000603043 CHRNA5P30532 468 aa19.75■□□□□ 0.75
CDCA3-211ENST00000603043 RTL5Q5HYW3 569 aaPredicted RBP19.75■□□□□ 0.75
CDCA3-211ENST00000603043 SYNE4Q8N205 404 aa19.75■□□□□ 0.75
CDCA3-211ENST00000603043 ARHGAP45Q92619 1136 aa19.75■□□□□ 0.75
CDCA3-211ENST00000603043 API5Q9BZZ5 524 aaKnown RBP19.75■□□□□ 0.75
CDCA3-211ENST00000603043 IPO8O15397 1037 aaKnown RBP19.74■□□□□ 0.75
CDCA3-211ENST00000603043 RCAN3Q9UKA8 241 aa19.74■□□□□ 0.75
CDCA3-211ENST00000603043 H0YIN7 160 aa19.74■□□□□ 0.75
CDCA3-211ENST00000603043 GCKRQ14397 625 aa19.74■□□□□ 0.75
CDCA3-211ENST00000603043 C2CD5Q86YS7 1000 aa19.74■□□□□ 0.75
CDCA3-211ENST00000603043 SRCIN1Q9C0H9 1055 aa19.74■□□□□ 0.75
CDCA3-211ENST00000603043 PDZRN3Q9UPQ7 1066 aa19.74■□□□□ 0.75
CDCA3-211ENST00000603043 PCCAP05165 728 aaPredicted RBP19.73■□□□□ 0.75
CDCA3-211ENST00000603043 SLC10A5Q5PT55 438 aa19.73■□□□□ 0.75
CDCA3-211ENST00000603043 HCLS1P14317 486 aaPredicted RBP19.72■□□□□ 0.75
CDCA3-211ENST00000603043 CACNA1SQ13698 1873 aa19.72■□□□□ 0.75
CDCA3-211ENST00000603043 KLRG2A4D1S0 409 aaPredicted RBP19.72■□□□□ 0.75
CDCA3-211ENST00000603043 ALDH1L1O75891 902 aa19.72■□□□□ 0.75
CDCA3-211ENST00000603043 KCNA3P22001 575 aa19.72■□□□□ 0.75
CDCA3-211ENST00000603043 ATF7IPQ6VMQ6 1270 aa19.72■□□□□ 0.75
CDCA3-211ENST00000603043 WWC3Q9ULE0 1092 aa19.72■□□□□ 0.75
CDCA3-211ENST00000603043 MYH3P11055 1940 aa19.71■□□□□ 0.75
CDCA3-211ENST00000603043 IRS4O14654 1257 aaPredicted RBP19.71■□□□□ 0.75
CDCA3-211ENST00000603043 SRGNP10124 158 aa19.71■□□□□ 0.75
CDCA3-211ENST00000603043 TRIM27P14373 513 aa19.71■□□□□ 0.75
CDCA3-211ENST00000603043 ZKSCAN2Q63HK3 967 aa19.71■□□□□ 0.75
CDCA3-211ENST00000603043 JARID2Q92833 1246 aaPredicted RBP19.71■□□□□ 0.75
CDCA3-211ENST00000603043 NLRP3Q96P20 1036 aa19.71■□□□□ 0.75
CDCA3-211ENST00000603043 UBE3BQ7Z3V4 1068 aa19.7■□□□□ 0.74
CDCA3-211ENST00000603043 CRY2Q49AN0 593 aa19.7■□□□□ 0.74
CDCA3-211ENST00000603043 C3orf67Q6ZVT6 689 aa19.7■□□□□ 0.74
CDCA3-211ENST00000603043 PIM2Q9P1W9 311 aa19.7■□□□□ 0.74
CDCA3-211ENST00000603043 ABCC4O15439 1325 aa19.69■□□□□ 0.74
CDCA3-211ENST00000603043 CDHR2Q9BYE9 1310 aa19.69■□□□□ 0.74
CDCA3-211ENST00000603043 H7C1W4 665 aa19.69■□□□□ 0.74
CDCA3-211ENST00000603043 HSP90B1P14625 803 aaKnown RBP19.69■□□□□ 0.74
CDCA3-211ENST00000603043 MASTLQ96GX5 879 aa19.69■□□□□ 0.74
CDCA3-211ENST00000603043 UTRNP46939 3433 aa19.68■□□□□ 0.74
CDCA3-211ENST00000603043 CCT4P50991 539 aaKnown RBP19.68■□□□□ 0.74
CDCA3-211ENST00000603043 ZNF622Q969S3 477 aaKnown RBP eCLIP19.68■□□□□ 0.74
CDCA3-211ENST00000603043 ARFGEF1Q9Y6D6 1849 aa19.68■□□□□ 0.74
CDCA3-211ENST00000603043 GRM8O00222 908 aa19.68■□□□□ 0.74
CDCA3-211ENST00000603043 NPR1P16066 1061 aa19.68■□□□□ 0.74
CDCA3-211ENST00000603043 RPGRQ92834 1020 aaKnown RBP19.68■□□□□ 0.74
CDCA3-211ENST00000603043 CLUAP1Q96AJ1 413 aa19.68■□□□□ 0.74
CDCA3-211ENST00000603043 C9orf78Q9NZ63 289 aaPredicted RBP19.68■□□□□ 0.74
CDCA3-211ENST00000603043 STYK1Q6J9G0 422 aa19.67■□□□□ 0.74
CDCA3-211ENST00000603043 TNNQ9UQP3 1299 aa19.67■□□□□ 0.74
CDCA3-211ENST00000603043 CASP7P55210 303 aa19.66■□□□□ 0.74
CDCA3-211ENST00000603043 PDE8AO60658 829 aa19.66■□□□□ 0.74
CDCA3-211ENST00000603043 DALRD3Q5D0E6 543 aaKnown RBP19.66■□□□□ 0.74
CDCA3-211ENST00000603043 TTLL6Q8N841 843 aa19.66■□□□□ 0.74
CDCA3-211ENST00000603043 BCS1LQ9Y276 419 aa19.66■□□□□ 0.74
CDCA3-211ENST00000603043 SLX4Q8IY92 1834 aa19.66■□□□□ 0.74
CDCA3-211ENST00000603043 GPR162Q16538 588 aa19.65■□□□□ 0.74
CDCA3-211ENST00000603043 CNKSR1Q969H4 720 aa19.65■□□□□ 0.74
CDCA3-211ENST00000603043 TAF1P21675 1872 aa19.64■□□□□ 0.74
CDCA3-211ENST00000603043 INTS3Q68E01 1043 aaKnown RBP19.64■□□□□ 0.74
CDCA3-211ENST00000603043 FTSJ3Q8IY81 847 aaKnown RBP19.64■□□□□ 0.74
CDCA3-211ENST00000603043 DCAF8L1A6NGE4 600 aa19.64■□□□□ 0.73
CDCA3-211ENST00000603043 YBX3P16989 372 aaKnown RBP eCLIP19.64■□□□□ 0.73
CDCA3-211ENST00000603043 HOXA10P31260 410 aaPredicted RBP19.64■□□□□ 0.73
CDCA3-211ENST00000603043 SF3B3Q15393 1217 aaKnown RBP19.64■□□□□ 0.73
CDCA3-211ENST00000603043 RBM17Q96I25 401 aaKnown RBP19.64■□□□□ 0.73
CDCA3-211ENST00000603043 NBPF7P0C2Y1 421 aaPredicted RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms