RNA–Protein interactions for RNA: ENST00000602171.5

FARP1-239, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-239ENST00000602171 NR6A1Q15406 480 aa10.27□□□□□ -0.77
FARP1-239ENST00000602171 Q6ZVU0 165 aa10.27□□□□□ -0.77
FARP1-239ENST00000602171 TESK2Q96S53 571 aa10.27□□□□□ -0.77
FARP1-239ENST00000602171 FAM117AQ9C073 453 aa10.27□□□□□ -0.77
FARP1-239ENST00000602171 ATAD2Q6PL18 1390 aa10.26□□□□□ -0.77
FARP1-239ENST00000602171 QRICH2Q9H0J4 1663 aa10.26□□□□□ -0.77
FARP1-239ENST00000602171 TTLL8A6PVC2 850 aa10.26□□□□□ -0.77
FARP1-239ENST00000602171 LORP23490 312 aaPredicted RBP10.26□□□□□ -0.77
FARP1-239ENST00000602171 PROCA1Q8NCQ7 364 aaPredicted RBP10.26□□□□□ -0.77
FARP1-239ENST00000602171 DNMT3LQ9UJW3 386 aa10.26□□□□□ -0.77
FARP1-239ENST00000602171 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.26□□□□□ -0.77
FARP1-239ENST00000602171 C1orf167Q5SNV9 1468 aa10.25□□□□□ -0.77
FARP1-239ENST00000602171 NALCNQ8IZF0 1738 aa10.25□□□□□ -0.77
FARP1-239ENST00000602171 AP1G2O75843 785 aa10.25□□□□□ -0.77
FARP1-239ENST00000602171 ESCO1Q5FWF5 840 aa10.25□□□□□ -0.77
FARP1-239ENST00000602171 NUDT16Q96DE0 195 aaKnown RBP10.25□□□□□ -0.77
FARP1-239ENST00000602171 GPBP1L1Q9HC44 474 aaPredicted RBP10.25□□□□□ -0.77
FARP1-239ENST00000602171 MST1RQ04912 1400 aa10.24□□□□□ -0.77
FARP1-239ENST00000602171 XIRP1Q702N8 1843 aaKnown RBP10.24□□□□□ -0.77
FARP1-239ENST00000602171 TULP4Q9NRJ4 1543 aa10.24□□□□□ -0.77
FARP1-239ENST00000602171 PIP4K2BP78356 416 aa10.24□□□□□ -0.77
FARP1-239ENST00000602171 NBPF20Q3BBV1 942 aa10.24□□□□□ -0.77
FARP1-239ENST00000602171 SPINT1O43278 529 aa10.23□□□□□ -0.77
FARP1-239ENST00000602171 FBXO41Q8TF61 875 aa10.23□□□□□ -0.77
FARP1-239ENST00000602171 NINLQ9Y2I6 1382 aa10.23□□□□□ -0.77
FARP1-239ENST00000602171 BRINP3Q76B58 766 aa10.22□□□□□ -0.77
FARP1-239ENST00000602171 NPHP3Q7Z494 1330 aa10.22□□□□□ -0.77
FARP1-239ENST00000602171 PSME1Q06323 249 aa10.21□□□□□ -0.77
FARP1-239ENST00000602171 NGDNQ8NEJ9 315 aaKnown RBP10.21□□□□□ -0.77
FARP1-239ENST00000602171 ADAM32Q8TC27 787 aa10.21□□□□□ -0.77
FARP1-239ENST00000602171 TMC1Q8TDI8 760 aa10.21□□□□□ -0.77
FARP1-239ENST00000602171 ORAI2Q96SN7 254 aa10.21□□□□□ -0.77
FARP1-239ENST00000602171 ATP7BP35670 1465 aa10.21□□□□□ -0.78
FARP1-239ENST00000602171 FMN2Q9NZ56 1722 aa10.21□□□□□ -0.78
FARP1-239ENST00000602171 CBLBQ13191 982 aa10.2□□□□□ -0.78
FARP1-239ENST00000602171 INTS6LQ5JSJ4 861 aaKnown RBP10.2□□□□□ -0.78
FARP1-239ENST00000602171 PPIP5K1Q6PFW1 1433 aa10.2□□□□□ -0.78
FARP1-239ENST00000602171 POLR3GLQ9BT43 218 aa10.2□□□□□ -0.78
FARP1-239ENST00000602171 PRR36Q9H6K5 1346 aa10.2□□□□□ -0.78
FARP1-239ENST00000602171 GOPCQ9HD26 462 aa10.2□□□□□ -0.78
FARP1-239ENST00000602171 TERF2IPQ9NYB0 399 aa10.2□□□□□ -0.78
FARP1-239ENST00000602171 CABP1Q9NZU7 370 aa10.2□□□□□ -0.78
FARP1-239ENST00000602171 DISP3Q9P2K9 1392 aa10.2□□□□□ -0.78
FARP1-239ENST00000602171 FOXO3O43524 673 aa10.19□□□□□ -0.78
FARP1-239ENST00000602171 PTSQ03393 145 aa10.19□□□□□ -0.78
FARP1-239ENST00000602171 HDGFL2Q7Z4V5 671 aaPredicted RBP10.19□□□□□ -0.78
FARP1-239ENST00000602171 PMFBP1Q8TBY8 1022 aa10.19□□□□□ -0.78
FARP1-239ENST00000602171 BRD4O60885 1362 aaPredicted RBP10.18□□□□□ -0.78
FARP1-239ENST00000602171 USP17L8P0C7I0 530 aa10.18□□□□□ -0.78
FARP1-239ENST00000602171 DZIP3Q86Y13 1208 aaKnown RBP10.18□□□□□ -0.78
FARP1-239ENST00000602171 KIF1AQ12756 1690 aa10.18□□□□□ -0.78
FARP1-239ENST00000602171 POLR3AO14802 1390 aaPredicted RBP10.17□□□□□ -0.78
FARP1-239ENST00000602171 ACEP12821 1306 aa10.17□□□□□ -0.78
FARP1-239ENST00000602171 ITSN1Q15811 1721 aa10.17□□□□□ -0.78
FARP1-239ENST00000602171 KRT28Q7Z3Y7 464 aa10.17□□□□□ -0.78
FARP1-239ENST00000602171 LRRC59Q96AG4 307 aaKnown RBP10.17□□□□□ -0.78
FARP1-239ENST00000602171 OCSTAMPQ9BR26 566 aa10.17□□□□□ -0.78
FARP1-239ENST00000602171 SLC12A5Q9H2X9 1139 aa10.17□□□□□ -0.78
FARP1-239ENST00000602171 ROBO1Q9Y6N7 1651 aa10.16□□□□□ -0.78
FARP1-239ENST00000602171 KIF7Q2M1P5 1343 aa10.16□□□□□ -0.78
FARP1-239ENST00000602171 FIGNL2A6NMB9 653 aa10.16□□□□□ -0.78
FARP1-239ENST00000602171 RFC5P40937 340 aa10.16□□□□□ -0.78
FARP1-239ENST00000602171 TMEM259Q4ZIN3 620 aa10.16□□□□□ -0.78
FARP1-239ENST00000602171 NANOS1Q8WY41 292 aaKnown RBP10.16□□□□□ -0.78
FARP1-239ENST00000602171 PCMTD1Q96MG8 357 aaPredicted RBP10.16□□□□□ -0.78
FARP1-239ENST00000602171 USP32Q8NFA0 1604 aa10.15□□□□□ -0.78
FARP1-239ENST00000602171 SEPT12Q8IYM1 358 aa10.15□□□□□ -0.78
FARP1-239ENST00000602171 SBNO1A3KN83 1393 aa10.14□□□□□ -0.79
FARP1-239ENST00000602171 KTN1Q86UP2 1357 aaKnown RBP10.14□□□□□ -0.79
FARP1-239ENST00000602171 ANKRD36BQ8N2N9 1353 aa10.14□□□□□ -0.79
FARP1-239ENST00000602171 CCDC7Q96M83 1385 aa10.14□□□□□ -0.79
FARP1-239ENST00000602171 RELBQ01201 579 aa10.14□□□□□ -0.79
FARP1-239ENST00000602171 CCDC155Q8N6L0 562 aa10.14□□□□□ -0.79
FARP1-239ENST00000602171 AHDC1Q5TGY3 1603 aaPredicted RBP10.14□□□□□ -0.79
FARP1-239ENST00000602171 WASHC2AQ641Q2 1341 aa10.13□□□□□ -0.79
FARP1-239ENST00000602171 TOPAZ1Q8N9V7 1692 aa10.13□□□□□ -0.79
FARP1-239ENST00000602171 CCDC125Q86Z20 511 aa10.13□□□□□ -0.79
FARP1-239ENST00000602171 EPS8L1Q8TE68 723 aa10.13□□□□□ -0.79
FARP1-239ENST00000602171 HMX1Q9NP08 348 aaPredicted RBP10.13□□□□□ -0.79
FARP1-239ENST00000602171 USP6P35125 1406 aa10.13□□□□□ -0.79
FARP1-239ENST00000602171 CPSF1Q10570 1443 aaKnown RBP10.13□□□□□ -0.79
FARP1-239ENST00000602171 ARHGEF10O15013 1369 aa10.13□□□□□ -0.79
FARP1-239ENST00000602171 TTC21AQ8NDW8 1320 aa10.12□□□□□ -0.79
FARP1-239ENST00000602171 SLC35F4A4IF30 521 aa10.12□□□□□ -0.79
FARP1-239ENST00000602171 HSPA1LP34931 641 aa10.12□□□□□ -0.79
FARP1-239ENST00000602171 XPCQ01831 940 aaPredicted RBP10.12□□□□□ -0.79
FARP1-239ENST00000602171 DDX17Q92841 729 aaKnown RBP10.12□□□□□ -0.79
FARP1-239ENST00000602171 AGBL1Q96MI9 1066 aa10.12□□□□□ -0.79
FARP1-239ENST00000602171 POLMQ9NP87 494 aaPredicted RBP10.12□□□□□ -0.79
FARP1-239ENST00000602171 EDC4Q6P2E9 1401 aaKnown RBP10.12□□□□□ -0.79
FARP1-239ENST00000602171 A0A1W2PP64 1363 aa10.12□□□□□ -0.79
FARP1-239ENST00000602171 SPATA31A3Q5VYP0 1347 aa10.11□□□□□ -0.79
FARP1-239ENST00000602171 TNS3Q68CZ2 1445 aa10.11□□□□□ -0.79
FARP1-239ENST00000602171 ESPNB1AK53 854 aa10.11□□□□□ -0.79
FARP1-239ENST00000602171 ADH1AP07327 375 aa10.11□□□□□ -0.79
FARP1-239ENST00000602171 CTSOP43234 321 aaPredicted RBP10.11□□□□□ -0.79
FARP1-239ENST00000602171 ABTB2Q8N961 1025 aa10.11□□□□□ -0.79
FARP1-239ENST00000602171 ZNF784Q8NCA9 323 aaPredicted RBP10.11□□□□□ -0.79
FARP1-239ENST00000602171 INSM2Q96T92 566 aaPredicted RBP10.11□□□□□ -0.79
FARP1-239ENST00000602171 PANK3Q9H999 370 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms