RNA–Protein interactions for RNA: ENST00000600440.5

SYDE1-204, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SYDE1, Length 3,058 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-204ENST00000600440 IFFO2Q5TF58 517 aa18.9■□□□□ 0.62
SYDE1-204ENST00000600440 PPP1R42Q7Z4L9 355 aa18.9■□□□□ 0.62
SYDE1-204ENST00000600440 ZSCAN31Q96LW9 406 aaPredicted RBP18.9■□□□□ 0.62
SYDE1-204ENST00000600440 ERCC6L2Q5T890 1561 aa18.9■□□□□ 0.62
SYDE1-204ENST00000600440 SLC20A2Q08357 652 aa18.9■□□□□ 0.62
SYDE1-204ENST00000600440 TMC6Q7Z403 805 aa18.9■□□□□ 0.62
SYDE1-204ENST00000600440 TSPYL1Q9H0U9 437 aa18.9■□□□□ 0.62
SYDE1-204ENST00000600440 ARGLU1Q9NWB6 273 aaPredicted RBP18.9■□□□□ 0.62
SYDE1-204ENST00000600440 VPS53Q5VIR6 699 aa18.89■□□□□ 0.62
SYDE1-204ENST00000600440 RHPN1Q8TCX5 695 aa18.89■□□□□ 0.62
SYDE1-204ENST00000600440 TOMM22Q9NS69 142 aa18.89■□□□□ 0.62
SYDE1-204ENST00000600440 FAM53CQ9NYF3 392 aa18.89■□□□□ 0.62
SYDE1-204ENST00000600440 ABCC3O15438 1527 aa18.89■□□□□ 0.62
SYDE1-204ENST00000600440 JAK2O60674 1132 aa18.89■□□□□ 0.61
SYDE1-204ENST00000600440 H2AFXP16104 143 aaPredicted RBP18.89■□□□□ 0.61
SYDE1-204ENST00000600440 OAS2P29728 719 aaKnown RBP18.89■□□□□ 0.61
SYDE1-204ENST00000600440 LMAN1P49257 510 aa18.89■□□□□ 0.61
SYDE1-204ENST00000600440 TPM4P67936 248 aa18.89■□□□□ 0.61
SYDE1-204ENST00000600440 CD163L1Q9NR16 1453 aa18.89■□□□□ 0.61
SYDE1-204ENST00000600440 NPATQ14207 1427 aa18.89■□□□□ 0.61
SYDE1-204ENST00000600440 IFIT2P09913 472 aaKnown RBP18.89■□□□□ 0.61
SYDE1-204ENST00000600440 IDI1Q13907 227 aa18.89■□□□□ 0.61
SYDE1-204ENST00000600440 MLECQ14165 292 aa18.89■□□□□ 0.61
SYDE1-204ENST00000600440 PI4K2BQ8TCG2 481 aa18.89■□□□□ 0.61
SYDE1-204ENST00000600440 PPP6R1Q9UPN7 881 aa18.89■□□□□ 0.61
SYDE1-204ENST00000600440 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.89■□□□□ 0.61
SYDE1-204ENST00000600440 ZSCAN26Q16670 478 aa18.88■□□□□ 0.61
SYDE1-204ENST00000600440 PTPN21Q16825 1174 aa18.88■□□□□ 0.61
SYDE1-204ENST00000600440 IFT172Q9UG01 1749 aa18.88■□□□□ 0.61
SYDE1-204ENST00000600440 ADGRB3O60242 1522 aa18.88■□□□□ 0.61
SYDE1-204ENST00000600440 NEMFO60524 1076 aa18.88■□□□□ 0.61
SYDE1-204ENST00000600440 IQCB1Q15051 598 aa18.88■□□□□ 0.61
SYDE1-204ENST00000600440 SLFNL1Q499Z3 407 aa18.88■□□□□ 0.61
SYDE1-204ENST00000600440 PPP1R13BQ96KQ4 1090 aa18.88■□□□□ 0.61
SYDE1-204ENST00000600440 RPGRIP1LQ68CZ1 1315 aa18.88■□□□□ 0.61
SYDE1-204ENST00000600440 PDCP20941 246 aa18.87■□□□□ 0.61
SYDE1-204ENST00000600440 EFCAB6Q5THR3 1501 aa18.87■□□□□ 0.61
SYDE1-204ENST00000600440 HSP90B1P14625 803 aaKnown RBP18.87■□□□□ 0.61
SYDE1-204ENST00000600440 E4F1Q66K89 784 aaPredicted RBP18.87■□□□□ 0.61
SYDE1-204ENST00000600440 NUTM2FA1L443 756 aa18.87■□□□□ 0.61
SYDE1-204ENST00000600440 CARD6Q9BX69 1037 aa18.87■□□□□ 0.61
SYDE1-204ENST00000600440 RBM8AQ9Y5S9 174 aaKnown RBP18.87■□□□□ 0.61
SYDE1-204ENST00000600440 ZCCHC11Q5TAX3 1644 aaKnown RBP18.87■□□□□ 0.61
SYDE1-204ENST00000600440 MYO1CO00159 1063 aa18.86■□□□□ 0.61
SYDE1-204ENST00000600440 STX1AQ16623 288 aa18.86■□□□□ 0.61
SYDE1-204ENST00000600440 RNF20Q5VTR2 975 aa18.86■□□□□ 0.61
SYDE1-204ENST00000600440 TXLNBQ8N3L3 684 aa18.86■□□□□ 0.61
SYDE1-204ENST00000600440 MRFAP1L1Q96HT8 127 aa18.86■□□□□ 0.61
SYDE1-204ENST00000600440 SOS1Q07889 1333 aaPredicted RBP18.86■□□□□ 0.61
SYDE1-204ENST00000600440 BIN1O00499 593 aa18.86■□□□□ 0.61
SYDE1-204ENST00000600440 GPS2Q13227 327 aa18.86■□□□□ 0.61
SYDE1-204ENST00000600440 ZRSR1Q15695 479 aaKnown RBP18.86■□□□□ 0.61
SYDE1-204ENST00000600440 SKIDA1Q1XH10 827 aa18.86■□□□□ 0.61
SYDE1-204ENST00000600440 CCAR1Q8IX12 1150 aaKnown RBP18.86■□□□□ 0.61
SYDE1-204ENST00000600440 TAF6LQ9Y6J9 622 aa18.85■□□□□ 0.61
SYDE1-204ENST00000600440 ELP1O95163 1332 aa18.85■□□□□ 0.61
SYDE1-204ENST00000600440 TTC21AQ8NDW8 1320 aa18.85■□□□□ 0.61
SYDE1-204ENST00000600440 MAP2P11137 1827 aaKnown RBP18.85■□□□□ 0.61
SYDE1-204ENST00000600440 SFPQP23246 707 aaKnown RBP eCLIP18.85■□□□□ 0.61
SYDE1-204ENST00000600440 ISM2Q6H9L7 571 aa18.85■□□□□ 0.61
SYDE1-204ENST00000600440 EIF4A2Q14240 407 aaKnown RBP18.85■□□□□ 0.61
SYDE1-204ENST00000600440 NFATC2IPQ8NCF5 419 aa18.85■□□□□ 0.61
SYDE1-204ENST00000600440 RUFY2Q8WXA3 655 aa18.85■□□□□ 0.61
SYDE1-204ENST00000600440 BRF1Q92994 677 aa18.85■□□□□ 0.61
SYDE1-204ENST00000600440 FAM227BQ96M60 508 aa18.85■□□□□ 0.61
SYDE1-204ENST00000600440 ZSWIM4Q9H7M6 989 aa18.85■□□□□ 0.61
SYDE1-204ENST00000600440 ZSWIM6Q9HCJ5 1215 aa18.85■□□□□ 0.61
SYDE1-204ENST00000600440 DEPDC5O75140 1603 aa18.84■□□□□ 0.61
SYDE1-204ENST00000600440 ANKRD65E5RJM6 399 aa18.84■□□□□ 0.61
SYDE1-204ENST00000600440 KINO60870 393 aaKnown RBP18.84■□□□□ 0.61
SYDE1-204ENST00000600440 BLOC1S2Q6QNY1 142 aa18.84■□□□□ 0.61
SYDE1-204ENST00000600440 CCDC73Q6ZRK6 1079 aa18.84■□□□□ 0.61
SYDE1-204ENST00000600440 IFNKQ9P0W0 207 aa18.84■□□□□ 0.61
SYDE1-204ENST00000600440 DLG5Q8TDM6 1919 aa18.84■□□□□ 0.61
SYDE1-204ENST00000600440 ARHGEF28Q8N1W1 1705 aaKnown RBP18.84■□□□□ 0.61
SYDE1-204ENST00000600440 CDC25BP30305 580 aa18.84■□□□□ 0.61
SYDE1-204ENST00000600440 GUCY1B3Q02153 619 aa18.84■□□□□ 0.61
SYDE1-204ENST00000600440 GOLGA8FQ08AF8 430 aa18.84■□□□□ 0.61
SYDE1-204ENST00000600440 GOLGA8DPQ0D2H9 430 aa18.84■□□□□ 0.61
SYDE1-204ENST00000600440 CREB3L3Q68CJ9 461 aa18.84■□□□□ 0.61
SYDE1-204ENST00000600440 USP44Q9H0E7 712 aa18.84■□□□□ 0.61
SYDE1-204ENST00000600440 SDF4Q9BRK5 362 aa18.83■□□□□ 0.61
SYDE1-204ENST00000600440 LRRC2Q9BYS8 371 aa18.83■□□□□ 0.61
SYDE1-204ENST00000600440 SIL1Q9H173 461 aa18.83■□□□□ 0.61
SYDE1-204ENST00000600440 GTF2A1P52655 376 aaPredicted RBP18.83■□□□□ 0.6
SYDE1-204ENST00000600440 FANCAO15360 1455 aa18.83■□□□□ 0.6
SYDE1-204ENST00000600440 KIF2AO00139 706 aaPredicted RBP18.82■□□□□ 0.6
SYDE1-204ENST00000600440 SMC1AQ14683 1233 aaKnown RBP18.82■□□□□ 0.6
SYDE1-204ENST00000600440 CEP57L1Q8IYX8 460 aa18.82■□□□□ 0.6
SYDE1-204ENST00000600440 ORC3Q9UBD5 711 aaPredicted RBP18.82■□□□□ 0.6
SYDE1-204ENST00000600440 HSP90AB2PQ58FF8 381 aa18.82■□□□□ 0.6
SYDE1-204ENST00000600440 XPO4Q9C0E2 1151 aaKnown RBP18.82■□□□□ 0.6
SYDE1-204ENST00000600440 SASH3O75995 380 aa18.82■□□□□ 0.6
SYDE1-204ENST00000600440 EIF2S2P20042 333 aaKnown RBP18.82■□□□□ 0.6
SYDE1-204ENST00000600440 ME1P48163 572 aa18.82■□□□□ 0.6
SYDE1-204ENST00000600440 EVCP57679 992 aa18.82■□□□□ 0.6
SYDE1-204ENST00000600440 DHX40Q8IX18 779 aaKnown RBP18.82■□□□□ 0.6
SYDE1-204ENST00000600440 NRDCO43847 1150 aa18.81■□□□□ 0.6
SYDE1-204ENST00000600440 CPSF1Q10570 1443 aaKnown RBP18.81■□□□□ 0.6
SYDE1-204ENST00000600440 ARMCX5Q6P1M9 558 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms