RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-221ENST00000598808 PXDNLA1KZ92 1463 aa25.56■■□□□ 1.68
IRF3-221ENST00000598808 NTSR2O95665 410 aa25.56■■□□□ 1.68
IRF3-221ENST00000598808 CHRNA5P30532 468 aa25.56■■□□□ 1.68
IRF3-221ENST00000598808 SLC4A10Q6U841 1118 aa25.56■■□□□ 1.68
IRF3-221ENST00000598808 ISCA1Q9BUE6 129 aa25.56■■□□□ 1.68
IRF3-221ENST00000598808 ABCC12Q96J65 1359 aa25.55■■□□□ 1.68
IRF3-221ENST00000598808 IBTKQ9P2D0 1353 aaPredicted RBP25.55■■□□□ 1.68
IRF3-221ENST00000598808 DCAF8L1A6NGE4 600 aa25.55■■□□□ 1.68
IRF3-221ENST00000598808 DPEP1P16444 411 aa25.55■■□□□ 1.68
IRF3-221ENST00000598808 RTL5Q5HYW3 569 aaPredicted RBP25.55■■□□□ 1.68
IRF3-221ENST00000598808 C2CD5Q86YS7 1000 aa25.55■■□□□ 1.68
IRF3-221ENST00000598808 PDE6BP35913 854 aa25.54■■□□□ 1.68
IRF3-221ENST00000598808 TGFB2P61812 414 aa25.54■■□□□ 1.68
IRF3-221ENST00000598808 BRIP1Q9BX63 1249 aa25.54■■□□□ 1.68
IRF3-221ENST00000598808 CWC25Q9NXE8 425 aaPredicted RBP25.54■■□□□ 1.68
IRF3-221ENST00000598808 ANKRD31Q8N7Z5 1873 aa25.54■■□□□ 1.68
IRF3-221ENST00000598808 PTPRCP08575 1304 aa25.54■■□□□ 1.68
IRF3-221ENST00000598808 H0YIN7 160 aa25.53■■□□□ 1.68
IRF3-221ENST00000598808 CWF19L2Q2TBE0 894 aaKnown RBP25.53■■□□□ 1.68
IRF3-221ENST00000598808 SH3TC1Q8TE82 1336 aa25.52■■□□□ 1.68
IRF3-221ENST00000598808 CCDC191Q8NCU4 936 aa25.52■■□□□ 1.68
IRF3-221ENST00000598808 FRAT1Q92837 279 aaPredicted RBP25.52■■□□□ 1.68
IRF3-221ENST00000598808 NOB1Q9ULX3 412 aaKnown RBP25.52■■□□□ 1.68
IRF3-221ENST00000598808 KIAA1551Q9HCM1 1747 aa25.51■■□□□ 1.67
IRF3-221ENST00000598808 KIF16BQ96L93 1317 aa25.51■■□□□ 1.67
IRF3-221ENST00000598808 GPR162Q16538 588 aa25.51■■□□□ 1.67
IRF3-221ENST00000598808 ZNF622Q969S3 477 aaKnown RBP eCLIP25.51■■□□□ 1.67
IRF3-221ENST00000598808 FAM89AQ96GI7 184 aa25.51■■□□□ 1.67
IRF3-221ENST00000598808 TNRC6CQ9HCJ0 1690 aaKnown RBP25.5■■□□□ 1.67
IRF3-221ENST00000598808 BCAR3O75815 825 aa25.5■■□□□ 1.67
IRF3-221ENST00000598808 IGKV5-2P06315 115 aa25.5■■□□□ 1.67
IRF3-221ENST00000598808 RNF123Q5XPI4 1314 aa25.49■■□□□ 1.67
IRF3-221ENST00000598808 COL11A2P13942 1736 aaPredicted RBP25.49■■□□□ 1.67
IRF3-221ENST00000598808 NEURL1BA8MQ27 555 aa25.49■■□□□ 1.67
IRF3-221ENST00000598808 NEFLP07196 543 aa25.49■■□□□ 1.67
IRF3-221ENST00000598808 HCLS1P14317 486 aaPredicted RBP25.49■■□□□ 1.67
IRF3-221ENST00000598808 SYNE4Q8N205 404 aa25.49■■□□□ 1.67
IRF3-221ENST00000598808 JARID2Q92833 1246 aaPredicted RBP25.49■■□□□ 1.67
IRF3-221ENST00000598808 TRIM28Q13263 835 aaKnown RBP25.48■■□□□ 1.67
IRF3-221ENST00000598808 BCS1LQ9Y276 419 aa25.48■■□□□ 1.67
IRF3-221ENST00000598808 LINS1Q8NG48 757 aa25.47■■□□□ 1.67
IRF3-221ENST00000598808 PIM2Q9P1W9 311 aa25.47■■□□□ 1.67
IRF3-221ENST00000598808 YBX3P16989 372 aaKnown RBP eCLIP25.47■■□□□ 1.67
IRF3-221ENST00000598808 RPGRQ92834 1020 aaKnown RBP25.47■■□□□ 1.67
IRF3-221ENST00000598808 PDZRN3Q9UPQ7 1066 aa25.47■■□□□ 1.67
IRF3-221ENST00000598808 ZBTB38Q8NAP3 1195 aaPredicted RBP25.46■■□□□ 1.67
IRF3-221ENST00000598808 NLRP3Q96P20 1036 aa25.46■■□□□ 1.67
IRF3-221ENST00000598808 API5Q9BZZ5 524 aaKnown RBP25.46■■□□□ 1.67
IRF3-221ENST00000598808 SRCIN1Q9C0H9 1055 aa25.46■■□□□ 1.67
IRF3-221ENST00000598808 IRS4O14654 1257 aaPredicted RBP25.45■■□□□ 1.66
IRF3-221ENST00000598808 BEND3Q5T5X7 828 aa25.45■■□□□ 1.66
IRF3-221ENST00000598808 DLEC1Q9Y238 1755 aa25.45■■□□□ 1.66
IRF3-221ENST00000598808 CHD4Q14839 1912 aa25.44■■□□□ 1.66
IRF3-221ENST00000598808 IPO8O15397 1037 aaKnown RBP25.44■■□□□ 1.66
IRF3-221ENST00000598808 PCCAP05165 728 aaPredicted RBP25.44■■□□□ 1.66
IRF3-221ENST00000598808 GCKRQ14397 625 aa25.44■■□□□ 1.66
IRF3-221ENST00000598808 DALRD3Q5D0E6 543 aaKnown RBP25.44■■□□□ 1.66
IRF3-221ENST00000598808 UBE3BQ7Z3V4 1068 aa25.44■■□□□ 1.66
IRF3-221ENST00000598808 KCNA3P22001 575 aa25.43■■□□□ 1.66
IRF3-221ENST00000598808 YY1P25490 414 aa25.43■■□□□ 1.66
IRF3-221ENST00000598808 MASTLQ96GX5 879 aa25.43■■□□□ 1.66
IRF3-221ENST00000598808 CACNA1SQ13698 1873 aa25.43■■□□□ 1.66
IRF3-221ENST00000598808 SRGNP10124 158 aa25.42■■□□□ 1.66
IRF3-221ENST00000598808 NPR1P16066 1061 aa25.42■■□□□ 1.66
IRF3-221ENST00000598808 BRPF1P55201 1214 aaPredicted RBP25.42■■□□□ 1.66
IRF3-221ENST00000598808 RIC1Q4ADV7 1423 aa25.42■■□□□ 1.66
IRF3-221ENST00000598808 C3orf67Q6ZVT6 689 aa25.42■■□□□ 1.66
IRF3-221ENST00000598808 DDX60Q8IY21 1712 aaKnown RBP25.42■■□□□ 1.66
IRF3-221ENST00000598808 HSP90B1P14625 803 aaKnown RBP25.41■■□□□ 1.66
IRF3-221ENST00000598808 TTLL6Q8N841 843 aa25.41■■□□□ 1.66
IRF3-221ENST00000598808 C9orf78Q9NZ63 289 aaPredicted RBP25.41■■□□□ 1.66
IRF3-221ENST00000598808 ZNF219Q9P2Y4 722 aaPredicted RBP25.41■■□□□ 1.66
IRF3-221ENST00000598808 RCAN3Q9UKA8 241 aa25.41■■□□□ 1.66
IRF3-221ENST00000598808 BRCA1P38398 1863 aaKnown RBP25.41■■□□□ 1.66
IRF3-221ENST00000598808 LAMB2P55268 1798 aa25.41■■□□□ 1.66
IRF3-221ENST00000598808 SLC10A5Q5PT55 438 aa25.4■■□□□ 1.66
IRF3-221ENST00000598808 STYK1Q6J9G0 422 aa25.4■■□□□ 1.66
IRF3-221ENST00000598808 ZKSCAN2Q63HK3 967 aa25.4■■□□□ 1.66
IRF3-221ENST00000598808 CNKSR1Q969H4 720 aa25.4■■□□□ 1.66
IRF3-221ENST00000598808 CLUAP1Q96AJ1 413 aa25.4■■□□□ 1.66
IRF3-221ENST00000598808 ALDH1L1O75891 902 aa25.39■■□□□ 1.65
IRF3-221ENST00000598808 RBM17Q96I25 401 aaKnown RBP25.39■■□□□ 1.65
IRF3-221ENST00000598808 ATF7IPQ6VMQ6 1270 aa25.38■■□□□ 1.65
IRF3-221ENST00000598808 CCDC85AQ96PX6 553 aaPredicted RBP25.38■■□□□ 1.65
IRF3-221ENST00000598808 CCT4P50991 539 aaKnown RBP25.37■■□□□ 1.65
IRF3-221ENST00000598808 CRY2Q49AN0 593 aa25.37■■□□□ 1.65
IRF3-221ENST00000598808 ERICH6BQ5W0A0 696 aa25.37■■□□□ 1.65
IRF3-221ENST00000598808 FTSJ3Q8IY81 847 aaKnown RBP25.37■■□□□ 1.65
IRF3-221ENST00000598808 ARHGAP45Q92619 1136 aa25.37■■□□□ 1.65
IRF3-221ENST00000598808 CDHR2Q9BYE9 1310 aa25.37■■□□□ 1.65
IRF3-221ENST00000598808 KLRG2A4D1S0 409 aaPredicted RBP25.36■■□□□ 1.65
IRF3-221ENST00000598808 GRM8O00222 908 aa25.36■■□□□ 1.65
IRF3-221ENST00000598808 PDE8AO60658 829 aa25.36■■□□□ 1.65
IRF3-221ENST00000598808 TRIM27P14373 513 aa25.36■■□□□ 1.65
IRF3-221ENST00000598808 PRPF40BQ6NWY9 871 aaKnown RBP25.36■■□□□ 1.65
IRF3-221ENST00000598808 TNNQ9UQP3 1299 aa25.36■■□□□ 1.65
IRF3-221ENST00000598808 H7C1W4 665 aa25.35■■□□□ 1.65
IRF3-221ENST00000598808 DDX46Q7L014 1031 aaKnown RBP25.35■■□□□ 1.65
IRF3-221ENST00000598808 GRIN3BO60391 1043 aa25.34■■□□□ 1.65
IRF3-221ENST00000598808 ALDH1B1P30837 517 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms