RNA–Protein interactions for RNA: ENST00000597353.5

SNRPA-203, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 5

Gene SNRPA, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-203ENST00000597353 ANKRD36CQ5JPF3 1778 aa27.86■■■□□ 2.05
SNRPA-203ENST00000597353 C21orf2O43822 256 aa27.86■■■□□ 2.05
SNRPA-203ENST00000597353 PPP1R42Q7Z4L9 355 aa27.86■■■□□ 2.05
SNRPA-203ENST00000597353 SYNE4Q8N205 404 aa27.86■■■□□ 2.05
SNRPA-203ENST00000597353 UTP14AQ9BVJ6 771 aaKnown RBP27.86■■■□□ 2.05
SNRPA-203ENST00000597353 SLX4Q8IY92 1834 aa27.85■■■□□ 2.05
SNRPA-203ENST00000597353 TCERG1O14776 1098 aaKnown RBP27.85■■■□□ 2.05
SNRPA-203ENST00000597353 SLC10A5Q5PT55 438 aa27.85■■■□□ 2.05
SNRPA-203ENST00000597353 C9orf131Q5VYM1 1079 aa27.85■■■□□ 2.05
SNRPA-203ENST00000597353 EXOSC9Q06265 439 aaKnown RBP27.84■■■□□ 2.05
SNRPA-203ENST00000597353 ZNF428Q96B54 188 aa27.83■■■□□ 2.05
SNRPA-203ENST00000597353 ZNF219Q9P2Y4 722 aaPredicted RBP27.83■■■□□ 2.05
SNRPA-203ENST00000597353 RNF123Q5XPI4 1314 aa27.83■■■□□ 2.05
SNRPA-203ENST00000597353 ARFGEF2Q9Y6D5 1785 aa27.82■■■□□ 2.04
SNRPA-203ENST00000597353 ATP5J2-PTCD1G3V325 749 aa27.82■■■□□ 2.04
SNRPA-203ENST00000597353 VAMP4O75379 141 aa27.82■■■□□ 2.04
SNRPA-203ENST00000597353 HOXA10P31260 410 aaPredicted RBP27.81■■■□□ 2.04
SNRPA-203ENST00000597353 GOLGA2Q08379 1002 aa27.81■■■□□ 2.04
SNRPA-203ENST00000597353 TRIM28Q13263 835 aaKnown RBP27.81■■■□□ 2.04
SNRPA-203ENST00000597353 G2E3Q7L622 706 aa27.81■■■□□ 2.04
SNRPA-203ENST00000597353 CHMP4AQ9BY43 222 aa27.81■■■□□ 2.04
SNRPA-203ENST00000597353 OLFM4Q6UX06 510 aa27.8■■■□□ 2.04
SNRPA-203ENST00000597353 SNED1Q8TER0 1413 aa27.79■■■□□ 2.04
SNRPA-203ENST00000597353 DIEXFQ68CQ4 756 aaKnown RBP27.79■■■□□ 2.04
SNRPA-203ENST00000597353 RNF181Q9P0P0 153 aa27.79■■■□□ 2.04
SNRPA-203ENST00000597353 TRMT112Q9UI30 125 aaKnown RBP27.79■■■□□ 2.04
SNRPA-203ENST00000597353 HCLS1P14317 486 aaPredicted RBP27.78■■■□□ 2.04
SNRPA-203ENST00000597353 RIC3Q7Z5B4 369 aa27.78■■■□□ 2.04
SNRPA-203ENST00000597353 SLC51AQ86UW1 340 aa27.78■■■□□ 2.04
SNRPA-203ENST00000597353 MYH16Q9H6N6 1097 aa27.78■■■□□ 2.04
SNRPA-203ENST00000597353 SH3TC1Q8TE82 1336 aa27.77■■■□□ 2.04
SNRPA-203ENST00000597353 LMNB1P20700 586 aa27.77■■■□□ 2.04
SNRPA-203ENST00000597353 MIER1Q8N108 512 aa27.77■■■□□ 2.04
SNRPA-203ENST00000597353 SBF1O95248 1867 aa27.76■■■□□ 2.04
SNRPA-203ENST00000597353 LTBP3Q9NS15 1303 aa27.76■■■□□ 2.03
SNRPA-203ENST00000597353 ZNF526Q8TF50 670 aaPredicted RBP27.76■■■□□ 2.03
SNRPA-203ENST00000597353 STK31Q9BXU1 1019 aa27.76■■■□□ 2.03
SNRPA-203ENST00000597353 FER1L6Q2WGJ9 1857 aa27.75■■■□□ 2.03
SNRPA-203ENST00000597353 SLC4A2P04920 1241 aa27.75■■■□□ 2.03
SNRPA-203ENST00000597353 ALDH1B1P30837 517 aa27.75■■■□□ 2.03
SNRPA-203ENST00000597353 FAM89AQ96GI7 184 aa27.75■■■□□ 2.03
SNRPA-203ENST00000597353 NLRP3Q96P20 1036 aa27.75■■■□□ 2.03
SNRPA-203ENST00000597353 MYD88Q99836 296 aa27.75■■■□□ 2.03
SNRPA-203ENST00000597353 METTL22Q9BUU2 404 aaPredicted RBP27.75■■■□□ 2.03
SNRPA-203ENST00000597353 CACNA1SQ13698 1873 aa27.74■■■□□ 2.03
SNRPA-203ENST00000597353 RPGRQ92834 1020 aaKnown RBP27.74■■■□□ 2.03
SNRPA-203ENST00000597353 CRAMP1Q96RY5 1269 aa27.74■■■□□ 2.03
SNRPA-203ENST00000597353 MAP3K2Q9Y2U5 619 aa27.74■■■□□ 2.03
SNRPA-203ENST00000597353 PI4KAP2A4QPH2 592 aa27.73■■■□□ 2.03
SNRPA-203ENST00000597353 SOGA3Q5TF21 947 aa27.73■■■□□ 2.03
SNRPA-203ENST00000597353 KSR2Q6VAB6 950 aa27.73■■■□□ 2.03
SNRPA-203ENST00000597353 PI4KAP1Q8N8J0 262 aa27.73■■■□□ 2.03
SNRPA-203ENST00000597353 DDX58O95786 925 aaKnown RBP27.72■■■□□ 2.03
SNRPA-203ENST00000597353 IGKV5-2P06315 115 aa27.72■■■□□ 2.03
SNRPA-203ENST00000597353 CCDC93Q567U6 631 aa27.72■■■□□ 2.03
SNRPA-203ENST00000597353 TAOK3Q9H2K8 898 aa27.72■■■□□ 2.03
SNRPA-203ENST00000597353 GPBP1L1Q9HC44 474 aaPredicted RBP27.72■■■□□ 2.03
SNRPA-203ENST00000597353 FLIIQ13045 1269 aa27.71■■■□□ 2.03
SNRPA-203ENST00000597353 RBM17Q96I25 401 aaKnown RBP27.71■■■□□ 2.03
SNRPA-203ENST00000597353 ABCC4O15439 1325 aa27.7■■■□□ 2.03
SNRPA-203ENST00000597353 CCDC191Q8NCU4 936 aa27.7■■■□□ 2.02
SNRPA-203ENST00000597353 DDX60Q8IY21 1712 aaKnown RBP27.7■■■□□ 2.02
SNRPA-203ENST00000597353 LAMB2P55268 1798 aa27.69■■■□□ 2.02
SNRPA-203ENST00000597353 SLFN5Q08AF3 891 aa27.69■■■□□ 2.02
SNRPA-203ENST00000597353 RTL5Q5HYW3 569 aaPredicted RBP27.69■■■□□ 2.02
SNRPA-203ENST00000597353 ZBTB38Q8NAP3 1195 aaPredicted RBP27.69■■■□□ 2.02
SNRPA-203ENST00000597353 ZC3H4Q9UPT8 1303 aaKnown RBP27.68■■■□□ 2.02
SNRPA-203ENST00000597353 E9PSI1 815 aa27.68■■■□□ 2.02
SNRPA-203ENST00000597353 CDCA7LQ96GN5 454 aa27.68■■■□□ 2.02
SNRPA-203ENST00000597353 KIF3CO14782 793 aa27.67■■■□□ 2.02
SNRPA-203ENST00000597353 FKBP4Q02790 459 aaKnown RBP eCLIP27.67■■■□□ 2.02
SNRPA-203ENST00000597353 CWC25Q9NXE8 425 aaPredicted RBP27.67■■■□□ 2.02
SNRPA-203ENST00000597353 IRS4O14654 1257 aaPredicted RBP27.66■■■□□ 2.02
SNRPA-203ENST00000597353 PPEF1O14829 653 aaPredicted RBP27.66■■■□□ 2.02
SNRPA-203ENST00000597353 SF3B3Q15393 1217 aaKnown RBP27.66■■■□□ 2.02
SNRPA-203ENST00000597353 TRMT2AQ8IZ69 625 aaKnown RBP27.66■■■□□ 2.02
SNRPA-203ENST00000597353 COL4A1P02462 1669 aa27.65■■■□□ 2.02
SNRPA-203ENST00000597353 PCCAP05165 728 aaPredicted RBP27.65■■■□□ 2.02
SNRPA-203ENST00000597353 RTKN2Q8IZC4 609 aa27.65■■■□□ 2.02
SNRPA-203ENST00000597353 JARID2Q92833 1246 aaPredicted RBP27.65■■■□□ 2.02
SNRPA-203ENST00000597353 NMRK2Q9NPI5 230 aa27.65■■■□□ 2.02
SNRPA-203ENST00000597353 CWF19L2Q2TBE0 894 aaKnown RBP27.64■■■□□ 2.02
SNRPA-203ENST00000597353 ZNF277Q9NRM2 450 aaPredicted RBP27.64■■■□□ 2.02
SNRPA-203ENST00000597353 NEURL1BA8MQ27 555 aa27.63■■■□□ 2.01
SNRPA-203ENST00000597353 FKBP5Q13451 457 aaPredicted RBP27.63■■■□□ 2.01
SNRPA-203ENST00000597353 TIAM2Q8IVF5 1701 aa27.63■■■□□ 2.01
SNRPA-203ENST00000597353 GRAPQ13588 217 aa27.62■■■□□ 2.01
SNRPA-203ENST00000597353 CC2D2BQ6DHV5 1058 aa27.62■■■□□ 2.01
SNRPA-203ENST00000597353 GRAPLQ8TC17 118 aaPredicted RBP27.62■■■□□ 2.01
SNRPA-203ENST00000597353 PSMD1Q99460 953 aa27.62■■■□□ 2.01
SNRPA-203ENST00000597353 ATP6V0A2Q9Y487 856 aa27.62■■■□□ 2.01
SNRPA-203ENST00000597353 C1QTNF8P60827 252 aa27.61■■■□□ 2.01
SNRPA-203ENST00000597353 DDX46Q7L014 1031 aaKnown RBP27.61■■■□□ 2.01
SNRPA-203ENST00000597353 DNAAF4Q8WXU2 420 aa27.61■■■□□ 2.01
SNRPA-203ENST00000597353 BBOX1O75936 387 aa27.6■■■□□ 2.01
SNRPA-203ENST00000597353 CCDC88AQ3V6T2 1871 aa27.59■■■□□ 2.01
SNRPA-203ENST00000597353 COL4A5P29400 1685 aa27.59■■■□□ 2.01
SNRPA-203ENST00000597353 GLTPD2A6NH11 291 aa27.59■■■□□ 2.01
SNRPA-203ENST00000597353 F6X3S4 739 aa27.59■■■□□ 2.01
SNRPA-203ENST00000597353 CELF1Q92879 486 aaKnown RBP27.59■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms