RNA–Protein interactions for RNA: ENST00000596957.1

ARHGEF1-214, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-214ENST00000596957 KLHL34Q8N239 644 aa18.91■□□□□ 0.62
ARHGEF1-214ENST00000596957 TNNQ9UQP3 1299 aa18.91■□□□□ 0.62
ARHGEF1-214ENST00000596957 ALDH1L1O75891 902 aa18.9■□□□□ 0.62
ARHGEF1-214ENST00000596957 IGKV5-2P06315 115 aa18.9■□□□□ 0.62
ARHGEF1-214ENST00000596957 RRP1P56182 461 aaKnown RBP18.9■□□□□ 0.62
ARHGEF1-214ENST00000596957 TRIM28Q13263 835 aaKnown RBP18.9■□□□□ 0.62
ARHGEF1-214ENST00000596957 RTL5Q5HYW3 569 aaPredicted RBP18.9■□□□□ 0.62
ARHGEF1-214ENST00000596957 C9orf78Q9NZ63 289 aaPredicted RBP18.89■□□□□ 0.61
ARHGEF1-214ENST00000596957 ABCC4O15439 1325 aa18.89■□□□□ 0.61
ARHGEF1-214ENST00000596957 PXDNLA1KZ92 1463 aa18.89■□□□□ 0.61
ARHGEF1-214ENST00000596957 ARFGEF2Q9Y6D5 1785 aa18.88■□□□□ 0.61
ARHGEF1-214ENST00000596957 PTGER2P43116 358 aa18.88■□□□□ 0.61
ARHGEF1-214ENST00000596957 GCKRQ14397 625 aa18.88■□□□□ 0.61
ARHGEF1-214ENST00000596957 NUTM1Q86Y26 1132 aa18.88■□□□□ 0.61
ARHGEF1-214ENST00000596957 ITPRIPQ8IWB1 547 aa18.88■□□□□ 0.61
ARHGEF1-214ENST00000596957 CCDC24Q8N4L8 307 aa18.88■□□□□ 0.61
ARHGEF1-214ENST00000596957 SUPT16HQ9Y5B9 1047 aaKnown RBP18.88■□□□□ 0.61
ARHGEF1-214ENST00000596957 SH3TC1Q8TE82 1336 aa18.88■□□□□ 0.61
ARHGEF1-214ENST00000596957 NTSR2O95665 410 aa18.87■□□□□ 0.61
ARHGEF1-214ENST00000596957 PRR5LQ6MZQ0 368 aa18.87■□□□□ 0.61
ARHGEF1-214ENST00000596957 TMEM57Q8N5G2 664 aa18.87■□□□□ 0.61
ARHGEF1-214ENST00000596957 PANK1Q8TE04 598 aa18.87■□□□□ 0.61
ARHGEF1-214ENST00000596957 FAM89AQ96GI7 184 aa18.87■□□□□ 0.61
ARHGEF1-214ENST00000596957 CACNA1FO60840 1977 aa18.86■□□□□ 0.61
ARHGEF1-214ENST00000596957 IBTKQ9P2D0 1353 aaPredicted RBP18.86■□□□□ 0.61
ARHGEF1-214ENST00000596957 RNF123Q5XPI4 1314 aa18.86■□□□□ 0.61
ARHGEF1-214ENST00000596957 ERFEQ4G0M1 354 aa18.86■□□□□ 0.61
ARHGEF1-214ENST00000596957 INTS3Q68E01 1043 aaKnown RBP18.86■□□□□ 0.61
ARHGEF1-214ENST00000596957 ZBTB38Q8NAP3 1195 aaPredicted RBP18.86■□□□□ 0.61
ARHGEF1-214ENST00000596957 JARID2Q92833 1246 aaPredicted RBP18.86■□□□□ 0.61
ARHGEF1-214ENST00000596957 PCCAP05165 728 aaPredicted RBP18.85■□□□□ 0.61
ARHGEF1-214ENST00000596957 HSP90B1P14625 803 aaKnown RBP18.85■□□□□ 0.61
ARHGEF1-214ENST00000596957 UBE3BQ7Z3V4 1068 aa18.85■□□□□ 0.61
ARHGEF1-214ENST00000596957 SGIP1Q9BQI5 828 aa18.85■□□□□ 0.61
ARHGEF1-214ENST00000596957 GRM8O00222 908 aa18.84■□□□□ 0.61
ARHGEF1-214ENST00000596957 RLBP1P12271 317 aa18.84■□□□□ 0.61
ARHGEF1-214ENST00000596957 PDE3AQ14432 1141 aa18.84■□□□□ 0.61
ARHGEF1-214ENST00000596957 NUP98P52948 1817 aa18.84■□□□□ 0.61
ARHGEF1-214ENST00000596957 IRS4O14654 1257 aaPredicted RBP18.83■□□□□ 0.6
ARHGEF1-214ENST00000596957 HCLS1P14317 486 aaPredicted RBP18.83■□□□□ 0.6
ARHGEF1-214ENST00000596957 COG6Q9Y2V7 657 aa18.83■□□□□ 0.6
ARHGEF1-214ENST00000596957 UBTFL1P0CB47 393 aaPredicted RBP18.82■□□□□ 0.6
ARHGEF1-214ENST00000596957 C20orf194Q5TEA3 1177 aa18.82■□□□□ 0.6
ARHGEF1-214ENST00000596957 SYNE4Q8N205 404 aa18.82■□□□□ 0.6
ARHGEF1-214ENST00000596957 H7C1W4 665 aa18.81■□□□□ 0.6
ARHGEF1-214ENST00000596957 PDE6BP35913 854 aa18.81■□□□□ 0.6
ARHGEF1-214ENST00000596957 NLRP3Q96P20 1036 aa18.81■□□□□ 0.6
ARHGEF1-214ENST00000596957 BRIP1Q9BX63 1249 aa18.81■□□□□ 0.6
ARHGEF1-214ENST00000596957 ANKRD36CQ5JPF3 1778 aa18.81■□□□□ 0.6
ARHGEF1-214ENST00000596957 ABCC12Q96J65 1359 aa18.81■□□□□ 0.6
ARHGEF1-214ENST00000596957 GNAI3P08754 354 aa18.8■□□□□ 0.6
ARHGEF1-214ENST00000596957 MVPQ14764 893 aaKnown RBP18.8■□□□□ 0.6
ARHGEF1-214ENST00000596957 HDAC5Q9UQL6 1122 aa18.8■□□□□ 0.6
ARHGEF1-214ENST00000596957 CDHR2Q9BYE9 1310 aa18.79■□□□□ 0.6
ARHGEF1-214ENST00000596957 NBPF7P0C2Y1 421 aaPredicted RBP18.79■□□□□ 0.6
ARHGEF1-214ENST00000596957 MEIS3Q99687 375 aa18.79■□□□□ 0.6
ARHGEF1-214ENST00000596957 USP44Q9H0E7 712 aa18.79■□□□□ 0.6
ARHGEF1-214ENST00000596957 CHMP4BQ9H444 224 aaKnown RBP18.79■□□□□ 0.6
ARHGEF1-214ENST00000596957 DDX19BQ9UMR2 479 aa18.79■□□□□ 0.6
ARHGEF1-214ENST00000596957 CD2APQ9Y5K6 639 aa18.79■□□□□ 0.6
ARHGEF1-214ENST00000596957 C10orf71Q711Q0 1435 aa18.79■□□□□ 0.6
ARHGEF1-214ENST00000596957 COL24A1Q17RW2 1714 aa18.79■□□□□ 0.6
ARHGEF1-214ENST00000596957 PDE8AO60658 829 aa18.78■□□□□ 0.6
ARHGEF1-214ENST00000596957 SLC10A5Q5PT55 438 aa18.78■□□□□ 0.6
ARHGEF1-214ENST00000596957 C2CD5Q86YS7 1000 aa18.78■□□□□ 0.6
ARHGEF1-214ENST00000596957 RPGRQ92834 1020 aaKnown RBP18.78■□□□□ 0.6
ARHGEF1-214ENST00000596957 H0YIN7 160 aa18.77■□□□□ 0.6
ARHGEF1-214ENST00000596957 FHDC1Q9C0D6 1143 aaPredicted RBP18.77■□□□□ 0.6
ARHGEF1-214ENST00000596957 UTYO14607 1347 aa18.76■□□□□ 0.59
ARHGEF1-214ENST00000596957 CASP7P55210 303 aa18.76■□□□□ 0.59
ARHGEF1-214ENST00000596957 SUCLG2Q96I99 432 aa18.76■□□□□ 0.59
ARHGEF1-214ENST00000596957 CCDC85AQ96PX6 553 aaPredicted RBP18.76■□□□□ 0.59
ARHGEF1-214ENST00000596957 PDZRN3Q9UPQ7 1066 aa18.76■□□□□ 0.59
ARHGEF1-214ENST00000596957 CHMP3Q9Y3E7 222 aa18.76■□□□□ 0.59
ARHGEF1-214ENST00000596957 AFDNP55196 1824 aaKnown RBP18.76■□□□□ 0.59
ARHGEF1-214ENST00000596957 GNAI2P04899 355 aa18.75■□□□□ 0.59
ARHGEF1-214ENST00000596957 CTSWP56202 376 aa18.75■□□□□ 0.59
ARHGEF1-214ENST00000596957 TGFB2P61812 414 aa18.75■□□□□ 0.59
ARHGEF1-214ENST00000596957 IRX6P78412 446 aaPredicted RBP18.75■□□□□ 0.59
ARHGEF1-214ENST00000596957 CCDC152Q4G0S7 254 aa18.75■□□□□ 0.59
ARHGEF1-214ENST00000596957 ZNF622Q969S3 477 aaKnown RBP eCLIP18.75■□□□□ 0.599e-6■■□□□ 12.8
ARHGEF1-214ENST00000596957 RIC1Q4ADV7 1423 aa18.74■□□□□ 0.59
ARHGEF1-214ENST00000596957 A0A0G2JLW4 131 aa18.74■□□□□ 0.59
ARHGEF1-214ENST00000596957 CHRNA5P30532 468 aa18.74■□□□□ 0.59
ARHGEF1-214ENST00000596957 C3orf67Q6ZVT6 689 aa18.74■□□□□ 0.59
ARHGEF1-214ENST00000596957 RBM17Q96I25 401 aaKnown RBP18.74■□□□□ 0.59
ARHGEF1-214ENST00000596957 CRBNQ96SW2 442 aa18.74■□□□□ 0.59
ARHGEF1-214ENST00000596957 LRRFIP2Q9Y608 721 aaKnown RBP18.74■□□□□ 0.59
ARHGEF1-214ENST00000596957 ZBTB7BO15156 539 aaPredicted RBP18.73■□□□□ 0.59
ARHGEF1-214ENST00000596957 NEFLP07196 543 aa18.73■□□□□ 0.59
ARHGEF1-214ENST00000596957 NPR1P16066 1061 aa18.73■□□□□ 0.59
ARHGEF1-214ENST00000596957 DPEP1P16444 411 aa18.73■□□□□ 0.59
ARHGEF1-214ENST00000596957 DDX46Q7L014 1031 aaKnown RBP18.73■□□□□ 0.59
ARHGEF1-214ENST00000596957 PLA2G12BQ9BX93 195 aa18.73■□□□□ 0.59
ARHGEF1-214ENST00000596957 BICC1Q9H694 974 aaKnown RBP18.73■□□□□ 0.59
ARHGEF1-214ENST00000596957 NRXN2Q9P2S2 1712 aa18.73■□□□□ 0.59
ARHGEF1-214ENST00000596957 LMBR1LQ6UX01 489 aa18.72■□□□□ 0.59
ARHGEF1-214ENST00000596957 MASTLQ96GX5 879 aa18.72■□□□□ 0.59
ARHGEF1-214ENST00000596957 C1orf115Q9H7X2 142 aa18.72■□□□□ 0.59
ARHGEF1-214ENST00000596957 SRGNP10124 158 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms