RNA–Protein interactions for RNA: ENST00000596580.2

FARP1-219, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5 BASIC

Gene FARP1, Length 13,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-219ENST00000596580 TCOF1Q13428 1488 aaKnown RBP9.21□□□□□ -0.93
FARP1-219ENST00000596580 IVLP07476 585 aa9.21□□□□□ -0.93
FARP1-219ENST00000596580 UQCRFS1P1P0C7P4 283 aa9.21□□□□□ -0.93
FARP1-219ENST00000596580 MAP2K1Q02750 393 aaPredicted RBP9.21□□□□□ -0.93
FARP1-219ENST00000596580 C1orf115Q9H7X2 142 aa9.21□□□□□ -0.93
FARP1-219ENST00000596580 SYCE3A1L190 88 aa9.21□□□□□ -0.93
FARP1-219ENST00000596580 NUTM2GQ5VZR2 741 aa9.21□□□□□ -0.93
FARP1-219ENST00000596580 FSD2A1L4K1 749 aa9.21□□□□□ -0.94
FARP1-219ENST00000596580 KLHL40Q2TBA0 621 aa9.21□□□□□ -0.94
FARP1-219ENST00000596580 CLIP2Q9UDT6 1046 aa9.21□□□□□ -0.94
FARP1-219ENST00000596580 RAD50Q92878 1312 aa9.21□□□□□ -0.94
FARP1-219ENST00000596580 NPC1L1Q9UHC9 1359 aa9.21□□□□□ -0.94
FARP1-219ENST00000596580 NBPF8Q3BBV2 869 aa9.21□□□□□ -0.94
FARP1-219ENST00000596580 RPGRQ92834 1020 aaKnown RBP9.21□□□□□ -0.94
FARP1-219ENST00000596580 CWC25Q9NXE8 425 aaPredicted RBP9.21□□□□□ -0.94
FARP1-219ENST00000596580 STK24Q9Y6E0 443 aa9.21□□□□□ -0.94
FARP1-219ENST00000596580 ANKS4BQ8N8V4 417 aa9.21□□□□□ -0.94
FARP1-219ENST00000596580 MATR3P43243 847 aaKnown RBP eCLIP9.21□□□□□ -0.944e-7■■■□□ 17.4
FARP1-219ENST00000596580 C6orf163Q5TEZ5 329 aa9.21□□□□□ -0.94
FARP1-219ENST00000596580 CNNM3Q8NE01 707 aa9.21□□□□□ -0.94
FARP1-219ENST00000596580 TTC14Q96N46 770 aa9.21□□□□□ -0.94
FARP1-219ENST00000596580 BABAM1Q9NWV8 329 aa9.21□□□□□ -0.94
FARP1-219ENST00000596580 CALM1P0DP23 149 aa9.2□□□□□ -0.94
FARP1-219ENST00000596580 CALM2P0DP24 149 aa9.2□□□□□ -0.94
FARP1-219ENST00000596580 CALM3P0DP25 149 aa9.2□□□□□ -0.94
FARP1-219ENST00000596580 CCDC102BQ68D86 513 aa9.2□□□□□ -0.94
FARP1-219ENST00000596580 POLR3AO14802 1390 aaPredicted RBP9.2□□□□□ -0.94
FARP1-219ENST00000596580 ALDH1L1O75891 902 aa9.2□□□□□ -0.94
FARP1-219ENST00000596580 FLIIQ13045 1269 aa9.2□□□□□ -0.94
FARP1-219ENST00000596580 JAKMIP2Q96AA8 810 aa9.2□□□□□ -0.94
FARP1-219ENST00000596580 IFFO1Q0D2I5 559 aa9.2□□□□□ -0.94
FARP1-219ENST00000596580 CLUL1Q15846 466 aa9.2□□□□□ -0.94
FARP1-219ENST00000596580 MFSD6Q6ZSS7 791 aa9.2□□□□□ -0.94
FARP1-219ENST00000596580 CALML3P27482 149 aa9.2□□□□□ -0.94
FARP1-219ENST00000596580 GSTTP1A0A1W2PQM5 241 aa9.2□□□□□ -0.94
FARP1-219ENST00000596580 STK3Q13188 491 aa9.2□□□□□ -0.94
FARP1-219ENST00000596580 RTL9Q8NET4 1388 aa9.2□□□□□ -0.94
FARP1-219ENST00000596580 SYCP2Q9BX26 1530 aa9.2□□□□□ -0.94
FARP1-219ENST00000596580 SSH1Q8WYL5 1049 aa9.2□□□□□ -0.94
FARP1-219ENST00000596580 NAP1L4Q99733 375 aaKnown RBP9.2□□□□□ -0.94
FARP1-219ENST00000596580 GLT8D2Q9H1C3 349 aa9.2□□□□□ -0.94
FARP1-219ENST00000596580 WDR62O43379 1518 aa9.2□□□□□ -0.94
FARP1-219ENST00000596580 STX6O43752 255 aa9.2□□□□□ -0.94
FARP1-219ENST00000596580 POLR3DP05423 398 aaPredicted RBP9.2□□□□□ -0.94
FARP1-219ENST00000596580 CEP112Q8N8E3 955 aa9.2□□□□□ -0.94
FARP1-219ENST00000596580 NSRP1Q9H0G5 558 aaKnown RBP9.2□□□□□ -0.94
FARP1-219ENST00000596580 TAX1BP1Q86VP1 789 aa9.19□□□□□ -0.94
FARP1-219ENST00000596580 UHRF1BP1LA0JNW5 1464 aa9.19□□□□□ -0.94
FARP1-219ENST00000596580 TBC1D5Q92609 795 aa9.19□□□□□ -0.94
FARP1-219ENST00000596580 C14orf93Q9H972 538 aaKnown RBP9.19□□□□□ -0.94
FARP1-219ENST00000596580 ABCA5Q8WWZ7 1642 aa9.19□□□□□ -0.94
FARP1-219ENST00000596580 BICDL2A1A5D9 508 aa9.19□□□□□ -0.94
FARP1-219ENST00000596580 SSBP05455 408 aaKnown RBP eCLIP9.19□□□□□ -0.94
FARP1-219ENST00000596580 MSANTD4Q8NCY6 345 aa9.19□□□□□ -0.94
FARP1-219ENST00000596580 ZSCAN29Q8IWY8 852 aaPredicted RBP9.19□□□□□ -0.94
FARP1-219ENST00000596580 TTC22Q5TAA0 569 aa9.19□□□□□ -0.94
FARP1-219ENST00000596580 LMBR1Q8WVP7 490 aa9.19□□□□□ -0.94
FARP1-219ENST00000596580 TSGA10Q9BZW7 698 aa9.19□□□□□ -0.94
FARP1-219ENST00000596580 USP25Q9UHP3 1055 aa9.19□□□□□ -0.94
FARP1-219ENST00000596580 IKBKGQ9Y6K9 419 aa9.19□□□□□ -0.94
FARP1-219ENST00000596580 WDR7Q9Y4E6 1490 aa9.19□□□□□ -0.94
FARP1-219ENST00000596580 NDC80O14777 642 aa9.19□□□□□ -0.94
FARP1-219ENST00000596580 APBB1IPQ7Z5R6 666 aaPredicted RBP9.19□□□□□ -0.94
FARP1-219ENST00000596580 ABCC1P33527 1531 aa9.19□□□□□ -0.94
FARP1-219ENST00000596580 MYO1BO43795 1136 aa9.19□□□□□ -0.94
FARP1-219ENST00000596580 TUBB2AQ13885 445 aa9.19□□□□□ -0.94
FARP1-219ENST00000596580 PIBF1Q8WXW3 757 aa9.19□□□□□ -0.94
FARP1-219ENST00000596580 TBC1D32Q96NH3 1257 aa9.19□□□□□ -0.94
FARP1-219ENST00000596580 TUBB2BQ9BVA1 445 aa9.19□□□□□ -0.94
FARP1-219ENST00000596580 PRAG1Q86YV5 1406 aa9.19□□□□□ -0.94
FARP1-219ENST00000596580 RBM26Q5T8P6 1007 aaKnown RBP9.19□□□□□ -0.94
FARP1-219ENST00000596580 SNX21Q969T3 373 aa9.18□□□□□ -0.94
FARP1-219ENST00000596580 IQCDQ96DY2 449 aa9.18□□□□□ -0.94
FARP1-219ENST00000596580 TRAPPC8Q9Y2L5 1435 aa9.18□□□□□ -0.94
FARP1-219ENST00000596580 BICDL1Q6ZP65 573 aa9.18□□□□□ -0.94
FARP1-219ENST00000596580 PLCH2O75038 1416 aa9.18□□□□□ -0.94
FARP1-219ENST00000596580 NOS1P29475 1434 aa9.18□□□□□ -0.94
FARP1-219ENST00000596580 TRIM27P14373 513 aa9.18□□□□□ -0.94
FARP1-219ENST00000596580 FERP16591 822 aa9.18□□□□□ -0.94
FARP1-219ENST00000596580 KIF4BQ2VIQ3 1234 aa9.18□□□□□ -0.94
FARP1-219ENST00000596580 INTS4Q96HW7 963 aaKnown RBP9.18□□□□□ -0.94
FARP1-219ENST00000596580 CRNKL1Q9BZJ0 848 aaKnown RBP9.18□□□□□ -0.94
FARP1-219ENST00000596580 AOX1Q06278 1338 aa9.18□□□□□ -0.94
FARP1-219ENST00000596580 RBM25P49756 843 aaKnown RBP9.18□□□□□ -0.94
FARP1-219ENST00000596580 PIP4K2BP78356 416 aa9.18□□□□□ -0.94
FARP1-219ENST00000596580 A2MP01023 1474 aa9.18□□□□□ -0.94
FARP1-219ENST00000596580 SNRPA1P09661 255 aaKnown RBP9.18□□□□□ -0.94
FARP1-219ENST00000596580 UBA7P41226 1012 aa9.18□□□□□ -0.94
FARP1-219ENST00000596580 FERMT2Q96AC1 680 aa9.18□□□□□ -0.94
FARP1-219ENST00000596580 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.18□□□□□ -0.94
FARP1-219ENST00000596580 V9GYY5 206 aaPredicted RBP9.18□□□□□ -0.94
FARP1-219ENST00000596580 PRPF40BQ6NWY9 871 aaKnown RBP9.18□□□□□ -0.94
FARP1-219ENST00000596580 ESR2Q92731 530 aa9.18□□□□□ -0.94
FARP1-219ENST00000596580 ATP2A1O14983 1001 aa9.18□□□□□ -0.94
FARP1-219ENST00000596580 CCDC152Q4G0S7 254 aa9.18□□□□□ -0.94
FARP1-219ENST00000596580 SELENOOQ9BVL4 669 aa9.18□□□□□ -0.94
FARP1-219ENST00000596580 PARD3Q8TEW0 1356 aa9.17□□□□□ -0.94
FARP1-219ENST00000596580 IARSP41252 1262 aaKnown RBP9.17□□□□□ -0.94
FARP1-219ENST00000596580 IFNL2Q8IZJ0 200 aa9.17□□□□□ -0.94
FARP1-219ENST00000596580 TBCAO75347 108 aaKnown RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms