RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 AMPHP49418 695 aa4.51□□□□□ -1.69
VRK3-204ENST00000593912 BCAMP50895 628 aa4.51□□□□□ -1.69
VRK3-204ENST00000593912 MKRN3Q13064 507 aaKnown RBP4.51□□□□□ -1.69
VRK3-204ENST00000593912 NKX1-1Q15270 411 aaPredicted RBP4.51□□□□□ -1.69
VRK3-204ENST00000593912 SOGA3Q5TF21 947 aa4.51□□□□□ -1.69
VRK3-204ENST00000593912 PRR5LQ6MZQ0 368 aa4.51□□□□□ -1.69
VRK3-204ENST00000593912 GPR153Q6NV75 609 aa4.51□□□□□ -1.69
VRK3-204ENST00000593912 INTS5Q6P9B9 1019 aaKnown RBP4.51□□□□□ -1.69
VRK3-204ENST00000593912 CDC37L1Q7L3B6 337 aa4.51□□□□□ -1.69
VRK3-204ENST00000593912 C2orf69Q8N8R5 385 aa4.51□□□□□ -1.69
VRK3-204ENST00000593912 DCAF11Q8TEB1 546 aa4.51□□□□□ -1.69
VRK3-204ENST00000593912 JDP2Q8WYK2 163 aa4.51□□□□□ -1.69
VRK3-204ENST00000593912 ZNF333Q96JL9 665 aa4.51□□□□□ -1.69
VRK3-204ENST00000593912 PGAP2Q9UHJ9 254 aa4.51□□□□□ -1.69
VRK3-204ENST00000593912 PTPN22Q9Y2R2 807 aa4.51□□□□□ -1.69
VRK3-204ENST00000593912 CACNA1GO43497 2377 aa4.51□□□□□ -1.69
VRK3-204ENST00000593912 SBNO2Q9Y2G9 1366 aa4.51□□□□□ -1.69
VRK3-204ENST00000593912 ALPK3Q96L96 1907 aa4.5□□□□□ -1.69
VRK3-204ENST00000593912 MRC1P22897 1456 aa4.5□□□□□ -1.69
VRK3-204ENST00000593912 SOS1Q07889 1333 aaPredicted RBP4.5□□□□□ -1.69
VRK3-204ENST00000593912 CENPJQ9HC77 1338 aaPredicted RBP4.5□□□□□ -1.69
VRK3-204ENST00000593912 IRS2Q9Y4H2 1338 aa4.5□□□□□ -1.69
VRK3-204ENST00000593912 SNED1Q8TER0 1413 aa4.5□□□□□ -1.69
VRK3-204ENST00000593912 ECM2O94769 699 aaPredicted RBP4.5□□□□□ -1.69
VRK3-204ENST00000593912 TBC1D9BQ66K14 1250 aa4.5□□□□□ -1.69
VRK3-204ENST00000593912 STYK1Q6J9G0 422 aa4.5□□□□□ -1.69
VRK3-204ENST00000593912 CD99L2Q8TCZ2 262 aa4.5□□□□□ -1.69
VRK3-204ENST00000593912 SYMPKQ92797 1274 aaKnown RBP4.5□□□□□ -1.69
VRK3-204ENST00000593912 SHISA4Q96DD7 197 aa4.5□□□□□ -1.69
VRK3-204ENST00000593912 BRIP1Q9BX63 1249 aa4.5□□□□□ -1.69
VRK3-204ENST00000593912 NARFQ9UHQ1 456 aa4.5□□□□□ -1.69
VRK3-204ENST00000593912 BDP1A6H8Y1 2624 aa4.5□□□□□ -1.69
VRK3-204ENST00000593912 COL15A1P39059 1388 aa4.5□□□□□ -1.69
VRK3-204ENST00000593912 KDM3BQ7LBC6 1761 aa4.5□□□□□ -1.69
VRK3-204ENST00000593912 MUC6Q6W4X9 2439 aa4.5□□□□□ -1.69
VRK3-204ENST00000593912 ZNF609O15014 1411 aa4.49□□□□□ -1.69
VRK3-204ENST00000593912 GMPSP49915 693 aaPredicted RBP4.49□□□□□ -1.69
VRK3-204ENST00000593912 RRS1Q15050 365 aaKnown RBP4.49□□□□□ -1.69
VRK3-204ENST00000593912 NOM1Q5C9Z4 860 aaKnown RBP4.49□□□□□ -1.69
VRK3-204ENST00000593912 MOB2Q70IA6 237 aa4.49□□□□□ -1.69
VRK3-204ENST00000593912 MAFAQ8NHW3 353 aaPredicted RBP4.49□□□□□ -1.69
VRK3-204ENST00000593912 MASTLQ96GX5 879 aa4.49□□□□□ -1.69
VRK3-204ENST00000593912 MPHOSPH9Q99550 1183 aa4.49□□□□□ -1.69
VRK3-204ENST00000593912 ZSWIM8A7E2V4 1837 aa4.49□□□□□ -1.69
VRK3-204ENST00000593912 SCN7AQ01118 1682 aa4.48□□□□□ -1.69
VRK3-204ENST00000593912 PHKG2P15735 406 aa4.48□□□□□ -1.69
VRK3-204ENST00000593912 KRT26Q7Z3Y9 468 aa4.48□□□□□ -1.69
VRK3-204ENST00000593912 DNAJC10Q8IXB1 793 aa4.48□□□□□ -1.69
VRK3-204ENST00000593912 REM2Q8IYK8 340 aaPredicted RBP4.48□□□□□ -1.69
VRK3-204ENST00000593912 LARGE2Q8N3Y3 721 aa4.48□□□□□ -1.69
VRK3-204ENST00000593912 P2RX7Q99572 595 aaKnown RBP4.48□□□□□ -1.69
VRK3-204ENST00000593912 PDZRN3Q9UPQ7 1066 aa4.48□□□□□ -1.69
VRK3-204ENST00000593912 ZBTB12Q9Y330 459 aaPredicted RBP4.48□□□□□ -1.69
VRK3-204ENST00000593912 NR2E3Q9Y5X4 410 aa4.48□□□□□ -1.69
VRK3-204ENST00000593912 PTCH2Q9Y6C5 1203 aa4.48□□□□□ -1.69
VRK3-204ENST00000593912 CFAP54Q96N23 3096 aa4.47□□□□□ -1.69
VRK3-204ENST00000593912 WDFY4Q6ZS81 3184 aa4.47□□□□□ -1.69
VRK3-204ENST00000593912 BAHCC1Q9P281 2608 aa4.47□□□□□ -1.69
VRK3-204ENST00000593912 PKD1L2Q7Z442 2459 aa4.47□□□□□ -1.69
VRK3-204ENST00000593912 LOC105371045A0A1W2PR82 267 aa4.47□□□□□ -1.69
VRK3-204ENST00000593912 EGFRP00533 1210 aa4.47□□□□□ -1.69
VRK3-204ENST00000593912 TM4SF4P48230 202 aa4.47□□□□□ -1.69
VRK3-204ENST00000593912 MRE11P49959 708 aa4.47□□□□□ -1.69
VRK3-204ENST00000593912 LRIT3Q3SXY7 679 aa4.47□□□□□ -1.69
VRK3-204ENST00000593912 SLC9C1Q4G0N8 1177 aa4.47□□□□□ -1.69
VRK3-204ENST00000593912 TJAP1Q5JTD0 557 aa4.47□□□□□ -1.69
VRK3-204ENST00000593912 RTKN2Q8IZC4 609 aa4.47□□□□□ -1.69
VRK3-204ENST00000593912 SH3TC2Q8TF17 1288 aa4.47□□□□□ -1.69
VRK3-204ENST00000593912 ZC3H15Q8WU90 426 aaKnown RBP4.47□□□□□ -1.69
VRK3-204ENST00000593912 GDF15Q99988 308 aa4.47□□□□□ -1.69
VRK3-204ENST00000593912 EFCC1Q9HA90 598 aa4.47□□□□□ -1.69
VRK3-204ENST00000593912 ZBTB1Q9Y2K1 713 aa4.47□□□□□ -1.69
VRK3-204ENST00000593912 HCN4Q9Y3Q4 1203 aa4.47□□□□□ -1.69
VRK3-204ENST00000593912 NPC1L1Q9UHC9 1359 aa4.47□□□□□ -1.69
VRK3-204ENST00000593912 EVC2Q86UK5 1308 aa4.46□□□□□ -1.69
VRK3-204ENST00000593912 NPHP1O15259 732 aa4.46□□□□□ -1.7
VRK3-204ENST00000593912 CXCL9Q07325 125 aa4.46□□□□□ -1.7
VRK3-204ENST00000593912 MTFR1Q15390 333 aa4.46□□□□□ -1.7
VRK3-204ENST00000593912 TBC1D10BQ4KMP7 808 aaPredicted RBP4.46□□□□□ -1.7
VRK3-204ENST00000593912 HSP90AB2PQ58FF8 381 aa4.46□□□□□ -1.7
VRK3-204ENST00000593912 SAMD7Q7Z3H4 446 aa4.46□□□□□ -1.7
VRK3-204ENST00000593912 UBE2Q1Q7Z7E8 422 aa4.46□□□□□ -1.7
VRK3-204ENST00000593912 NIM1KQ8IY84 436 aa4.46□□□□□ -1.7
VRK3-204ENST00000593912 CNBD1Q8NA66 436 aa4.46□□□□□ -1.7
VRK3-204ENST00000593912 COL26A1Q96A83 441 aa4.46□□□□□ -1.7
VRK3-204ENST00000593912 PSMD1Q99460 953 aa4.46□□□□□ -1.7
VRK3-204ENST00000593912 CDX2Q99626 313 aaPredicted RBP4.46□□□□□ -1.7
VRK3-204ENST00000593912 HTATIP2Q9BUP3 242 aa4.46□□□□□ -1.7
VRK3-204ENST00000593912 CFHR5Q9BXR6 569 aa4.46□□□□□ -1.7
VRK3-204ENST00000593912 ZMYND8Q9ULU4 1186 aaPredicted RBP4.46□□□□□ -1.7
VRK3-204ENST00000593912 SPG7Q9UQ90 795 aa4.46□□□□□ -1.7
VRK3-204ENST00000593912 EDC4Q6P2E9 1401 aaKnown RBP4.46□□□□□ -1.7
VRK3-204ENST00000593912 ASTN2O75129 1339 aaPredicted RBP4.46□□□□□ -1.7
VRK3-204ENST00000593912 USP34Q70CQ2 3546 aa4.45□□□□□ -1.7
VRK3-204ENST00000593912 A0A1W2PP64 1363 aa4.45□□□□□ -1.7
VRK3-204ENST00000593912 RTL1A6NKG5 1358 aa4.45□□□□□ -1.7
VRK3-204ENST00000593912 ZFHX4Q86UP3 3567 aa4.45□□□□□ -1.7
VRK3-204ENST00000593912 UBE2Q2LH0YL09 131 aa4.45□□□□□ -1.7
VRK3-204ENST00000593912 POTEB2H3BUK9 544 aa4.45□□□□□ -1.7
VRK3-204ENST00000593912 EVI5O60447 810 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms