RNA–Protein interactions for RNA: ENST00000592763.5

ILF3-222, Transcript of interleukin enhancer binding factor 3, human

TSL 5 BASIC

Gene ILF3, Length 3,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ILF3-222	ENST00000592763	CCDC87	Q9NVE4	849 aa		13.07	□□□□□ -0.32
ILF3-222	ENST00000592763	ZNF652	Q9Y2D9	606 aa		13.07	□□□□□ -0.32
ILF3-222	ENST00000592763		K7ELQ4	463 aa	Predicted RBP	13.07	□□□□□ -0.32
ILF3-222	ENST00000592763	HSPA1L	P34931	641 aa		13.07	□□□□□ -0.32
ILF3-222	ENST00000592763	CRKL	P46109	303 aa	Known RBP	13.07	□□□□□ -0.32
ILF3-222	ENST00000592763	LRRC24	Q50LG9	513 aa		13.07	□□□□□ -0.32
ILF3-222	ENST00000592763	SMARCC1	Q92922	1105 aa	Predicted RBP	13.06	□□□□□ -0.32
ILF3-222	ENST00000592763	PUS3	Q9BZE2	481 aa	Known RBP	13.06	□□□□□ -0.32
ILF3-222	ENST00000592763	CCNL1	Q9UK58	526 aa	Predicted RBP	13.06	□□□□□ -0.32
ILF3-222	ENST00000592763	TOPAZ1	Q8N9V7	1692 aa		13.06	□□□□□ -0.32
ILF3-222	ENST00000592763	CAMTA1	Q9Y6Y1	1673 aa		13.06	□□□□□ -0.32
ILF3-222	ENST00000592763	TCEANC2	Q96MN5	208 aa		13.06	□□□□□ -0.32
ILF3-222	ENST00000592763	JAKMIP1	Q96N16	626 aa	Known RBP	13.06	□□□□□ -0.32
ILF3-222	ENST00000592763	COL5A2	P05997	1499 aa	Predicted RBP	13.05	□□□□□ -0.32
ILF3-222	ENST00000592763	ZNF142	P52746	1687 aa	Predicted RBP	13.05	□□□□□ -0.32
ILF3-222	ENST00000592763	EVI5L	Q96CN4	794 aa		13.05	□□□□□ -0.32
ILF3-222	ENST00000592763	AK7	Q96M32	723 aa		13.05	□□□□□ -0.32
ILF3-222	ENST00000592763	ITGA6	P23229	1130 aa		13.05	□□□□□ -0.32
ILF3-222	ENST00000592763	RFC4	P35249	363 aa		13.05	□□□□□ -0.32
ILF3-222	ENST00000592763	IGHMBP2	P38935	993 aa	Known RBP	13.05	□□□□□ -0.32
ILF3-222	ENST00000592763	RNF20	Q5VTR2	975 aa		13.05	□□□□□ -0.32
ILF3-222	ENST00000592763	USP26	Q9BXU7	913 aa		13.05	□□□□□ -0.32
ILF3-222	ENST00000592763	QTRT2	Q9H974	415 aa	Known RBP	13.05	□□□□□ -0.32
ILF3-222	ENST00000592763	SASH1	O94885	1247 aa		13.04	□□□□□ -0.32
ILF3-222	ENST00000592763	GBP4	Q96PP9	640 aa		13.04	□□□□□ -0.32
ILF3-222	ENST00000592763	ABCF2	Q9UG63	623 aa		13.04	□□□□□ -0.32
ILF3-222	ENST00000592763	RGS12	O14924	1447 aa		13.04	□□□□□ -0.32
ILF3-222	ENST00000592763	CAST	P20810	708 aa	Known RBP	13.04	□□□□□ -0.32
ILF3-222	ENST00000592763	STK3	Q13188	491 aa		13.04	□□□□□ -0.32
ILF3-222	ENST00000592763	TNNI3K	Q59H18	835 aa		13.04	□□□□□ -0.32
ILF3-222	ENST00000592763	FAM227B	Q96M60	508 aa		13.04	□□□□□ -0.32
ILF3-222	ENST00000592763	FPGT-TNNI3K	V9GXZ4	949 aa		13.04	□□□□□ -0.32
ILF3-222	ENST00000592763	ATP10D	Q9P241	1426 aa		13.04	□□□□□ -0.32
ILF3-222	ENST00000592763	SPATA31A1	Q5TZJ5	1347 aa		13.04	□□□□□ -0.32
ILF3-222	ENST00000592763	IL15	P40933	162 aa	Predicted RBP	13.04	□□□□□ -0.32
ILF3-222	ENST00000592763	FOSB	P53539	338 aa		13.04	□□□□□ -0.32
ILF3-222	ENST00000592763	NBPF5P	Q86XG9	351 aa	Predicted RBP	13.04	□□□□□ -0.32
ILF3-222	ENST00000592763	UTP14A	Q9BVJ6	771 aa	Known RBP	13.04	□□□□□ -0.32
ILF3-222	ENST00000592763	OVOS2	A0A0G2JMS6	1433 aa		13.03	□□□□□ -0.32
ILF3-222	ENST00000592763		A0A1B0GUL7	405 aa		13.03	□□□□□ -0.32
ILF3-222	ENST00000592763	CPA1	P15085	419 aa		13.03	□□□□□ -0.32
ILF3-222	ENST00000592763	CERK	Q8TCT0	537 aa		13.03	□□□□□ -0.32
ILF3-222	ENST00000592763	MED1	Q15648	1581 aa	Predicted RBP	13.03	□□□□□ -0.32
ILF3-222	ENST00000592763	EYA2	O00167	538 aa		13.03	□□□□□ -0.32
ILF3-222	ENST00000592763	TAF5L	O75529	589 aa		13.03	□□□□□ -0.32
ILF3-222	ENST00000592763	POLA2	Q14181	598 aa		13.03	□□□□□ -0.32
ILF3-222	ENST00000592763	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.03	□□□□□ -0.32
ILF3-222	ENST00000592763	MAP3K15	Q6ZN16	1313 aa		13.03	□□□□□ -0.32
ILF3-222	ENST00000592763	NMI	Q13287	307 aa	Predicted RBP	13.02	□□□□□ -0.32
ILF3-222	ENST00000592763	AKAP2	Q9Y2D5	859 aa		13.02	□□□□□ -0.32
ILF3-222	ENST00000592763	RTCB	Q9Y3I0	505 aa	Known RBP	13.02	□□□□□ -0.32
ILF3-222	ENST00000592763	HIP1	O00291	1037 aa		13.02	□□□□□ -0.33
ILF3-222	ENST00000592763	KDM4A	O75164	1064 aa		13.02	□□□□□ -0.33
ILF3-222	ENST00000592763	CYP19A1	P11511	503 aa	Predicted RBP	13.02	□□□□□ -0.33
ILF3-222	ENST00000592763	PTPN12	Q05209	780 aa	Known RBP	13.02	□□□□□ -0.33
ILF3-222	ENST00000592763	ATP2B3	Q16720	1220 aa		13.02	□□□□□ -0.33
ILF3-222	ENST00000592763	SETDB2	Q96T68	719 aa		13.02	□□□□□ -0.33
ILF3-222	ENST00000592763	GREM2	Q9H772	168 aa		13.02	□□□□□ -0.33
ILF3-222	ENST00000592763	PPFIA3	O75145	1194 aa		13.02	□□□□□ -0.33
ILF3-222	ENST00000592763	FBXW7	Q969H0	707 aa		13.02	□□□□□ -0.33
ILF3-222	ENST00000592763	SH3TC1	Q8TE82	1336 aa		13.02	□□□□□ -0.33
ILF3-222	ENST00000592763	AFF2	P51816	1311 aa		13.01	□□□□□ -0.33
ILF3-222	ENST00000592763	ERBB4	Q15303	1308 aa		13.01	□□□□□ -0.33
ILF3-222	ENST00000592763	NKX1-1	Q15270	411 aa	Predicted RBP	13.01	□□□□□ -0.33
ILF3-222	ENST00000592763	CCDC129	Q6ZRS4	1044 aa		13.01	□□□□□ -0.33
ILF3-222	ENST00000592763	SNAP23	O00161	211 aa		13.01	□□□□□ -0.33
ILF3-222	ENST00000592763	KAZALD1	Q96I82	304 aa		13.01	□□□□□ -0.33
ILF3-222	ENST00000592763	DBNL	Q9UJU6	430 aa	Known RBP	13.01	□□□□□ -0.33
ILF3-222	ENST00000592763	TTC41P	Q6P2S7	1318 aa		13.01	□□□□□ -0.33
ILF3-222	ENST00000592763	LTN1	O94822	1766 aa		13	□□□□□ -0.33
ILF3-222	ENST00000592763	LRRFIP1	Q32MZ4	808 aa	Known RBP	13	□□□□□ -0.33
ILF3-222	ENST00000592763	SEPT12	Q8IYM1	358 aa		13	□□□□□ -0.33
ILF3-222	ENST00000592763	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13	□□□□□ -0.33
ILF3-222	ENST00000592763	PALLD	Q8WX93	1383 aa		13	□□□□□ -0.33
ILF3-222	ENST00000592763		G3V3G9	751 aa		13	□□□□□ -0.33
ILF3-222	ENST00000592763	DCAF8	Q5TAQ9	597 aa		13	□□□□□ -0.33
ILF3-222	ENST00000592763	DLG5	Q8TDM6	1919 aa		13	□□□□□ -0.33
ILF3-222	ENST00000592763	VPS37C	A5D8V6	355 aa	Predicted RBP	13	□□□□□ -0.33
ILF3-222	ENST00000592763	TRIM37	O94972	964 aa		13	□□□□□ -0.33
ILF3-222	ENST00000592763	CHAF1A	Q13111	956 aa	Predicted RBP	13	□□□□□ -0.33
ILF3-222	ENST00000592763	NLRP10	Q86W26	655 aa		13	□□□□□ -0.33
ILF3-222	ENST00000592763	THRAP3	Q9Y2W1	955 aa	Known RBP	13	□□□□□ -0.33
ILF3-222	ENST00000592763	CYP46A1	Q9Y6A2	500 aa		13	□□□□□ -0.33
ILF3-222	ENST00000592763	HAND2	P61296	217 aa		12.99	□□□□□ -0.33
ILF3-222	ENST00000592763	LRP2BP	Q9P2M1	347 aa		12.99	□□□□□ -0.33
ILF3-222	ENST00000592763	PALD1	Q9ULE6	856 aa		12.99	□□□□□ -0.33
ILF3-222	ENST00000592763	CD2BP2	O95400	341 aa	Known RBP	12.99	□□□□□ -0.33
ILF3-222	ENST00000592763	IL6ST	P40189	918 aa	Predicted RBP	12.99	□□□□□ -0.33
ILF3-222	ENST00000592763	RBM25	P49756	843 aa	Known RBP	12.99	□□□□□ -0.33
ILF3-222	ENST00000592763	MCTP1	Q6DN14	999 aa		12.99	□□□□□ -0.33
ILF3-222	ENST00000592763	JAG2	Q9Y219	1238 aa		12.99	□□□□□ -0.33
ILF3-222	ENST00000592763	SLIT3	O75094	1523 aa		12.99	□□□□□ -0.33
ILF3-222	ENST00000592763	NWD1	Q149M9	1564 aa		12.99	□□□□□ -0.33
ILF3-222	ENST00000592763	CCDC152	Q4G0S7	254 aa		12.99	□□□□□ -0.33
ILF3-222	ENST00000592763	USPL1	Q5W0Q7	1092 aa		12.99	□□□□□ -0.33
ILF3-222	ENST00000592763	SEC62	Q99442	399 aa	Known RBP	12.99	□□□□□ -0.33
ILF3-222	ENST00000592763	COPRS	Q9NQ92	184 aa		12.99	□□□□□ -0.33
ILF3-222	ENST00000592763	SRP68	Q9UHB9	627 aa	Known RBP	12.99	□□□□□ -0.33
ILF3-222	ENST00000592763		H7C1W4	665 aa		12.98	□□□□□ -0.33
ILF3-222	ENST00000592763	PTF1A	Q7RTS3	328 aa		12.98	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms