RNA–Protein interactions for RNA: ENST00000592354.5

CAPNS1-213, Transcript of calpain small subunit 1, humanhuman

TSL 2

Gene CAPNS1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-213ENST00000592354 BABAM1Q9NWV8 329 aa17.67■□□□□ 0.42
CAPNS1-213ENST00000592354 ADAMTS8Q9UP79 889 aa17.67■□□□□ 0.42
CAPNS1-213ENST00000592354 TRIM35Q9UPQ4 493 aa17.67■□□□□ 0.42
CAPNS1-213ENST00000592354 AIMP1Q12904 312 aaKnown RBP17.66■□□□□ 0.42
CAPNS1-213ENST00000592354 C3orf67Q6ZVT6 689 aa17.66■□□□□ 0.42
CAPNS1-213ENST00000592354 RTKN2Q8IZC4 609 aa17.66■□□□□ 0.42
CAPNS1-213ENST00000592354 POTEIP0CG38 1075 aa17.65■□□□□ 0.42
CAPNS1-213ENST00000592354 POTEJP0CG39 1038 aa17.65■□□□□ 0.42
CAPNS1-213ENST00000592354 KLRG1Q96E93 195 aa17.65■□□□□ 0.42
CAPNS1-213ENST00000592354 PRKRIP1Q9H875 184 aaPredicted RBP17.65■□□□□ 0.42
CAPNS1-213ENST00000592354 DDX60Q8IY21 1712 aaKnown RBP17.64■□□□□ 0.41
CAPNS1-213ENST00000592354 TCERG1O14776 1098 aaKnown RBP17.64■□□□□ 0.41
CAPNS1-213ENST00000592354 IARSP41252 1262 aaKnown RBP17.64■□□□□ 0.41
CAPNS1-213ENST00000592354 PPP1R42Q7Z4L9 355 aa17.64■□□□□ 0.41
CAPNS1-213ENST00000592354 SYNE4Q8N205 404 aa17.64■□□□□ 0.41
CAPNS1-213ENST00000592354 XAGE3Q8WTP9 111 aa17.64■□□□□ 0.41
CAPNS1-213ENST00000592354 CHL1O00533 1208 aa17.63■□□□□ 0.41
CAPNS1-213ENST00000592354 PPEF1O14829 653 aaPredicted RBP17.63■□□□□ 0.41
CAPNS1-213ENST00000592354 ZEB1P37275 1124 aaPredicted RBP17.63■□□□□ 0.41
CAPNS1-213ENST00000592354 PARP10Q53GL7 1025 aa17.63■□□□□ 0.41
CAPNS1-213ENST00000592354 COPS6Q7L5N1 327 aa17.63■□□□□ 0.41
CAPNS1-213ENST00000592354 ZNF428Q96B54 188 aa17.63■□□□□ 0.41
CAPNS1-213ENST00000592354 CHPF2Q9P2E5 772 aa17.63■□□□□ 0.41
CAPNS1-213ENST00000592354 ADAMTSL1Q8N6G6 1762 aa17.63■□□□□ 0.41
CAPNS1-213ENST00000592354 TAF1P21675 1872 aa17.63■□□□□ 0.41
CAPNS1-213ENST00000592354 RBM17Q96I25 401 aaKnown RBP17.62■□□□□ 0.41
CAPNS1-213ENST00000592354 UTP14AQ9BVJ6 771 aaKnown RBP17.62■□□□□ 0.41
CAPNS1-213ENST00000592354 HOXA10P31260 410 aaPredicted RBP17.61■□□□□ 0.41
CAPNS1-213ENST00000592354 DDX21Q9NR30 783 aaKnown RBP eCLIP17.61■□□□□ 0.41
CAPNS1-213ENST00000592354 LTBP1Q14766 1721 aa17.61■□□□□ 0.41
CAPNS1-213ENST00000592354 IQCA1LA6NCM1 817 aa17.6■□□□□ 0.41
CAPNS1-213ENST00000592354 HDGFL1Q5TGJ6 251 aa17.6■□□□□ 0.41
CAPNS1-213ENST00000592354 CHADLQ6NUI6 762 aa17.6■□□□□ 0.41
CAPNS1-213ENST00000592354 L3MBTL3Q96JM7 780 aaPredicted RBP17.6■□□□□ 0.41
CAPNS1-213ENST00000592354 CRAMP1Q96RY5 1269 aa17.6■□□□□ 0.41
CAPNS1-213ENST00000592354 PSMD1Q99460 953 aa17.6■□□□□ 0.41
CAPNS1-213ENST00000592354 RNF123Q5XPI4 1314 aa17.6■□□□□ 0.41
CAPNS1-213ENST00000592354 ABCC4O15439 1325 aa17.59■□□□□ 0.41
CAPNS1-213ENST00000592354 EAPPQ56P03 285 aaPredicted RBP17.59■□□□□ 0.41
CAPNS1-213ENST00000592354 HSP90AB3PQ58FF7 597 aa17.59■□□□□ 0.41
CAPNS1-213ENST00000592354 IFFO2Q5TF58 517 aa17.59■□□□□ 0.41
CAPNS1-213ENST00000592354 NLRP10Q86W26 655 aa17.59■□□□□ 0.41
CAPNS1-213ENST00000592354 NLRP3Q96P20 1036 aa17.59■□□□□ 0.41
CAPNS1-213ENST00000592354 TAF1DQ9H5J8 278 aaPredicted RBP17.59■□□□□ 0.41
CAPNS1-213ENST00000592354 LRRC37AA6NMS7 1700 aa17.58■□□□□ 0.41
CAPNS1-213ENST00000592354 HCLS1P14317 486 aaPredicted RBP17.58■□□□□ 0.4
CAPNS1-213ENST00000592354 CC2D2BQ6DHV5 1058 aa17.58■□□□□ 0.4
CAPNS1-213ENST00000592354 JMYQ8N9B5 988 aa17.58■□□□□ 0.4
CAPNS1-213ENST00000592354 MBIPQ9NS73 344 aa17.58■□□□□ 0.4
CAPNS1-213ENST00000592354 FZD9O00144 591 aa17.57■□□□□ 0.4
CAPNS1-213ENST00000592354 APAF1O14727 1248 aa17.57■□□□□ 0.4
CAPNS1-213ENST00000592354 JDP2Q8WYK2 163 aa17.57■□□□□ 0.4
CAPNS1-213ENST00000592354 CFAP44Q96MT7 982 aa17.57■□□□□ 0.4
CAPNS1-213ENST00000592354 COL4A1P02462 1669 aa17.57■□□□□ 0.4
CAPNS1-213ENST00000592354 TCIRG1Q13488 830 aa17.56■□□□□ 0.4
CAPNS1-213ENST00000592354 LDHDQ86WU2 507 aa17.56■□□□□ 0.4
CAPNS1-213ENST00000592354 LARGE2Q8N3Y3 721 aa17.56■□□□□ 0.4
CAPNS1-213ENST00000592354 TRMT112Q9UI30 125 aaKnown RBP17.56■□□□□ 0.4
CAPNS1-213ENST00000592354 HACL1Q9UJ83 578 aa17.56■□□□□ 0.4
CAPNS1-213ENST00000592354 GJA3Q9Y6H8 435 aa17.56■□□□□ 0.4
CAPNS1-213ENST00000592354 SH3TC1Q8TE82 1336 aa17.55■□□□□ 0.4
CAPNS1-213ENST00000592354 DUOX1Q9NRD9 1551 aa17.55■□□□□ 0.4
CAPNS1-213ENST00000592354 HOXB7P09629 217 aa17.55■□□□□ 0.4
CAPNS1-213ENST00000592354 EPHX2P34913 555 aa17.55■□□□□ 0.4
CAPNS1-213ENST00000592354 SLC10A5Q5PT55 438 aa17.55■□□□□ 0.4
CAPNS1-213ENST00000592354 DUSP27Q5VZP5 1158 aa17.55■□□□□ 0.4
CAPNS1-213ENST00000592354 GPC2Q8N158 579 aa17.55■□□□□ 0.4
CAPNS1-213ENST00000592354 PLBD2Q8NHP8 589 aa17.55■□□□□ 0.4
CAPNS1-213ENST00000592354 DBF4Q9UBU7 674 aaPredicted RBP17.55■□□□□ 0.4
CAPNS1-213ENST00000592354 ATP5J2-PTCD1G3V325 749 aa17.54■□□□□ 0.4
CAPNS1-213ENST00000592354 PPIP5K2O43314 1243 aa17.54■□□□□ 0.4
CAPNS1-213ENST00000592354 EIF6P56537 245 aaKnown RBP17.54■□□□□ 0.4
CAPNS1-213ENST00000592354 AOC3Q16853 763 aa17.54■□□□□ 0.4
CAPNS1-213ENST00000592354 ATP6V0A2Q9Y487 856 aa17.54■□□□□ 0.4
CAPNS1-213ENST00000592354 NIM1KQ8IY84 436 aa17.53■□□□□ 0.4
CAPNS1-213ENST00000592354 TMX4Q9H1E5 349 aaPredicted RBP17.53■□□□□ 0.4
CAPNS1-213ENST00000592354 MKRN1Q9UHC7 482 aaKnown RBP17.53■□□□□ 0.4
CAPNS1-213ENST00000592354 CLEC11AQ9Y240 323 aa17.53■□□□□ 0.4
CAPNS1-213ENST00000592354 PASKQ96RG2 1323 aa17.52■□□□□ 0.4
CAPNS1-213ENST00000592354 PCNTO95613 3336 aa17.52■□□□□ 0.4
CAPNS1-213ENST00000592354 ELL2O00472 640 aaPredicted RBP17.52■□□□□ 0.4
CAPNS1-213ENST00000592354 ZNF853P0CG23 659 aa17.52■□□□□ 0.4
CAPNS1-213ENST00000592354 GRIPAP1Q4V328 841 aa17.52■□□□□ 0.4
CAPNS1-213ENST00000592354 CCDC184Q52MB2 194 aa17.52■□□□□ 0.4
CAPNS1-213ENST00000592354 ANKRD13DQ6ZTN6 518 aa17.52■□□□□ 0.4
CAPNS1-213ENST00000592354 CREBZFQ9NS37 354 aa17.52■□□□□ 0.4
CAPNS1-213ENST00000592354 IFT57Q9NWB7 429 aa17.52■□□□□ 0.4
CAPNS1-213ENST00000592354 RTL5Q5HYW3 569 aaPredicted RBP17.51■□□□□ 0.39
CAPNS1-213ENST00000592354 DDX46Q7L014 1031 aaKnown RBP17.51■□□□□ 0.39
CAPNS1-213ENST00000592354 FAM89AQ96GI7 184 aa17.51■□□□□ 0.39
CAPNS1-213ENST00000592354 ISCA1Q9BUE6 129 aa17.51■□□□□ 0.39
CAPNS1-213ENST00000592354 HYPKQ9NX55 129 aa17.51■□□□□ 0.39
CAPNS1-213ENST00000592354 LMOD1P29536 600 aaPredicted RBP17.5■□□□□ 0.39
CAPNS1-213ENST00000592354 SCNN1DP51172 638 aa17.5■□□□□ 0.39
CAPNS1-213ENST00000592354 GNAI1P63096 354 aa17.5■□□□□ 0.39
CAPNS1-213ENST00000592354 GRAPQ13588 217 aa17.5■□□□□ 0.39
CAPNS1-213ENST00000592354 DPP8Q6V1X1 898 aaPredicted RBP17.5■□□□□ 0.39
CAPNS1-213ENST00000592354 GRAPLQ8TC17 118 aaPredicted RBP17.5■□□□□ 0.39
CAPNS1-213ENST00000592354 PHAXQ9H814 394 aaKnown RBP17.5■□□□□ 0.39
CAPNS1-213ENST00000592354 HSPA1AP0DMV8 641 aaKnown RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 141.8 ms