RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 SNED1Q8TER0 1413 aa24.68■■□□□ 1.54
CCDC43-205ENST00000592333 SCN4AP35499 1836 aa24.68■■□□□ 1.54
CCDC43-205ENST00000592333 HOXB7P09629 217 aa24.67■■□□□ 1.54
CCDC43-205ENST00000592333 EIF2S2P20042 333 aaKnown RBP24.67■■□□□ 1.54
CCDC43-205ENST00000592333 GPTP24298 496 aa24.67■■□□□ 1.54
CCDC43-205ENST00000592333 IARSP41252 1262 aaKnown RBP24.67■■□□□ 1.54
CCDC43-205ENST00000592333 CHADLQ6NUI6 762 aa24.67■■□□□ 1.54
CCDC43-205ENST00000592333 FZD9O00144 591 aa24.66■■□□□ 1.54
CCDC43-205ENST00000592333 SYNE4Q8N205 404 aa24.66■■□□□ 1.54
CCDC43-205ENST00000592333 NLRP3Q96P20 1036 aa24.66■■□□□ 1.54
CCDC43-205ENST00000592333 ZNF277Q9NRM2 450 aaPredicted RBP24.66■■□□□ 1.54
CCDC43-205ENST00000592333 UTP14AQ9BVJ6 771 aaKnown RBP24.65■■□□□ 1.54
CCDC43-205ENST00000592333 DDX21Q9NR30 783 aaKnown RBP eCLIP24.65■■□□□ 1.54
CCDC43-205ENST00000592333 HTRA3P83110 453 aa24.64■■□□□ 1.54
CCDC43-205ENST00000592333 JDP2Q8WYK2 163 aa24.64■■□□□ 1.54
CCDC43-205ENST00000592333 VPS33BQ9H267 617 aa24.64■■□□□ 1.54
CCDC43-205ENST00000592333 TRIM35Q9UPQ4 493 aa24.64■■□□□ 1.54
CCDC43-205ENST00000592333 LDHDQ86WU2 507 aa24.63■■□□□ 1.53
CCDC43-205ENST00000592333 ADAMTS8Q9UP79 889 aa24.63■■□□□ 1.53
CCDC43-205ENST00000592333 NEUROD2Q15784 382 aa24.62■■□□□ 1.53
CCDC43-205ENST00000592333 OLFM4Q6UX06 510 aa24.62■■□□□ 1.53
CCDC43-205ENST00000592333 COPS6Q7L5N1 327 aa24.62■■□□□ 1.53
CCDC43-205ENST00000592333 CCDC146Q8IYE0 955 aa24.62■■□□□ 1.53
CCDC43-205ENST00000592333 GPC2Q8N158 579 aa24.62■■□□□ 1.53
CCDC43-205ENST00000592333 TMX4Q9H1E5 349 aaPredicted RBP24.62■■□□□ 1.53
CCDC43-205ENST00000592333 TAF1DQ9H5J8 278 aaPredicted RBP24.62■■□□□ 1.53
CCDC43-205ENST00000592333 PRKRIP1Q9H875 184 aaPredicted RBP24.62■■□□□ 1.53
CCDC43-205ENST00000592333 PROSER3Q2NL68 480 aa24.61■■□□□ 1.53
CCDC43-205ENST00000592333 PNMA8AQ86V59 439 aaPredicted RBP24.61■■□□□ 1.53
CCDC43-205ENST00000592333 CFAP44Q96MT7 982 aa24.61■■□□□ 1.53
CCDC43-205ENST00000592333 TCIRG1Q13488 830 aa24.6■■□□□ 1.53
CCDC43-205ENST00000592333 CREBZFQ9NS37 354 aa24.6■■□□□ 1.53
CCDC43-205ENST00000592333 HACL1Q9UJ83 578 aa24.6■■□□□ 1.53
CCDC43-205ENST00000592333 PPEF1O14829 653 aaPredicted RBP24.59■■□□□ 1.53
CCDC43-205ENST00000592333 PIAS4Q8N2W9 510 aaPredicted RBP24.59■■□□□ 1.53
CCDC43-205ENST00000592333 XAGE3Q8WTP9 111 aa24.59■■□□□ 1.53
CCDC43-205ENST00000592333 ZNF541Q9H0D2 1346 aa24.59■■□□□ 1.53
CCDC43-205ENST00000592333 NLRP10Q86W26 655 aa24.58■■□□□ 1.53
CCDC43-205ENST00000592333 DBF4Q9UBU7 674 aaPredicted RBP24.58■■□□□ 1.53
CCDC43-205ENST00000592333 ANKRD36CQ5JPF3 1778 aa24.57■■□□□ 1.52
CCDC43-205ENST00000592333 BBOX1O75936 387 aa24.57■■□□□ 1.52
CCDC43-205ENST00000592333 ANXA1P04083 346 aa24.57■■□□□ 1.52
CCDC43-205ENST00000592333 EIF6P56537 245 aaKnown RBP24.57■■□□□ 1.52
CCDC43-205ENST00000592333 ATP6V0A2Q9Y487 856 aa24.57■■□□□ 1.52
CCDC43-205ENST00000592333 CALD1Q05682 793 aaKnown RBP24.56■■□□□ 1.52
CCDC43-205ENST00000592333 PLBD2Q8NHP8 589 aa24.56■■□□□ 1.52
CCDC43-205ENST00000592333 PASKQ96RG2 1323 aa24.56■■□□□ 1.52
CCDC43-205ENST00000592333 EPHX2P34913 555 aa24.55■■□□□ 1.52
CCDC43-205ENST00000592333 AIMP1Q12904 312 aaKnown RBP24.55■■□□□ 1.52
CCDC43-205ENST00000592333 HDGFL1Q5TGJ6 251 aa24.55■■□□□ 1.52
CCDC43-205ENST00000592333 SUPT20HQ8NEM7 779 aa24.55■■□□□ 1.52
CCDC43-205ENST00000592333 LAS1LQ9Y4W2 734 aaKnown RBP24.55■■□□□ 1.52
CCDC43-205ENST00000592333 SH3TC1Q8TE82 1336 aa24.55■■□□□ 1.52
CCDC43-205ENST00000592333 POTEIP0CG38 1075 aa24.54■■□□□ 1.52
CCDC43-205ENST00000592333 POTEJP0CG39 1038 aa24.54■■□□□ 1.52
CCDC43-205ENST00000592333 C3orf67Q6ZVT6 689 aa24.54■■□□□ 1.52
CCDC43-205ENST00000592333 TMC4Q7Z404 712 aa24.54■■□□□ 1.52
CCDC43-205ENST00000592333 CHMP4AQ9BY43 222 aa24.54■■□□□ 1.52
CCDC43-205ENST00000592333 HYPKQ9NX55 129 aa24.54■■□□□ 1.52
CCDC43-205ENST00000592333 CHPF2Q9P2E5 772 aa24.54■■□□□ 1.52
CCDC43-205ENST00000592333 TRMT112Q9UI30 125 aaKnown RBP24.54■■□□□ 1.52
CCDC43-205ENST00000592333 ZNF853P0CG23 659 aa24.53■■□□□ 1.52
CCDC43-205ENST00000592333 ANKRD13DQ6ZTN6 518 aa24.53■■□□□ 1.52
CCDC43-205ENST00000592333 SP8Q8IXZ3 490 aa24.53■■□□□ 1.52
CCDC43-205ENST00000592333 LARGE2Q8N3Y3 721 aa24.53■■□□□ 1.52
CCDC43-205ENST00000592333 NECTIN2Q92692 538 aa24.53■■□□□ 1.52
CCDC43-205ENST00000592333 RTFDC1Q9BY42 306 aaPredicted RBP24.53■■□□□ 1.52
CCDC43-205ENST00000592333 KRT24Q2M2I5 525 aa24.52■■□□□ 1.52
CCDC43-205ENST00000592333 ADAMTSL1Q8N6G6 1762 aa24.52■■□□□ 1.52
CCDC43-205ENST00000592333 ITGBL1O95965 494 aaPredicted RBP24.51■■□□□ 1.51
CCDC43-205ENST00000592333 DDX46Q7L014 1031 aaKnown RBP24.51■■□□□ 1.51
CCDC43-205ENST00000592333 IFT57Q9NWB7 429 aa24.51■■□□□ 1.51
CCDC43-205ENST00000592333 ABCC4O15439 1325 aa24.51■■□□□ 1.51
CCDC43-205ENST00000592333 PCNTO95613 3336 aa24.5■■□□□ 1.51
CCDC43-205ENST00000592333 LMOD1P29536 600 aaPredicted RBP24.5■■□□□ 1.51
CCDC43-205ENST00000592333 GNAI1P63096 354 aa24.5■■□□□ 1.51
CCDC43-205ENST00000592333 TRIM28Q13263 835 aaKnown RBP24.5■■□□□ 1.51
CCDC43-205ENST00000592333 DUSP27Q5VZP5 1158 aa24.5■■□□□ 1.51
CCDC43-205ENST00000592333 NIM1KQ8IY84 436 aa24.5■■□□□ 1.51
CCDC43-205ENST00000592333 MBIPQ9NS73 344 aa24.5■■□□□ 1.51
CCDC43-205ENST00000592333 EAPPQ56P03 285 aaPredicted RBP24.49■■□□□ 1.51
CCDC43-205ENST00000592333 ISCA1Q9BUE6 129 aa24.49■■□□□ 1.51
CCDC43-205ENST00000592333 COL4A5P29400 1685 aa24.48■■□□□ 1.51
CCDC43-205ENST00000592333 GRAPQ13588 217 aa24.48■■□□□ 1.51
CCDC43-205ENST00000592333 GRAPLQ8TC17 118 aaPredicted RBP24.48■■□□□ 1.51
CCDC43-205ENST00000592333 TMEM88BA6NKF7 163 aa24.47■■□□□ 1.51
CCDC43-205ENST00000592333 APAF1O14727 1248 aa24.47■■□□□ 1.51
CCDC43-205ENST00000592333 PPIP5K2O43314 1243 aa24.47■■□□□ 1.51
CCDC43-205ENST00000592333 HCLS1P14317 486 aaPredicted RBP24.47■■□□□ 1.51
CCDC43-205ENST00000592333 CLEC11AQ9Y240 323 aa24.47■■□□□ 1.51
CCDC43-205ENST00000592333 SF3B3Q15393 1217 aaKnown RBP24.46■■□□□ 1.51
CCDC43-205ENST00000592333 DPP8Q6V1X1 898 aaPredicted RBP24.46■■□□□ 1.51
CCDC43-205ENST00000592333 CNTROBQ8N137 903 aa24.46■■□□□ 1.51
CCDC43-205ENST00000592333 MPNDQ8N594 471 aa24.46■■□□□ 1.51
CCDC43-205ENST00000592333 ZNRF3Q9ULT6 936 aa24.46■■□□□ 1.51
CCDC43-205ENST00000592333 GJA3Q9Y6H8 435 aa24.46■■□□□ 1.51
CCDC43-205ENST00000592333 LAMB2P55268 1798 aa24.46■■□□□ 1.51
CCDC43-205ENST00000592333 CNTNAP1P78357 1384 aa24.45■■□□□ 1.5
CCDC43-205ENST00000592333 TCERG1O14776 1098 aaKnown RBP24.45■■□□□ 1.5
CCDC43-205ENST00000592333 HSP90B1P14625 803 aaKnown RBP24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 157.6 ms