RNA–Protein interactions for RNA: ENST00000592208.5

RAVER1-204, Transcript of ribonucleoprotein, PTB binding 1, humanhuman

TSL 1 (best)

Gene RAVER1, Length 4,693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAVER1-204ENST00000592208 GOLIM4O00461 696 aa17.02■□□□□ 0.32
RAVER1-204ENST00000592208 HDAC1Q13547 482 aaPredicted RBP17.02■□□□□ 0.32
RAVER1-204ENST00000592208 NIP7Q9Y221 180 aaKnown RBP eCLIP17.02■□□□□ 0.32
RAVER1-204ENST00000592208 KRT24Q2M2I5 525 aa17.02■□□□□ 0.32
RAVER1-204ENST00000592208 CCDC152Q4G0S7 254 aa17.02■□□□□ 0.32
RAVER1-204ENST00000592208 TTLL5Q6EMB2 1281 aa17.02■□□□□ 0.32
RAVER1-204ENST00000592208 CATIPQ7Z7H3 387 aa17.02■□□□□ 0.32
RAVER1-204ENST00000592208 PER1O15534 1290 aaPredicted RBP17.02■□□□□ 0.31
RAVER1-204ENST00000592208 EIF3JO75822 258 aaKnown RBP17.02■□□□□ 0.31
RAVER1-204ENST00000592208 ZRSR2Q15696 482 aaKnown RBP17.02■□□□□ 0.31
RAVER1-204ENST00000592208 DDX17Q92841 729 aaKnown RBP17.02■□□□□ 0.31
RAVER1-204ENST00000592208 CUL5Q93034 780 aa17.02■□□□□ 0.31
RAVER1-204ENST00000592208 EIF5P55010 431 aaKnown RBP17.01■□□□□ 0.31
RAVER1-204ENST00000592208 ST5P78524 1137 aa17.01■□□□□ 0.31
RAVER1-204ENST00000592208 NLRP3Q96P20 1036 aa17.01■□□□□ 0.31
RAVER1-204ENST00000592208 LMBR1LQ6UX01 489 aa17.01■□□□□ 0.31
RAVER1-204ENST00000592208 DDX11Q96FC9 970 aa17.01■□□□□ 0.31
RAVER1-204ENST00000592208 DDX19AQ9NUU7 478 aaKnown RBP17.01■□□□□ 0.31
RAVER1-204ENST00000592208 GRM8O00222 908 aa17.01■□□□□ 0.31
RAVER1-204ENST00000592208 EPB41L2O43491 1005 aaKnown RBP17.01■□□□□ 0.31
RAVER1-204ENST00000592208 CCDC183Q5T5S1 534 aa17.01■□□□□ 0.31
RAVER1-204ENST00000592208 CCDC83Q8IWF9 413 aa17.01■□□□□ 0.31
RAVER1-204ENST00000592208 TSG101Q99816 390 aa17.01■□□□□ 0.31
RAVER1-204ENST00000592208 MAP3K5Q99683 1374 aa17.01■□□□□ 0.31
RAVER1-204ENST00000592208 ZFYVE9O95405 1425 aa17.01■□□□□ 0.31
RAVER1-204ENST00000592208 PDE4BQ07343 736 aa17■□□□□ 0.31
RAVER1-204ENST00000592208 GSTO1P78417 241 aa17■□□□□ 0.31
RAVER1-204ENST00000592208 RANBP6O60518 1105 aaKnown RBP17■□□□□ 0.31
RAVER1-204ENST00000592208 DZIP3Q86Y13 1208 aaKnown RBP17■□□□□ 0.31
RAVER1-204ENST00000592208 TMTC2Q8N394 836 aa17■□□□□ 0.31
RAVER1-204ENST00000592208 PAF1Q8N7H5 531 aa17■□□□□ 0.31
RAVER1-204ENST00000592208 SSRP1Q08945 709 aaKnown RBP16.99■□□□□ 0.31
RAVER1-204ENST00000592208 VSIG10Q8N0Z9 540 aa16.99■□□□□ 0.31
RAVER1-204ENST00000592208 PCDH11XQ9BZA7 1347 aa16.99■□□□□ 0.31
RAVER1-204ENST00000592208 PCDH11YQ9BZA8 1340 aa16.99■□□□□ 0.31
RAVER1-204ENST00000592208 CCDC66A2RUB6 948 aa16.99■□□□□ 0.31
RAVER1-204ENST00000592208 IFIT3O14879 490 aaKnown RBP16.99■□□□□ 0.31
RAVER1-204ENST00000592208 PPP4R3AQ6IN85 833 aa16.99■□□□□ 0.31
RAVER1-204ENST00000592208 VPS36Q86VN1 386 aa16.99■□□□□ 0.31
RAVER1-204ENST00000592208 ZGPATQ8N5A5 531 aaKnown RBP16.99■□□□□ 0.31
RAVER1-204ENST00000592208 TSPYL6Q8N831 410 aa16.99■□□□□ 0.31
RAVER1-204ENST00000592208 SPC24Q8NBT2 197 aa16.99■□□□□ 0.31
RAVER1-204ENST00000592208 RHPN1Q8TCX5 695 aa16.99■□□□□ 0.31
RAVER1-204ENST00000592208 CCDC194A0A1B0GVG4 234 aa16.99■□□□□ 0.31
RAVER1-204ENST00000592208 FKBP15Q5T1M5 1219 aa16.99■□□□□ 0.31
RAVER1-204ENST00000592208 TSHZ3Q63HK5 1081 aa16.99■□□□□ 0.31
RAVER1-204ENST00000592208 CCDC191Q8NCU4 936 aa16.99■□□□□ 0.31
RAVER1-204ENST00000592208 LINS1Q8NG48 757 aa16.99■□□□□ 0.31
RAVER1-204ENST00000592208 RNMTO43148 476 aaKnown RBP16.99■□□□□ 0.31
RAVER1-204ENST00000592208 RTCBQ9Y3I0 505 aaKnown RBP16.99■□□□□ 0.31
RAVER1-204ENST00000592208 MAGI3Q5TCQ9 1506 aa16.99■□□□□ 0.31
RAVER1-204ENST00000592208 ZSCAN12O43309 604 aa16.98■□□□□ 0.31
RAVER1-204ENST00000592208 BMP15O95972 392 aa16.98■□□□□ 0.31
RAVER1-204ENST00000592208 TAF4BQ92750 862 aa16.98■□□□□ 0.31
RAVER1-204ENST00000592208 LRRC27Q9C0I9 530 aa16.98■□□□□ 0.31
RAVER1-204ENST00000592208 TFCP2L1Q9NZI6 479 aa16.98■□□□□ 0.31
RAVER1-204ENST00000592208 NEMFO60524 1076 aa16.98■□□□□ 0.31
RAVER1-204ENST00000592208 KANK3Q6NY19 840 aa16.98■□□□□ 0.31
RAVER1-204ENST00000592208 GBP3Q9H0R5 595 aa16.98■□□□□ 0.31
RAVER1-204ENST00000592208 PDCL2Q8N4E4 241 aa16.98■□□□□ 0.31
RAVER1-204ENST00000592208 MRPL50Q8N5N7 158 aaKnown RBP16.98■□□□□ 0.31
RAVER1-204ENST00000592208 EDC4Q6P2E9 1401 aaKnown RBP16.98■□□□□ 0.31
RAVER1-204ENST00000592208 GOLGA8AA7E2F4 631 aa16.97■□□□□ 0.31
RAVER1-204ENST00000592208 GOLGA8BA8MQT2 603 aa16.97■□□□□ 0.31
RAVER1-204ENST00000592208 AMPD3Q01432 767 aa16.97■□□□□ 0.31
RAVER1-204ENST00000592208 BAG4O95429 457 aaKnown RBP16.97■□□□□ 0.31
RAVER1-204ENST00000592208 CFAP100Q494V2 611 aa16.97■□□□□ 0.31
RAVER1-204ENST00000592208 ARHGAP29Q52LW3 1261 aa16.97■□□□□ 0.31
RAVER1-204ENST00000592208 ANAPC15P60006 121 aa16.97■□□□□ 0.31
RAVER1-204ENST00000592208 JAKMIP3Q5VZ66 844 aa16.97■□□□□ 0.31
RAVER1-204ENST00000592208 VAMP4O75379 141 aa16.97■□□□□ 0.31
RAVER1-204ENST00000592208 SFPQP23246 707 aaKnown RBP eCLIP16.97■□□□□ 0.31
RAVER1-204ENST00000592208 HLA-DOAP06340 250 aa16.96■□□□□ 0.31
RAVER1-204ENST00000592208 NCOA7Q8NI08 942 aa16.96■□□□□ 0.31
RAVER1-204ENST00000592208 PIK3C2GO75747 1445 aa16.96■□□□□ 0.31
RAVER1-204ENST00000592208 SBNO1A3KN83 1393 aa16.96■□□□□ 0.31
RAVER1-204ENST00000592208 CCDC82Q8N4S0 544 aa16.96■□□□□ 0.31
RAVER1-204ENST00000592208 IARSP41252 1262 aaKnown RBP16.96■□□□□ 0.3
RAVER1-204ENST00000592208 ATP2B3Q16720 1220 aa16.96■□□□□ 0.3
RAVER1-204ENST00000592208 IQSEC3Q9UPP2 1182 aaPredicted RBP16.96■□□□□ 0.3
RAVER1-204ENST00000592208 TPTE2Q6XPS3 522 aa16.95■□□□□ 0.3
RAVER1-204ENST00000592208 CDCA7Q9BWT1 371 aaPredicted RBP16.95■□□□□ 0.3
RAVER1-204ENST00000592208 ZSCAN16Q9H4T2 348 aaPredicted RBP16.95■□□□□ 0.3
RAVER1-204ENST00000592208 ZCCHC11Q5TAX3 1644 aaKnown RBP16.95■□□□□ 0.3
RAVER1-204ENST00000592208 ARAP3Q8WWN8 1544 aa16.95■□□□□ 0.3
RAVER1-204ENST00000592208 PLEKHG3A1L390 1219 aa16.95■□□□□ 0.3
RAVER1-204ENST00000592208 AXDND1Q5T1B0 1012 aaPredicted RBP16.95■□□□□ 0.3
RAVER1-204ENST00000592208 LEKR1Q6ZMV7 388 aa16.95■□□□□ 0.3
RAVER1-204ENST00000592208 FERMT3Q86UX7 667 aa16.95■□□□□ 0.3
RAVER1-204ENST00000592208 MBD5Q9P267 1494 aa16.95■□□□□ 0.3
RAVER1-204ENST00000592208 COL17A1Q9UMD9 1497 aaPredicted RBP16.95■□□□□ 0.3
RAVER1-204ENST00000592208 IL15P40933 162 aaPredicted RBP16.95■□□□□ 0.3
RAVER1-204ENST00000592208 TTC22Q5TAA0 569 aa16.95■□□□□ 0.3
RAVER1-204ENST00000592208 STXBP4Q6ZWJ1 553 aa16.95■□□□□ 0.3
RAVER1-204ENST00000592208 UTP14AQ9BVJ6 771 aaKnown RBP16.95■□□□□ 0.3
RAVER1-204ENST00000592208 CABP5Q9NP86 173 aa16.95■□□□□ 0.3
RAVER1-204ENST00000592208 SPA17Q15506 151 aa16.94■□□□□ 0.3
RAVER1-204ENST00000592208 CWF19L2Q2TBE0 894 aaKnown RBP16.94■□□□□ 0.3
RAVER1-204ENST00000592208 CCDC148Q8NFR7 591 aa16.94■□□□□ 0.3
RAVER1-204ENST00000592208 BABAM1Q9NWV8 329 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms