RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 A0A087WZG4 1122 aa19.09■□□□□ 0.65
MBD1-227ENST00000592060 EVA1CP58658 441 aa19.09■□□□□ 0.65
MBD1-227ENST00000592060 PTPN12Q05209 780 aaKnown RBP19.09■□□□□ 0.65
MBD1-227ENST00000592060 PKP1Q13835 747 aa19.09■□□□□ 0.65
MBD1-227ENST00000592060 SNX14Q9Y5W7 946 aa19.09■□□□□ 0.65
MBD1-227ENST00000592060 COL22A1Q8NFW1 1626 aaPredicted RBP19.09■□□□□ 0.65
MBD1-227ENST00000592060 TTLL7Q6ZT98 887 aa19.08■□□□□ 0.65
MBD1-227ENST00000592060 RUFY2Q8WXA3 655 aa19.08■□□□□ 0.65
MBD1-227ENST00000592060 WNK3Q9BYP7 1800 aa19.08■□□□□ 0.64
MBD1-227ENST00000592060 UPF3BQ9BZI7 483 aaKnown RBP19.08■□□□□ 0.64
MBD1-227ENST00000592060 GZF1Q9H116 711 aaPredicted RBP19.08■□□□□ 0.64
MBD1-227ENST00000592060 BRPF3Q9ULD4 1205 aa19.08■□□□□ 0.64
MBD1-227ENST00000592060 ZDHHC9Q9Y397 364 aa19.08■□□□□ 0.64
MBD1-227ENST00000592060 COL16A1Q07092 1604 aaPredicted RBP19.08■□□□□ 0.64
MBD1-227ENST00000592060 DISP2A7MBM2 1401 aa19.07■□□□□ 0.64
MBD1-227ENST00000592060 H7C1W4 665 aa19.07■□□□□ 0.64
MBD1-227ENST00000592060 A1BGP04217 495 aa19.07■□□□□ 0.64
MBD1-227ENST00000592060 SKOR2Q2VWA4 1001 aaPredicted RBP19.07■□□□□ 0.64
MBD1-227ENST00000592060 L1TD1Q5T7N2 865 aaKnown RBP19.07■□□□□ 0.64
MBD1-227ENST00000592060 KIAA1211Q6ZU35 1233 aa19.06■□□□□ 0.64
MBD1-227ENST00000592060 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.06■□□□□ 0.64
MBD1-227ENST00000592060 ROBO1Q9Y6N7 1651 aa19.06■□□□□ 0.64
MBD1-227ENST00000592060 RASEFQ8IZ41 740 aa19.06■□□□□ 0.64
MBD1-227ENST00000592060 INTS4Q96HW7 963 aaKnown RBP19.06■□□□□ 0.64
MBD1-227ENST00000592060 SNRKQ9NRH2 765 aa19.06■□□□□ 0.64
MBD1-227ENST00000592060 AHDC1Q5TGY3 1603 aaPredicted RBP19.06■□□□□ 0.64
MBD1-227ENST00000592060 FOXO4P98177 505 aa19.05■□□□□ 0.64
MBD1-227ENST00000592060 PTH1RQ03431 593 aa19.05■□□□□ 0.64
MBD1-227ENST00000592060 KCNB2Q92953 911 aa19.05■□□□□ 0.64
MBD1-227ENST00000592060 TTC14Q96N46 770 aa19.05■□□□□ 0.64
MBD1-227ENST00000592060 LRP6O75581 1613 aa19.05■□□□□ 0.64
MBD1-227ENST00000592060 GOLGA6L22H0YM25 854 aa19.04■□□□□ 0.64
MBD1-227ENST00000592060 HIP1O00291 1037 aa19.04■□□□□ 0.64
MBD1-227ENST00000592060 CWC25Q9NXE8 425 aaPredicted RBP19.04■□□□□ 0.64
MBD1-227ENST00000592060 TNNI3KQ59H18 835 aa19.04■□□□□ 0.64
MBD1-227ENST00000592060 FPGT-TNNI3KV9GXZ4 949 aa19.04■□□□□ 0.64
MBD1-227ENST00000592060 TFCP2Q12800 502 aa19.03■□□□□ 0.64
MBD1-227ENST00000592060 BOLA2Q9H3K6 86 aa19.03■□□□□ 0.64
MBD1-227ENST00000592060 TMOD3Q9NYL9 352 aa19.03■□□□□ 0.64
MBD1-227ENST00000592060 DBNLQ9UJU6 430 aaKnown RBP19.03■□□□□ 0.64
MBD1-227ENST00000592060 CCDC171Q6TFL3 1326 aa19.03■□□□□ 0.64
MBD1-227ENST00000592060 GOLGA6L3A6NEY3 463 aa19.02■□□□□ 0.64
MBD1-227ENST00000592060 NMIQ13287 307 aaPredicted RBP19.02■□□□□ 0.64
MBD1-227ENST00000592060 LMBR1LQ6UX01 489 aa19.02■□□□□ 0.64
MBD1-227ENST00000592060 NOL8Q76FK4 1167 aaKnown RBP19.02■□□□□ 0.64
MBD1-227ENST00000592060 BTG4Q9NY30 223 aa19.02■□□□□ 0.64
MBD1-227ENST00000592060 CCDC191Q8NCU4 936 aa19.02■□□□□ 0.64
MBD1-227ENST00000592060 FAM227BQ96M60 508 aa19.02■□□□□ 0.64
MBD1-227ENST00000592060 MED23Q9ULK4 1368 aa19.02■□□□□ 0.64
MBD1-227ENST00000592060 JCADQ9P266 1359 aa19.01■□□□□ 0.63
MBD1-227ENST00000592060 ATP5JP18859 108 aa19.01■□□□□ 0.63
MBD1-227ENST00000592060 ZBTB3Q9H5J0 574 aa19.01■□□□□ 0.63
MBD1-227ENST00000592060 RFX7Q2KHR2 1363 aa19■□□□□ 0.63
MBD1-227ENST00000592060 BRD1O95696 1058 aa19■□□□□ 0.63
MBD1-227ENST00000592060 NECTIN1Q15223 517 aa19■□□□□ 0.63
MBD1-227ENST00000592060 MCTP1Q6DN14 999 aa19■□□□□ 0.63
MBD1-227ENST00000592060 PIGBQ92521 554 aa19■□□□□ 0.63
MBD1-227ENST00000592060 A0A0D9SFI3 127 aa18.99■□□□□ 0.63
MBD1-227ENST00000592060 KLHL40Q2TBA0 621 aa18.99■□□□□ 0.63
MBD1-227ENST00000592060 VSIG10Q8N0Z9 540 aa18.99■□□□□ 0.63
MBD1-227ENST00000592060 FSD1Q9BTV5 496 aa18.99■□□□□ 0.63
MBD1-227ENST00000592060 ISCA1Q9BUE6 129 aa18.99■□□□□ 0.63
MBD1-227ENST00000592060 LMBRD1Q9NUN5 540 aa18.99■□□□□ 0.63
MBD1-227ENST00000592060 ISY1Q9ULR0 285 aaKnown RBP18.99■□□□□ 0.63
MBD1-227ENST00000592060 AK2P54819 239 aa18.99■□□□□ 0.63
MBD1-227ENST00000592060 TM6SF1Q9BZW5 370 aa18.99■□□□□ 0.63
MBD1-227ENST00000592060 ASAP1Q9ULH1 1129 aa18.99■□□□□ 0.63
MBD1-227ENST00000592060 LTBP4Q8N2S1 1624 aa18.98■□□□□ 0.63
MBD1-227ENST00000592060 XRCC6P12956 609 aaKnown RBP eCLIP18.98■□□□□ 0.632e-6■■■■■ 29.9
MBD1-227ENST00000592060 PRPF40BQ6NWY9 871 aaKnown RBP18.98■□□□□ 0.63
MBD1-227ENST00000592060 ATG9AQ7Z3C6 839 aa18.98■□□□□ 0.63
MBD1-227ENST00000592060 MAP4K1Q92918 833 aa18.98■□□□□ 0.63
MBD1-227ENST00000592060 ATG3Q9NT62 314 aa18.98■□□□□ 0.63
MBD1-227ENST00000592060 ANKRD36CQ5JPF3 1778 aa18.98■□□□□ 0.63
MBD1-227ENST00000592060 RUFY3Q7L099 469 aa18.97■□□□□ 0.63
MBD1-227ENST00000592060 DBNDD2Q9BQY9 259 aa18.97■□□□□ 0.63
MBD1-227ENST00000592060 RBM8AQ9Y5S9 174 aaKnown RBP18.97■□□□□ 0.63
MBD1-227ENST00000592060 BCL9O00512 1426 aa18.97■□□□□ 0.63
MBD1-227ENST00000592060 CASTP20810 708 aaKnown RBP18.97■□□□□ 0.63
MBD1-227ENST00000592060 ADCK5Q3MIX3 580 aa18.97■□□□□ 0.63
MBD1-227ENST00000592060 DNAJC10Q8IXB1 793 aa18.97■□□□□ 0.63
MBD1-227ENST00000592060 TEX13AQ9BXU3 409 aaPredicted RBP18.97■□□□□ 0.63
MBD1-227ENST00000592060 RPAP1Q9BWH6 1393 aaPredicted RBP18.96■□□□□ 0.63
MBD1-227ENST00000592060 ZNF609O15014 1411 aa18.96■□□□□ 0.63
MBD1-227ENST00000592060 CREB3L3Q68CJ9 461 aa18.96■□□□□ 0.63
MBD1-227ENST00000592060 EDC3Q96F86 508 aaKnown RBP18.96■□□□□ 0.63
MBD1-227ENST00000592060 ZSWIM6Q9HCJ5 1215 aa18.96■□□□□ 0.63
MBD1-227ENST00000592060 GPR108Q9NPR9 543 aa18.96■□□□□ 0.63
MBD1-227ENST00000592060 NRAPQ86VF7 1730 aa18.96■□□□□ 0.63
MBD1-227ENST00000592060 CPA1P15085 419 aa18.95■□□□□ 0.62
MBD1-227ENST00000592060 TCIRG1Q13488 830 aa18.95■□□□□ 0.62
MBD1-227ENST00000592060 JAKMIP1Q96N16 626 aaKnown RBP18.95■□□□□ 0.62
MBD1-227ENST00000592060 LIMCH1Q9UPQ0 1083 aa18.95■□□□□ 0.62
MBD1-227ENST00000592060 CHMP3Q9Y3E7 222 aa18.95■□□□□ 0.62
MBD1-227ENST00000592060 DDX49Q9Y6V7 483 aaKnown RBP18.95■□□□□ 0.62
MBD1-227ENST00000592060 DOT1LQ8TEK3 1739 aa18.95■□□□□ 0.62
MBD1-227ENST00000592060 VPS53Q5VIR6 699 aa18.95■□□□□ 0.62
MBD1-227ENST00000592060 HAUS7Q99871 368 aa18.95■□□□□ 0.62
MBD1-227ENST00000592060 MRE11P49959 708 aa18.94■□□□□ 0.62
MBD1-227ENST00000592060 TRIM28Q13263 835 aaKnown RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms