RNA–Protein interactions for RNA: ENST00000590212.1

SNRPD2-208, Transcript of small nuclear ribonucleoprotein D2 polypeptide, humanhuman

TSL 3 BASIC

Gene SNRPD2, Length 454 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD2-208ENST00000590212 AMER1Q5JTC6 1135 aaPredicted RBP13.09□□□□□ -0.31
SNRPD2-208ENST00000590212 SAPCD2Q86UD0 394 aa13.09□□□□□ -0.31
SNRPD2-208ENST00000590212 LARGE2Q8N3Y3 721 aa13.09□□□□□ -0.31
SNRPD2-208ENST00000590212 HHIPL1Q96JK4 782 aa13.09□□□□□ -0.31
SNRPD2-208ENST00000590212 TNRC18O15417 2968 aaPredicted RBP13.09□□□□□ -0.31
SNRPD2-208ENST00000590212 CEMIPQ8WUJ3 1361 aa13.08□□□□□ -0.31
SNRPD2-208ENST00000590212 CELF2O95319 508 aaKnown RBP13.08□□□□□ -0.32
SNRPD2-208ENST00000590212 HSPA5P11021 654 aaKnown RBP13.08□□□□□ -0.32
SNRPD2-208ENST00000590212 CRY2Q49AN0 593 aa13.08□□□□□ -0.32
SNRPD2-208ENST00000590212 GRIPAP1Q4V328 841 aa13.07□□□□□ -0.32
SNRPD2-208ENST00000590212 ADARB2Q9NS39 739 aaKnown RBP13.07□□□□□ -0.32
SNRPD2-208ENST00000590212 PRAMEF22A3QJZ6 481 aa13.06□□□□□ -0.32
SNRPD2-208ENST00000590212 SNRPA1P09661 255 aaKnown RBP13.06□□□□□ -0.32
SNRPD2-208ENST00000590212 CIAPIN1Q6FI81 312 aa13.06□□□□□ -0.32
SNRPD2-208ENST00000590212 NIM1KQ8IY84 436 aa13.06□□□□□ -0.32
SNRPD2-208ENST00000590212 GPRC5DQ9NZD1 345 aa13.06□□□□□ -0.32
SNRPD2-208ENST00000590212 U2SURPO15042 1029 aaKnown RBP13.05□□□□□ -0.32
SNRPD2-208ENST00000590212 RPGRQ92834 1020 aaKnown RBP13.05□□□□□ -0.32
SNRPD2-208ENST00000590212 NYXQ9GZU5 481 aa13.05□□□□□ -0.32
SNRPD2-208ENST00000590212 ABCC12Q96J65 1359 aa13.05□□□□□ -0.32
SNRPD2-208ENST00000590212 NBPF26B4DH59 902 aa13.04□□□□□ -0.32
SNRPD2-208ENST00000590212 HOXA10P31260 410 aaPredicted RBP13.04□□□□□ -0.32
SNRPD2-208ENST00000590212 HLFQ16534 295 aa13.04□□□□□ -0.32
SNRPD2-208ENST00000590212 NBPF10Q6P3W6 841 aaKnown RBP13.04□□□□□ -0.32
SNRPD2-208ENST00000590212 NBPF15Q8N660 670 aa13.04□□□□□ -0.32
SNRPD2-208ENST00000590212 GLIS2Q9BZE0 524 aaPredicted RBP13.04□□□□□ -0.32
SNRPD2-208ENST00000590212 PPIP5K2O43314 1243 aa13.03□□□□□ -0.32
SNRPD2-208ENST00000590212 NOGQ13253 232 aa13.03□□□□□ -0.32
SNRPD2-208ENST00000590212 NUTM1Q86Y26 1132 aa13.03□□□□□ -0.32
SNRPD2-208ENST00000590212 ZNF408Q9H9D4 720 aa13.03□□□□□ -0.32
SNRPD2-208ENST00000590212 PGAP2Q9UHJ9 254 aa13.03□□□□□ -0.32
SNRPD2-208ENST00000590212 KIF7Q2M1P5 1343 aa13.03□□□□□ -0.32
SNRPD2-208ENST00000590212 RIC1Q4ADV7 1423 aa13.03□□□□□ -0.32
SNRPD2-208ENST00000590212 COL3A1P02461 1466 aaPredicted RBP13.03□□□□□ -0.32
SNRPD2-208ENST00000590212 PPEF1O14829 653 aaPredicted RBP13.02□□□□□ -0.33
SNRPD2-208ENST00000590212 SOX10P56693 466 aa13.02□□□□□ -0.33
SNRPD2-208ENST00000590212 RBM17Q96I25 401 aaKnown RBP13.02□□□□□ -0.33
SNRPD2-208ENST00000590212 CRAMP1Q96RY5 1269 aa13.02□□□□□ -0.33
SNRPD2-208ENST00000590212 VPS33BQ9H267 617 aa13.02□□□□□ -0.33
SNRPD2-208ENST00000590212 NPC1L1Q9UHC9 1359 aa13.02□□□□□ -0.33
SNRPD2-208ENST00000590212 TCERG1O14776 1098 aaKnown RBP13.01□□□□□ -0.33
SNRPD2-208ENST00000590212 GMPSP49915 693 aaPredicted RBP13.01□□□□□ -0.33
SNRPD2-208ENST00000590212 CXCL9Q07325 125 aa13.01□□□□□ -0.33
SNRPD2-208ENST00000590212 AOC3Q16853 763 aa13.01□□□□□ -0.33
SNRPD2-208ENST00000590212 PRPF38BQ5VTL8 546 aaKnown RBP13.01□□□□□ -0.33
SNRPD2-208ENST00000590212 CDC37L1Q7L3B6 337 aa13.01□□□□□ -0.33
SNRPD2-208ENST00000590212 ZC3H15Q8WU90 426 aaKnown RBP13.01□□□□□ -0.33
SNRPD2-208ENST00000590212 ZIC5Q96T25 663 aa13.01□□□□□ -0.33
SNRPD2-208ENST00000590212 ZNRF3Q9ULT6 936 aa13.01□□□□□ -0.33
SNRPD2-208ENST00000590212 CDHR2Q9BYE9 1310 aa13.01□□□□□ -0.33
SNRPD2-208ENST00000590212 NUP98P52948 1817 aa13□□□□□ -0.33
SNRPD2-208ENST00000590212 IBTKQ9P2D0 1353 aaPredicted RBP13□□□□□ -0.33
SNRPD2-208ENST00000590212 CC2D1BQ5T0F9 858 aaKnown RBP13□□□□□ -0.33
SNRPD2-208ENST00000590212 SLC51AQ86UW1 340 aa13□□□□□ -0.33
SNRPD2-208ENST00000590212 PHACTR3Q96KR7 559 aa13□□□□□ -0.33
SNRPD2-208ENST00000590212 TMX4Q9H1E5 349 aaPredicted RBP13□□□□□ -0.33
SNRPD2-208ENST00000590212 ERVV-1B6SEH8 477 aa12.99□□□□□ -0.33
SNRPD2-208ENST00000590212 PRKAR2BP31323 418 aa12.99□□□□□ -0.33
SNRPD2-208ENST00000590212 HIRAP54198 1017 aaPredicted RBP12.99□□□□□ -0.33
SNRPD2-208ENST00000590212 HUNKP57058 714 aa12.99□□□□□ -0.33
SNRPD2-208ENST00000590212 RTF1Q92541 710 aaKnown RBP12.99□□□□□ -0.33
SNRPD2-208ENST00000590212 BCL2L13Q9BXK5 485 aa12.99□□□□□ -0.33
SNRPD2-208ENST00000590212 SAGE1Q9NXZ1 904 aa12.99□□□□□ -0.33
SNRPD2-208ENST00000590212 MCM10Q7L590 875 aa12.98□□□□□ -0.33
SNRPD2-208ENST00000590212 SUPT20HQ8NEM7 779 aa12.98□□□□□ -0.33
SNRPD2-208ENST00000590212 LAMB4A4D0S4 1761 aa12.98□□□□□ -0.33
SNRPD2-208ENST00000590212 MAP3K15Q6ZN16 1313 aa12.97□□□□□ -0.33
SNRPD2-208ENST00000590212 UBN2Q6ZU65 1347 aa12.97□□□□□ -0.33
SNRPD2-208ENST00000590212 PER1O15534 1290 aaPredicted RBP12.97□□□□□ -0.33
SNRPD2-208ENST00000590212 GPTP24298 496 aa12.97□□□□□ -0.33
SNRPD2-208ENST00000590212 TNIP1Q15025 636 aa12.97□□□□□ -0.33
SNRPD2-208ENST00000590212 RGMBQ6NW40 437 aa12.97□□□□□ -0.33
SNRPD2-208ENST00000590212 NGEFQ8N5V2 710 aa12.97□□□□□ -0.33
SNRPD2-208ENST00000590212 TRPM4Q8TD43 1214 aa12.97□□□□□ -0.33
SNRPD2-208ENST00000590212 RTFDC1Q9BY42 306 aaPredicted RBP12.97□□□□□ -0.33
SNRPD2-208ENST00000590212 ATP6V0A2Q9Y487 856 aa12.97□□□□□ -0.33
SNRPD2-208ENST00000590212 FAM155AB1AL88 458 aaPredicted RBP12.96□□□□□ -0.33
SNRPD2-208ENST00000590212 SUSD4Q5VX71 490 aa12.96□□□□□ -0.33
SNRPD2-208ENST00000590212 KIF6Q6ZMV9 814 aa12.96□□□□□ -0.33
SNRPD2-208ENST00000590212 C3orf67Q6ZVT6 689 aa12.96□□□□□ -0.33
SNRPD2-208ENST00000590212 USP48Q86UV5 1035 aa12.96□□□□□ -0.33
SNRPD2-208ENST00000590212 CCDC102AQ96A19 550 aa12.96□□□□□ -0.33
SNRPD2-208ENST00000590212 RSPH6AQ9H0K4 717 aa12.96□□□□□ -0.33
SNRPD2-208ENST00000590212 RAD17O75943 681 aa12.95□□□□□ -0.34
SNRPD2-208ENST00000590212 NTSR2O95665 410 aa12.95□□□□□ -0.34
SNRPD2-208ENST00000590212 KIF23Q02241 960 aaPredicted RBP12.95□□□□□ -0.34
SNRPD2-208ENST00000590212 KIAA2012Q0VF49 1180 aa12.95□□□□□ -0.34
SNRPD2-208ENST00000590212 NLRP3Q96P20 1036 aa12.95□□□□□ -0.34
SNRPD2-208ENST00000590212 RNF186Q9NXI6 227 aa12.95□□□□□ -0.34
SNRPD2-208ENST00000590212 CNOT7Q9UIV1 285 aaKnown RBP12.95□□□□□ -0.34
SNRPD2-208ENST00000590212 AKAP11Q9UKA4 1901 aa12.95□□□□□ -0.34
SNRPD2-208ENST00000590212 CLSPNQ9HAW4 1339 aa12.94□□□□□ -0.34
SNRPD2-208ENST00000590212 H7C1D1 291 aa12.94□□□□□ -0.34
SNRPD2-208ENST00000590212 TRPA1O75762 1119 aa12.94□□□□□ -0.34
SNRPD2-208ENST00000590212 DCTN1Q14203 1278 aa12.94□□□□□ -0.34
SNRPD2-208ENST00000590212 TAF7Q15545 349 aaPredicted RBP12.94□□□□□ -0.34
SNRPD2-208ENST00000590212 DPP8Q6V1X1 898 aaPredicted RBP12.94□□□□□ -0.34
SNRPD2-208ENST00000590212 TTLL7Q6ZT98 887 aa12.94□□□□□ -0.34
SNRPD2-208ENST00000590212 PPP1R42Q7Z4L9 355 aa12.94□□□□□ -0.34
SNRPD2-208ENST00000590212 CTU1Q7Z7A3 348 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms