RNA–Protein interactions for RNA: ENST00000590115.1

LDLRAD4-213, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 4

Gene LDLRAD4, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-213ENST00000590115 MRPL50Q8N5N7 158 aaKnown RBP7.92□□□□□ -1.14
LDLRAD4-213ENST00000590115 SSH1Q8WYL5 1049 aa7.92□□□□□ -1.14
LDLRAD4-213ENST00000590115 AKAP11Q9UKA4 1901 aa7.91□□□□□ -1.14
LDLRAD4-213ENST00000590115 TMEM88BA6NKF7 163 aa7.91□□□□□ -1.14
LDLRAD4-213ENST00000590115 RFC4P35249 363 aa7.91□□□□□ -1.14
LDLRAD4-213ENST00000590115 TWISTNBQ3B726 338 aaPredicted RBP7.91□□□□□ -1.14
LDLRAD4-213ENST00000590115 COL15A1P39059 1388 aa7.91□□□□□ -1.14
LDLRAD4-213ENST00000590115 NUP98P52948 1817 aa7.9□□□□□ -1.14
LDLRAD4-213ENST00000590115 UBN2Q6ZU65 1347 aa7.9□□□□□ -1.14
LDLRAD4-213ENST00000590115 WDR33Q9C0J8 1336 aaKnown RBP7.9□□□□□ -1.14
LDLRAD4-213ENST00000590115 BCAR3O75815 825 aa7.9□□□□□ -1.14
LDLRAD4-213ENST00000590115 NEFMP07197 916 aa7.9□□□□□ -1.14
LDLRAD4-213ENST00000590115 EIF2S2P20042 333 aaKnown RBP7.9□□□□□ -1.14
LDLRAD4-213ENST00000590115 CANXP27824 592 aaKnown RBP7.9□□□□□ -1.14
LDLRAD4-213ENST00000590115 TM4SF1P30408 202 aa7.9□□□□□ -1.14
LDLRAD4-213ENST00000590115 IL6STP40189 918 aaPredicted RBP7.9□□□□□ -1.14
LDLRAD4-213ENST00000590115 RARSP54136 660 aaKnown RBP7.9□□□□□ -1.14
LDLRAD4-213ENST00000590115 SLC51AQ86UW1 340 aa7.9□□□□□ -1.14
LDLRAD4-213ENST00000590115 TTC5Q8N0Z6 440 aa7.9□□□□□ -1.14
LDLRAD4-213ENST00000590115 YTHDC1Q96MU7 727 aaKnown RBP7.9□□□□□ -1.14
LDLRAD4-213ENST00000590115 DDX21Q9NR30 783 aaKnown RBP eCLIP7.9□□□□□ -1.14
LDLRAD4-213ENST00000590115 CUL9Q8IWT3 2517 aa7.9□□□□□ -1.15
LDLRAD4-213ENST00000590115 SZT2Q5T011 3432 aa7.89□□□□□ -1.15
LDLRAD4-213ENST00000590115 MKI67P46013 3256 aaKnown RBP7.89□□□□□ -1.15
LDLRAD4-213ENST00000590115 DDNO94850 711 aaPredicted RBP7.89□□□□□ -1.15
LDLRAD4-213ENST00000590115 HDGFL1Q5TGJ6 251 aa7.89□□□□□ -1.15
LDLRAD4-213ENST00000590115 LDHDQ86WU2 507 aa7.89□□□□□ -1.15
LDLRAD4-213ENST00000590115 XAGE3Q8WTP9 111 aa7.89□□□□□ -1.15
LDLRAD4-213ENST00000590115 BCL2L13Q9BXK5 485 aa7.89□□□□□ -1.15
LDLRAD4-213ENST00000590115 MCOLN1Q9GZU1 580 aa7.89□□□□□ -1.15
LDLRAD4-213ENST00000590115 TBC1D2BQ9UPU7 963 aa7.89□□□□□ -1.15
LDLRAD4-213ENST00000590115 POLR2AP24928 1970 aaKnown RBP7.89□□□□□ -1.15
LDLRAD4-213ENST00000590115 ERBB4Q15303 1308 aa7.88□□□□□ -1.15
LDLRAD4-213ENST00000590115 IGKV5-2P06315 115 aa7.88□□□□□ -1.15
LDLRAD4-213ENST00000590115 MYL6BP14649 208 aa7.88□□□□□ -1.15
LDLRAD4-213ENST00000590115 BRPF1P55201 1214 aaPredicted RBP7.88□□□□□ -1.15
LDLRAD4-213ENST00000590115 MAP2K1Q02750 393 aaPredicted RBP7.88□□□□□ -1.15
LDLRAD4-213ENST00000590115 CALD1Q05682 793 aaKnown RBP7.88□□□□□ -1.15
LDLRAD4-213ENST00000590115 USPL1Q5W0Q7 1092 aa7.88□□□□□ -1.15
LDLRAD4-213ENST00000590115 DPY19L2Q6NUT2 758 aa7.88□□□□□ -1.15
LDLRAD4-213ENST00000590115 COPS6Q7L5N1 327 aa7.88□□□□□ -1.15
LDLRAD4-213ENST00000590115 SYNE4Q8N205 404 aa7.88□□□□□ -1.15
LDLRAD4-213ENST00000590115 TTLL6Q8N841 843 aa7.88□□□□□ -1.15
LDLRAD4-213ENST00000590115 L3MBTL3Q96JM7 780 aaPredicted RBP7.88□□□□□ -1.15
LDLRAD4-213ENST00000590115 TAF1DQ9H5J8 278 aaPredicted RBP7.88□□□□□ -1.15
LDLRAD4-213ENST00000590115 NARFQ9UHQ1 456 aa7.88□□□□□ -1.15
LDLRAD4-213ENST00000590115 TSKSQ9UJT2 592 aa7.88□□□□□ -1.15
LDLRAD4-213ENST00000590115 ANKRD36CQ5JPF3 1778 aa7.88□□□□□ -1.15
LDLRAD4-213ENST00000590115 CEP290O15078 2479 aa7.88□□□□□ -1.15
LDLRAD4-213ENST00000590115 RNF123Q5XPI4 1314 aa7.87□□□□□ -1.15
LDLRAD4-213ENST00000590115 LTBP3Q9NS15 1303 aa7.87□□□□□ -1.15
LDLRAD4-213ENST00000590115 RLBP1P12271 317 aa7.87□□□□□ -1.15
LDLRAD4-213ENST00000590115 CASP7P55210 303 aa7.87□□□□□ -1.15
LDLRAD4-213ENST00000590115 DEFB115Q30KQ5 88 aa7.87□□□□□ -1.15
LDLRAD4-213ENST00000590115 ERFEQ4G0M1 354 aa7.87□□□□□ -1.15
LDLRAD4-213ENST00000590115 TBC1D9BQ66K14 1250 aa7.87□□□□□ -1.15
LDLRAD4-213ENST00000590115 C3orf67Q6ZVT6 689 aa7.87□□□□□ -1.15
LDLRAD4-213ENST00000590115 ZNF34Q8IZ26 560 aa7.87□□□□□ -1.15
LDLRAD4-213ENST00000590115 ZNF428Q96B54 188 aa7.87□□□□□ -1.15
LDLRAD4-213ENST00000590115 ISCA1Q9BUE6 129 aa7.87□□□□□ -1.15
LDLRAD4-213ENST00000590115 TEX13AQ9BXU3 409 aaPredicted RBP7.87□□□□□ -1.15
LDLRAD4-213ENST00000590115 MYH16Q9H6N6 1097 aa7.87□□□□□ -1.15
LDLRAD4-213ENST00000590115 ABCC12Q96J65 1359 aa7.86□□□□□ -1.15
LDLRAD4-213ENST00000590115 MAP3K15Q6ZN16 1313 aa7.86□□□□□ -1.15
LDLRAD4-213ENST00000590115 F6X3S4 739 aa7.86□□□□□ -1.15
LDLRAD4-213ENST00000590115 STARD3NLO95772 234 aa7.86□□□□□ -1.15
LDLRAD4-213ENST00000590115 SLC4A2P04920 1241 aa7.86□□□□□ -1.15
LDLRAD4-213ENST00000590115 NFIXQ14938 502 aa7.86□□□□□ -1.15
LDLRAD4-213ENST00000590115 DDX60Q8IY21 1712 aaKnown RBP7.86□□□□□ -1.15
LDLRAD4-213ENST00000590115 CACNA1FO60840 1977 aa7.86□□□□□ -1.15
LDLRAD4-213ENST00000590115 COL4A5P29400 1685 aa7.86□□□□□ -1.15
LDLRAD4-213ENST00000590115 TRIOBPQ9H2D6 2365 aa7.85□□□□□ -1.15
LDLRAD4-213ENST00000590115 ZNF541Q9H0D2 1346 aa7.85□□□□□ -1.15
LDLRAD4-213ENST00000590115 FLIIQ13045 1269 aa7.85□□□□□ -1.15
LDLRAD4-213ENST00000590115 C20orf194Q5TEA3 1177 aa7.85□□□□□ -1.15
LDLRAD4-213ENST00000590115 PRPF38BQ5VTL8 546 aaKnown RBP7.85□□□□□ -1.15
LDLRAD4-213ENST00000590115 DZIP3Q86Y13 1208 aaKnown RBP7.85□□□□□ -1.15
LDLRAD4-213ENST00000590115 C2CD5Q86YS7 1000 aa7.85□□□□□ -1.15
LDLRAD4-213ENST00000590115 KAZALD1Q96I82 304 aa7.85□□□□□ -1.15
LDLRAD4-213ENST00000590115 ZBTB3Q9H5J0 574 aa7.85□□□□□ -1.15
LDLRAD4-213ENST00000590115 DBF4Q9UBU7 674 aaPredicted RBP7.85□□□□□ -1.15
LDLRAD4-213ENST00000590115 LAMB2P55268 1798 aa7.84□□□□□ -1.15
LDLRAD4-213ENST00000590115 PI4KAP2A4QPH2 592 aa7.84□□□□□ -1.15
LDLRAD4-213ENST00000590115 IQCA1LA6NCM1 817 aa7.84□□□□□ -1.15
LDLRAD4-213ENST00000590115 C21orf2O43822 256 aa7.84□□□□□ -1.15
LDLRAD4-213ENST00000590115 NTSR2O95665 410 aa7.84□□□□□ -1.15
LDLRAD4-213ENST00000590115 FMR1Q06787 632 aaKnown RBP eCLIP7.84□□□□□ -1.15
LDLRAD4-213ENST00000590115 AIMP1Q12904 312 aaKnown RBP7.84□□□□□ -1.15
LDLRAD4-213ENST00000590115 ALDH1L2Q3SY69 923 aa7.84□□□□□ -1.15
LDLRAD4-213ENST00000590115 BEND3Q5T5X7 828 aa7.84□□□□□ -1.15
LDLRAD4-213ENST00000590115 SUSD4Q5VX71 490 aa7.84□□□□□ -1.15
LDLRAD4-213ENST00000590115 MAP1SQ66K74 1059 aaPredicted RBP7.84□□□□□ -1.15
LDLRAD4-213ENST00000590115 CYP4F22Q6NT55 531 aa7.84□□□□□ -1.15
LDLRAD4-213ENST00000590115 GIGYF2Q6Y7W6 1299 aaKnown RBP7.84□□□□□ -1.15
LDLRAD4-213ENST00000590115 CCDC24Q8N4L8 307 aa7.84□□□□□ -1.15
LDLRAD4-213ENST00000590115 PI4KAP1Q8N8J0 262 aa7.84□□□□□ -1.15
LDLRAD4-213ENST00000590115 CAPNS2Q96L46 248 aa7.84□□□□□ -1.15
LDLRAD4-213ENST00000590115 NOB1Q9ULX3 412 aaKnown RBP7.84□□□□□ -1.15
LDLRAD4-213ENST00000590115 KIAA0100Q14667 2235 aaKnown RBP7.84□□□□□ -1.15
LDLRAD4-213ENST00000590115 BRCA2P51587 3418 aa7.84□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms