RNA–Protein interactions for RNA: ENST00000589828.1

VAT1-207, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-207ENST00000589828 ZIC5Q96T25 663 aa10.79□□□□□ -0.68
VAT1-207ENST00000589828 KNSTRNQ9Y448 316 aa10.79□□□□□ -0.68
VAT1-207ENST00000589828 UBR2Q8IWV8 1755 aa10.79□□□□□ -0.68
VAT1-207ENST00000589828 GNAT3A8MTJ3 354 aa10.78□□□□□ -0.68
VAT1-207ENST00000589828 NBPF26B4DH59 902 aa10.78□□□□□ -0.68
VAT1-207ENST00000589828 DIAPH1O60610 1272 aaKnown RBP10.78□□□□□ -0.68
VAT1-207ENST00000589828 LMOD1P29536 600 aaPredicted RBP10.78□□□□□ -0.68
VAT1-207ENST00000589828 EIF6P56537 245 aaKnown RBP10.78□□□□□ -0.68
VAT1-207ENST00000589828 DGKZQ13574 1117 aa10.78□□□□□ -0.68
VAT1-207ENST00000589828 HLFQ16534 295 aa10.78□□□□□ -0.68
VAT1-207ENST00000589828 NBPF10Q6P3W6 841 aaKnown RBP10.78□□□□□ -0.68
VAT1-207ENST00000589828 TPTE2Q6XPS3 522 aa10.78□□□□□ -0.68
VAT1-207ENST00000589828 USP50Q70EL3 339 aaPredicted RBP10.78□□□□□ -0.68
VAT1-207ENST00000589828 NPM2Q86SE8 214 aaKnown RBP10.78□□□□□ -0.68
VAT1-207ENST00000589828 SAPCD2Q86UD0 394 aa10.78□□□□□ -0.68
VAT1-207ENST00000589828 NBPF15Q8N660 670 aa10.78□□□□□ -0.68
VAT1-207ENST00000589828 JDP2Q8WYK2 163 aa10.78□□□□□ -0.68
VAT1-207ENST00000589828 NIP7Q9Y221 180 aaKnown RBP eCLIP10.78□□□□□ -0.68
VAT1-207ENST00000589828 CELF2O95319 508 aaKnown RBP10.77□□□□□ -0.69
VAT1-207ENST00000589828 ALDH1B1P30837 517 aa10.77□□□□□ -0.69
VAT1-207ENST00000589828 CRY2Q49AN0 593 aa10.77□□□□□ -0.69
VAT1-207ENST00000589828 CEMIPQ8WUJ3 1361 aa10.77□□□□□ -0.69
VAT1-207ENST00000589828 ABCC12Q96J65 1359 aa10.77□□□□□ -0.69
VAT1-207ENST00000589828 ARFGEF2Q9Y6D5 1785 aa10.76□□□□□ -0.69
VAT1-207ENST00000589828 BTBD11A6QL63 1104 aa10.76□□□□□ -0.69
VAT1-207ENST00000589828 CIAPIN1Q6FI81 312 aa10.76□□□□□ -0.69
VAT1-207ENST00000589828 NUTM1Q86Y26 1132 aa10.76□□□□□ -0.69
VAT1-207ENST00000589828 LARGE2Q8N3Y3 721 aa10.76□□□□□ -0.69
VAT1-207ENST00000589828 GLIS2Q9BZE0 524 aaPredicted RBP10.76□□□□□ -0.69
VAT1-207ENST00000589828 ZNF652Q9Y2D9 606 aa10.76□□□□□ -0.69
VAT1-207ENST00000589828 CACNA1SQ13698 1873 aa10.75□□□□□ -0.69
VAT1-207ENST00000589828 CA12O43570 354 aa10.75□□□□□ -0.69
VAT1-207ENST00000589828 BRPF1P55201 1214 aaPredicted RBP10.75□□□□□ -0.69
VAT1-207ENST00000589828 GAS2L2Q8NHY3 880 aa10.75□□□□□ -0.69
VAT1-207ENST00000589828 PHACTR3Q96KR7 559 aa10.75□□□□□ -0.69
VAT1-207ENST00000589828 TCERG1O14776 1098 aaKnown RBP10.74□□□□□ -0.69
VAT1-207ENST00000589828 HOXA10P31260 410 aaPredicted RBP10.74□□□□□ -0.69
VAT1-207ENST00000589828 HIRAP54198 1017 aaPredicted RBP10.74□□□□□ -0.69
VAT1-207ENST00000589828 SOX10P56693 466 aa10.74□□□□□ -0.69
VAT1-207ENST00000589828 EIF4G2P78344 907 aaKnown RBP eCLIP10.74□□□□□ -0.69
VAT1-207ENST00000589828 CC2D2BQ6DHV5 1058 aa10.74□□□□□ -0.69
VAT1-207ENST00000589828 DLK2Q6UY11 383 aa10.74□□□□□ -0.69
VAT1-207ENST00000589828 C3orf67Q6ZVT6 689 aa10.74□□□□□ -0.69
VAT1-207ENST00000589828 HHIPL1Q96JK4 782 aa10.74□□□□□ -0.69
VAT1-207ENST00000589828 ADARB2Q9NS39 739 aaKnown RBP10.74□□□□□ -0.69
VAT1-207ENST00000589828 GPRC5DQ9NZD1 345 aa10.74□□□□□ -0.69
VAT1-207ENST00000589828 BCORQ6W2J9 1755 aa10.73□□□□□ -0.69
VAT1-207ENST00000589828 U2SURPO15042 1029 aaKnown RBP10.73□□□□□ -0.69
VAT1-207ENST00000589828 RGL2O15211 777 aa10.73□□□□□ -0.69
VAT1-207ENST00000589828 SNRPA1P09661 255 aaKnown RBP10.73□□□□□ -0.69
VAT1-207ENST00000589828 GTF2E1P29083 439 aaPredicted RBP10.73□□□□□ -0.69
VAT1-207ENST00000589828 CXCL9Q07325 125 aa10.73□□□□□ -0.69
VAT1-207ENST00000589828 AOC3Q16853 763 aa10.73□□□□□ -0.69
VAT1-207ENST00000589828 NIM1KQ8IY84 436 aa10.73□□□□□ -0.69
VAT1-207ENST00000589828 PGAP2Q9UHJ9 254 aa10.73□□□□□ -0.69
VAT1-207ENST00000589828 SHTN1A0MZ66 631 aa10.72□□□□□ -0.69
VAT1-207ENST00000589828 PER1O15534 1290 aaPredicted RBP10.72□□□□□ -0.69
VAT1-207ENST00000589828 GMPSP49915 693 aaPredicted RBP10.72□□□□□ -0.69
VAT1-207ENST00000589828 TRPM4Q8TD43 1214 aa10.72□□□□□ -0.69
VAT1-207ENST00000589828 ZNF408Q9H9D4 720 aa10.72□□□□□ -0.69
VAT1-207ENST00000589828 TIMELESSQ9UNS1 1208 aa10.72□□□□□ -0.69
VAT1-207ENST00000589828 NPC1L1Q9UHC9 1359 aa10.72□□□□□ -0.69
VAT1-207ENST00000589828 COL3A1P02461 1466 aaPredicted RBP10.72□□□□□ -0.69
VAT1-207ENST00000589828 PPEF1O14829 653 aaPredicted RBP10.71□□□□□ -0.69
VAT1-207ENST00000589828 PPIP5K2O43314 1243 aa10.71□□□□□ -0.69
VAT1-207ENST00000589828 CC2D1BQ5T0F9 858 aaKnown RBP10.71□□□□□ -0.69
VAT1-207ENST00000589828 UBN2Q6ZU65 1347 aa10.71□□□□□ -0.69
VAT1-207ENST00000589828 MCM10Q7L590 875 aa10.71□□□□□ -0.69
VAT1-207ENST00000589828 CRAMP1Q96RY5 1269 aa10.71□□□□□ -0.69
VAT1-207ENST00000589828 RIC1Q4ADV7 1423 aa10.7□□□□□ -0.7
VAT1-207ENST00000589828 KIF7Q2M1P5 1343 aa10.7□□□□□ -0.7
VAT1-207ENST00000589828 FAM155AB1AL88 458 aaPredicted RBP10.7□□□□□ -0.7
VAT1-207ENST00000589828 NOGQ13253 232 aa10.7□□□□□ -0.7
VAT1-207ENST00000589828 DCTN1Q14203 1278 aa10.7□□□□□ -0.7
VAT1-207ENST00000589828 SUSD4Q5VX71 490 aa10.7□□□□□ -0.7
VAT1-207ENST00000589828 TTLL7Q6ZT98 887 aa10.7□□□□□ -0.7
VAT1-207ENST00000589828 NGEFQ8N5V2 710 aa10.7□□□□□ -0.7
VAT1-207ENST00000589828 RPGRQ92834 1020 aaKnown RBP10.7□□□□□ -0.7
VAT1-207ENST00000589828 RAD17O75943 681 aa10.69□□□□□ -0.7
VAT1-207ENST00000589828 GPTP24298 496 aa10.69□□□□□ -0.7
VAT1-207ENST00000589828 PRKAR2BP31323 418 aa10.69□□□□□ -0.7
VAT1-207ENST00000589828 HUNKP57058 714 aa10.69□□□□□ -0.7
VAT1-207ENST00000589828 GRIPAP1Q4V328 841 aa10.69□□□□□ -0.7
VAT1-207ENST00000589828 PRPF38BQ5VTL8 546 aaKnown RBP10.69□□□□□ -0.7
VAT1-207ENST00000589828 USP48Q86UV5 1035 aa10.69□□□□□ -0.7
VAT1-207ENST00000589828 RBM17Q96I25 401 aaKnown RBP10.69□□□□□ -0.7
VAT1-207ENST00000589828 NYXQ9GZU5 481 aa10.69□□□□□ -0.7
VAT1-207ENST00000589828 RSPH6AQ9H0K4 717 aa10.69□□□□□ -0.7
VAT1-207ENST00000589828 ZNRF3Q9ULT6 936 aa10.69□□□□□ -0.7
VAT1-207ENST00000589828 SIPA1L3O60292 1781 aaPredicted RBP10.69□□□□□ -0.7
VAT1-207ENST00000589828 CASP8AP2Q9UKL3 1982 aa10.68□□□□□ -0.7
VAT1-207ENST00000589828 ERVV-1B6SEH8 477 aa10.68□□□□□ -0.7
VAT1-207ENST00000589828 NTSR2O95665 410 aa10.68□□□□□ -0.7
VAT1-207ENST00000589828 CDC37L1Q7L3B6 337 aa10.68□□□□□ -0.7
VAT1-207ENST00000589828 ZC3H15Q8WU90 426 aaKnown RBP10.68□□□□□ -0.7
VAT1-207ENST00000589828 RTFDC1Q9BY42 306 aaPredicted RBP10.68□□□□□ -0.7
VAT1-207ENST00000589828 MIS18AQ9NYP9 233 aa10.68□□□□□ -0.7
VAT1-207ENST00000589828 MAP3K15Q6ZN16 1313 aa10.67□□□□□ -0.7
VAT1-207ENST00000589828 SPDYE4A6NLX3 237 aa10.67□□□□□ -0.7
VAT1-207ENST00000589828 YDJCA8MPS7 323 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms