RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 LAMC1P11047 1609 aa8.24□□□□□ -1.09
DNMT1-220ENST00000589351 ATRNO75882 1429 aa8.23□□□□□ -1.09
DNMT1-220ENST00000589351 PRAG1Q86YV5 1406 aa8.23□□□□□ -1.09
DNMT1-220ENST00000589351 KRT28Q7Z3Y7 464 aa8.23□□□□□ -1.09
DNMT1-220ENST00000589351 UNC5CLQ8IV45 518 aa8.23□□□□□ -1.09
DNMT1-220ENST00000589351 ANKRD30BQ9BXX2 1392 aa8.22□□□□□ -1.09
DNMT1-220ENST00000589351 CCDC144AA2RUR9 1427 aa8.22□□□□□ -1.09
DNMT1-220ENST00000589351 RRBP1Q9P2E9 1410 aaKnown RBP8.22□□□□□ -1.09
DNMT1-220ENST00000589351 SENP3-EIF4A1A0A087X0R7 540 aa8.22□□□□□ -1.09
DNMT1-220ENST00000589351 ZMYND10O75800 440 aa8.22□□□□□ -1.09
DNMT1-220ENST00000589351 XPCQ01831 940 aaPredicted RBP8.22□□□□□ -1.09
DNMT1-220ENST00000589351 WAPLQ7Z5K2 1190 aa8.22□□□□□ -1.09
DNMT1-220ENST00000589351 PARP9Q8IXQ6 854 aa8.22□□□□□ -1.09
DNMT1-220ENST00000589351 INSM2Q96T92 566 aaPredicted RBP8.22□□□□□ -1.09
DNMT1-220ENST00000589351 LIMD1Q9UGP4 676 aa8.22□□□□□ -1.09
DNMT1-220ENST00000589351 COL22A1Q8NFW1 1626 aaPredicted RBP8.21□□□□□ -1.09
DNMT1-220ENST00000589351 RELBQ01201 579 aa8.21□□□□□ -1.1
DNMT1-220ENST00000589351 SIRT1Q96EB6 747 aa8.21□□□□□ -1.1
DNMT1-220ENST00000589351 CCDC9Q9Y3X0 531 aaKnown RBP8.21□□□□□ -1.1
DNMT1-220ENST00000589351 SPATA31A3Q5VYP0 1347 aa8.21□□□□□ -1.1
DNMT1-220ENST00000589351 ABCC11Q96J66 1382 aa8.21□□□□□ -1.1
DNMT1-220ENST00000589351 MYOM2P54296 1465 aa8.2□□□□□ -1.1
DNMT1-220ENST00000589351 BCL9LQ86UU0 1499 aa8.2□□□□□ -1.1
DNMT1-220ENST00000589351 CDC42BPGQ6DT37 1551 aa8.2□□□□□ -1.1
DNMT1-220ENST00000589351 ADAM23O75077 832 aa8.2□□□□□ -1.1
DNMT1-220ENST00000589351 CELA2BP08218 269 aaPredicted RBP8.2□□□□□ -1.1
DNMT1-220ENST00000589351 TMEM132EQ6IEE7 984 aa8.2□□□□□ -1.1
DNMT1-220ENST00000589351 ADGRF5Q8IZF2 1346 aa8.2□□□□□ -1.1
DNMT1-220ENST00000589351 PPLO60437 1756 aa8.2□□□□□ -1.1
DNMT1-220ENST00000589351 PXDNQ92626 1479 aa8.19□□□□□ -1.1
DNMT1-220ENST00000589351 LILRB3O75022 631 aa8.19□□□□□ -1.1
DNMT1-220ENST00000589351 MAP3K10Q02779 954 aa8.19□□□□□ -1.1
DNMT1-220ENST00000589351 SRSF11Q05519 484 aaKnown RBP8.19□□□□□ -1.1
DNMT1-220ENST00000589351 GAS6Q14393 721 aa8.19□□□□□ -1.1
DNMT1-220ENST00000589351 PLA2G4EQ3MJ16 856 aa8.19□□□□□ -1.1
DNMT1-220ENST00000589351 RNF217Q8TC41 542 aa8.19□□□□□ -1.1
DNMT1-220ENST00000589351 KCTD15Q96SI1 283 aaPredicted RBP8.19□□□□□ -1.1
DNMT1-220ENST00000589351 MPHOSPH9Q99550 1183 aa8.19□□□□□ -1.1
DNMT1-220ENST00000589351 DHX57Q6P158 1386 aaKnown RBP8.19□□□□□ -1.1
DNMT1-220ENST00000589351 BLMP54132 1417 aaPredicted RBP8.19□□□□□ -1.1
DNMT1-220ENST00000589351 MARF1Q9Y4F3 1742 aaKnown RBP8.18□□□□□ -1.1
DNMT1-220ENST00000589351 MSTNO14793 375 aa8.18□□□□□ -1.1
DNMT1-220ENST00000589351 VPS72Q15906 364 aa8.18□□□□□ -1.1
DNMT1-220ENST00000589351 RTL5Q5HYW3 569 aaPredicted RBP8.18□□□□□ -1.1
DNMT1-220ENST00000589351 SEPT12Q8IYM1 358 aa8.18□□□□□ -1.1
DNMT1-220ENST00000589351 GPKOWQ92917 476 aaPredicted RBP eCLIP8.18□□□□□ -1.1
DNMT1-220ENST00000589351 ZNF395Q9H8N7 513 aaPredicted RBP8.18□□□□□ -1.1
DNMT1-220ENST00000589351 POLMQ9NP87 494 aaPredicted RBP8.18□□□□□ -1.1
DNMT1-220ENST00000589351 CUEDC1Q9NWM3 386 aaPredicted RBP8.18□□□□□ -1.1
DNMT1-220ENST00000589351 POGKQ9P215 609 aa8.18□□□□□ -1.1
DNMT1-220ENST00000589351 TECPR2O15040 1411 aa8.18□□□□□ -1.1
DNMT1-220ENST00000589351 ITGB2P05107 769 aa8.17□□□□□ -1.1
DNMT1-220ENST00000589351 BAG6P46379 1132 aa8.17□□□□□ -1.1
DNMT1-220ENST00000589351 MYSM1Q5VVJ2 828 aa8.17□□□□□ -1.1
DNMT1-220ENST00000589351 KRT27Q7Z3Y8 459 aa8.17□□□□□ -1.1
DNMT1-220ENST00000589351 HELBQ8NG08 1087 aaPredicted RBP8.17□□□□□ -1.1
DNMT1-220ENST00000589351 SPOCK3Q9BQ16 436 aa8.17□□□□□ -1.1
DNMT1-220ENST00000589351 C14orf93Q9H972 538 aaKnown RBP8.17□□□□□ -1.1
DNMT1-220ENST00000589351 CNTNAP5Q8WYK1 1306 aa8.17□□□□□ -1.1
DNMT1-220ENST00000589351 YTHDC2Q9H6S0 1430 aaKnown RBP8.17□□□□□ -1.1
DNMT1-220ENST00000589351 KIF1AQ12756 1690 aa8.17□□□□□ -1.1
DNMT1-220ENST00000589351 ARHGEF10O15013 1369 aa8.16□□□□□ -1.1
DNMT1-220ENST00000589351 SLIT2O94813 1529 aa8.16□□□□□ -1.1
DNMT1-220ENST00000589351 DHX9Q08211 1270 aaKnown RBP8.16□□□□□ -1.1
DNMT1-220ENST00000589351 TUSC1Q2TAM9 212 aa8.16□□□□□ -1.1
DNMT1-220ENST00000589351 RALGAPBQ86X10 1494 aa8.16□□□□□ -1.1
DNMT1-220ENST00000589351 DCAF5Q96JK2 942 aa8.16□□□□□ -1.1
DNMT1-220ENST00000589351 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.16□□□□□ -1.1
DNMT1-220ENST00000589351 SBNO1A3KN83 1393 aa8.15□□□□□ -1.1
DNMT1-220ENST00000589351 INTS6LQ5JSJ4 861 aaKnown RBP8.15□□□□□ -1.1
DNMT1-220ENST00000589351 SLC10A4Q96EP9 437 aa8.15□□□□□ -1.1
DNMT1-220ENST00000589351 ARHGAP9Q9BRR9 750 aa8.15□□□□□ -1.1
DNMT1-220ENST00000589351 TNS3Q68CZ2 1445 aa8.14□□□□□ -1.11
DNMT1-220ENST00000589351 SPATA31E1Q6ZUB1 1445 aa8.14□□□□□ -1.11
DNMT1-220ENST00000589351 GPRASP1Q5JY77 1395 aa8.14□□□□□ -1.11
DNMT1-220ENST00000589351 PLEKHH1Q9ULM0 1364 aa8.14□□□□□ -1.11
DNMT1-220ENST00000589351 TRIM66O15016 1216 aa8.14□□□□□ -1.11
DNMT1-220ENST00000589351 SAFB2Q14151 953 aaKnown RBP eCLIP8.14□□□□□ -1.11
DNMT1-220ENST00000589351 FOXD4L5Q5VV16 416 aaPredicted RBP8.14□□□□□ -1.11
DNMT1-220ENST00000589351 PDXDC2PQ6P474 469 aa8.14□□□□□ -1.11
DNMT1-220ENST00000589351 DEFB132Q7Z7B7 95 aa8.14□□□□□ -1.11
DNMT1-220ENST00000589351 PMFBP1Q8TBY8 1022 aa8.14□□□□□ -1.11
DNMT1-220ENST00000589351 ZC3H15Q8WU90 426 aaKnown RBP8.14□□□□□ -1.11
DNMT1-220ENST00000589351 PRAM1Q96QH2 718 aa8.14□□□□□ -1.11
DNMT1-220ENST00000589351 ENAMQ9NRM1 1142 aa8.14□□□□□ -1.11
DNMT1-220ENST00000589351 CDV3Q9UKY7 258 aaKnown RBP8.14□□□□□ -1.11
DNMT1-220ENST00000589351 KNDC1Q76NI1 1749 aa8.14□□□□□ -1.11
DNMT1-220ENST00000589351 FMN2Q9NZ56 1722 aa8.14□□□□□ -1.11
DNMT1-220ENST00000589351 PIK3C2GO75747 1445 aa8.13□□□□□ -1.11
DNMT1-220ENST00000589351 EIF3AQ14152 1382 aaKnown RBP8.13□□□□□ -1.11
DNMT1-220ENST00000589351 CFAP70Q5T0N1 1121 aa8.13□□□□□ -1.11
DNMT1-220ENST00000589351 BTG4Q9NY30 223 aa8.13□□□□□ -1.11
DNMT1-220ENST00000589351 USP32Q8NFA0 1604 aa8.13□□□□□ -1.11
DNMT1-220ENST00000589351 FAM83GA6ND36 823 aa8.12□□□□□ -1.11
DNMT1-220ENST00000589351 PHF20L1A8MW92 1017 aa8.12□□□□□ -1.11
DNMT1-220ENST00000589351 PROCP04070 461 aa8.12□□□□□ -1.11
DNMT1-220ENST00000589351 NGDNQ8NEJ9 315 aaKnown RBP8.12□□□□□ -1.11
DNMT1-220ENST00000589351 TMPRSS4Q9NRS4 437 aa8.12□□□□□ -1.11
DNMT1-220ENST00000589351 GLI3P10071 1580 aa8.12□□□□□ -1.11
DNMT1-220ENST00000589351 NWD2Q9ULI1 1742 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms