RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 ZKSCAN2Q63HK3 967 aa24.82■■□□□ 1.56
CIRBP-220ENST00000588917 CNBD1Q8NA66 436 aa24.82■■□□□ 1.56
CIRBP-220ENST00000588917 NUP98P52948 1817 aa24.82■■□□□ 1.56
CIRBP-220ENST00000588917 F6X3S4 739 aa24.81■■□□□ 1.56
CIRBP-220ENST00000588917 ST5P78524 1137 aa24.81■■□□□ 1.56
CIRBP-220ENST00000588917 SUSD4Q5VX71 490 aa24.81■■□□□ 1.56
CIRBP-220ENST00000588917 SLC4A10Q6U841 1118 aa24.81■■□□□ 1.56
CIRBP-220ENST00000588917 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.81■■□□□ 1.56
CIRBP-220ENST00000588917 CWC25Q9NXE8 425 aaPredicted RBP24.81■■□□□ 1.56
CIRBP-220ENST00000588917 IBTKQ9P2D0 1353 aaPredicted RBP24.8■■□□□ 1.56
CIRBP-220ENST00000588917 MS4A1P11836 297 aa24.8■■□□□ 1.56
CIRBP-220ENST00000588917 HSP90B1P14625 803 aaKnown RBP24.8■■□□□ 1.56
CIRBP-220ENST00000588917 ATF7IPQ6VMQ6 1270 aa24.8■■□□□ 1.56
CIRBP-220ENST00000588917 TRMT112Q9UI30 125 aaKnown RBP24.8■■□□□ 1.56
CIRBP-220ENST00000588917 UBN2Q6ZU65 1347 aa24.8■■□□□ 1.56
CIRBP-220ENST00000588917 FAM177BA6PVY3 158 aa24.79■■□□□ 1.56
CIRBP-220ENST00000588917 ALDH1L1O75891 902 aa24.79■■□□□ 1.56
CIRBP-220ENST00000588917 BEND3Q5T5X7 828 aa24.79■■□□□ 1.56
CIRBP-220ENST00000588917 SRCIN1Q9C0H9 1055 aa24.79■■□□□ 1.56
CIRBP-220ENST00000588917 IGKV5-2P06315 115 aa24.78■■□□□ 1.56
CIRBP-220ENST00000588917 CCT4P50991 539 aaKnown RBP24.78■■□□□ 1.56
CIRBP-220ENST00000588917 PRR5LQ6MZQ0 368 aa24.78■■□□□ 1.56
CIRBP-220ENST00000588917 PDZRN3Q9UPQ7 1066 aa24.78■■□□□ 1.56
CIRBP-220ENST00000588917 NEURL1BA8MQ27 555 aa24.77■■□□□ 1.56
CIRBP-220ENST00000588917 BRIP1Q9BX63 1249 aa24.77■■□□□ 1.56
CIRBP-220ENST00000588917 ARFGEF2Q9Y6D5 1785 aa24.77■■□□□ 1.56
CIRBP-220ENST00000588917 NTSR2O95665 410 aa24.76■■□□□ 1.55
CIRBP-220ENST00000588917 ZBTB38Q8NAP3 1195 aaPredicted RBP24.76■■□□□ 1.55
CIRBP-220ENST00000588917 SH3TC1Q8TE82 1336 aa24.76■■□□□ 1.55
CIRBP-220ENST00000588917 PDE6BP35913 854 aa24.75■■□□□ 1.55
CIRBP-220ENST00000588917 TGFB2P61812 414 aa24.75■■□□□ 1.55
CIRBP-220ENST00000588917 GCKRQ14397 625 aa24.75■■□□□ 1.55
CIRBP-220ENST00000588917 CWF19L2Q2TBE0 894 aaKnown RBP24.75■■□□□ 1.55
CIRBP-220ENST00000588917 SLC10A5Q5PT55 438 aa24.75■■□□□ 1.55
CIRBP-220ENST00000588917 PCCAP05165 728 aaPredicted RBP24.74■■□□□ 1.55
CIRBP-220ENST00000588917 TRIM27P14373 513 aa24.74■■□□□ 1.55
CIRBP-220ENST00000588917 ERFEQ4G0M1 354 aa24.73■■□□□ 1.55
CIRBP-220ENST00000588917 ANKRD36CQ5JPF3 1778 aa24.72■■□□□ 1.55
CIRBP-220ENST00000588917 PXDNLA1KZ92 1463 aa24.72■■□□□ 1.55
CIRBP-220ENST00000588917 INTS3Q68E01 1043 aaKnown RBP24.72■■□□□ 1.55
CIRBP-220ENST00000588917 NUTM1Q86Y26 1132 aa24.72■■□□□ 1.55
CIRBP-220ENST00000588917 FTSJ3Q8IY81 847 aaKnown RBP24.72■■□□□ 1.55
CIRBP-220ENST00000588917 FAM89AQ96GI7 184 aa24.72■■□□□ 1.55
CIRBP-220ENST00000588917 C9orf78Q9NZ63 289 aaPredicted RBP24.72■■□□□ 1.55
CIRBP-220ENST00000588917 H7C1W4 665 aa24.71■■□□□ 1.55
CIRBP-220ENST00000588917 DZIP1LQ8IYY4 767 aaKnown RBP24.71■■□□□ 1.55
CIRBP-220ENST00000588917 NLRP3Q96P20 1036 aa24.71■■□□□ 1.55
CIRBP-220ENST00000588917 NRXN2Q9P2S2 1712 aa24.7■■□□□ 1.54
CIRBP-220ENST00000588917 ABCC4O15439 1325 aa24.7■■□□□ 1.54
CIRBP-220ENST00000588917 WWC3Q9ULE0 1092 aa24.7■■□□□ 1.54
CIRBP-220ENST00000588917 HDAC5Q9UQL6 1122 aa24.7■■□□□ 1.54
CIRBP-220ENST00000588917 C10orf71Q711Q0 1435 aa24.69■■□□□ 1.54
CIRBP-220ENST00000588917 H0YIN7 160 aa24.69■■□□□ 1.54
CIRBP-220ENST00000588917 CLUAP1Q96AJ1 413 aa24.69■■□□□ 1.54
CIRBP-220ENST00000588917 GPBP1L1Q9HC44 474 aaPredicted RBP24.69■■□□□ 1.54
CIRBP-220ENST00000588917 CDHR2Q9BYE9 1310 aa24.68■■□□□ 1.54
CIRBP-220ENST00000588917 KLRG2A4D1S0 409 aaPredicted RBP24.68■■□□□ 1.54
CIRBP-220ENST00000588917 GRM8O00222 908 aa24.68■■□□□ 1.54
CIRBP-220ENST00000588917 IRS4O14654 1257 aaPredicted RBP24.68■■□□□ 1.54
CIRBP-220ENST00000588917 CCDC24Q8N4L8 307 aa24.68■■□□□ 1.54
CIRBP-220ENST00000588917 RIC1Q4ADV7 1423 aa24.68■■□□□ 1.54
CIRBP-220ENST00000588917 AFDNP55196 1824 aaKnown RBP24.66■■□□□ 1.54
CIRBP-220ENST00000588917 PDE3AQ14432 1141 aa24.66■■□□□ 1.54
CIRBP-220ENST00000588917 RTL5Q5HYW3 569 aaPredicted RBP24.66■■□□□ 1.54
CIRBP-220ENST00000588917 UBE3BQ7Z3V4 1068 aa24.66■■□□□ 1.54
CIRBP-220ENST00000588917 PDE8AO60658 829 aa24.65■■□□□ 1.54
CIRBP-220ENST00000588917 HCLS1P14317 486 aaPredicted RBP24.65■■□□□ 1.54
CIRBP-220ENST00000588917 C2CD5Q86YS7 1000 aa24.65■■□□□ 1.54
CIRBP-220ENST00000588917 SYNE4Q8N205 404 aa24.65■■□□□ 1.54
CIRBP-220ENST00000588917 UTYO14607 1347 aa24.64■■□□□ 1.54
CIRBP-220ENST00000588917 PLIN1O60240 522 aa24.63■■□□□ 1.53
CIRBP-220ENST00000588917 TMEM57Q8N5G2 664 aa24.63■■□□□ 1.53
CIRBP-220ENST00000588917 MASTLQ96GX5 879 aa24.63■■□□□ 1.53
CIRBP-220ENST00000588917 USP44Q9H0E7 712 aa24.63■■□□□ 1.53
CIRBP-220ENST00000588917 CHMP4BQ9H444 224 aaKnown RBP24.63■■□□□ 1.53
CIRBP-220ENST00000588917 A0A0G2JLW4 131 aa24.62■■□□□ 1.53
CIRBP-220ENST00000588917 GNAI3P08754 354 aa24.62■■□□□ 1.53
CIRBP-220ENST00000588917 NPR1P16066 1061 aa24.62■■□□□ 1.53
CIRBP-220ENST00000588917 ALDH1B1P30837 517 aa24.62■■□□□ 1.53
CIRBP-220ENST00000588917 CASP7P55210 303 aa24.62■■□□□ 1.53
CIRBP-220ENST00000588917 SF3B3Q15393 1217 aaKnown RBP24.62■■□□□ 1.53
CIRBP-220ENST00000588917 CRY2Q49AN0 593 aa24.62■■□□□ 1.53
CIRBP-220ENST00000588917 ZNF526Q8TF50 670 aaPredicted RBP24.62■■□□□ 1.53
CIRBP-220ENST00000588917 JARID2Q92833 1246 aaPredicted RBP24.62■■□□□ 1.53
CIRBP-220ENST00000588917 RPGRQ92834 1020 aaKnown RBP24.62■■□□□ 1.53
CIRBP-220ENST00000588917 PLA2G12BQ9BX93 195 aa24.62■■□□□ 1.53
CIRBP-220ENST00000588917 ABCC12Q96J65 1359 aa24.62■■□□□ 1.53
CIRBP-220ENST00000588917 SRGNP10124 158 aa24.61■■□□□ 1.53
CIRBP-220ENST00000588917 DPEP1P16444 411 aa24.61■■□□□ 1.53
CIRBP-220ENST00000588917 RRP1P56182 461 aaKnown RBP24.61■■□□□ 1.53
CIRBP-220ENST00000588917 STYK1Q6J9G0 422 aa24.61■■□□□ 1.53
CIRBP-220ENST00000588917 PIM2Q9P1W9 311 aa24.61■■□□□ 1.53
CIRBP-220ENST00000588917 TNNQ9UQP3 1299 aa24.61■■□□□ 1.53
CIRBP-220ENST00000588917 NBPF7P0C2Y1 421 aaPredicted RBP24.6■■□□□ 1.53
CIRBP-220ENST00000588917 CCDC152Q4G0S7 254 aa24.6■■□□□ 1.53
CIRBP-220ENST00000588917 ITPRIPQ8IWB1 547 aa24.6■■□□□ 1.53
CIRBP-220ENST00000588917 CNKSR1Q969H4 720 aa24.6■■□□□ 1.53
CIRBP-220ENST00000588917 RBM17Q96I25 401 aaKnown RBP24.6■■□□□ 1.53
CIRBP-220ENST00000588917 KIF13BQ9NQT8 1826 aa24.59■■□□□ 1.53
CIRBP-220ENST00000588917 CENPBP07199 599 aaPredicted RBP24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms