RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 R3HDM1Q15032 1099 aaKnown RBP21.37■■□□□ 1.01
SCAMP4-211ENST00000588907 CWF19L2Q2TBE0 894 aaKnown RBP21.37■■□□□ 1.01
SCAMP4-211ENST00000588907 C20orf194Q5TEA3 1177 aa21.37■■□□□ 1.01
SCAMP4-211ENST00000588907 TBC1D9BQ66K14 1250 aa21.37■■□□□ 1.01
SCAMP4-211ENST00000588907 C9orf78Q9NZ63 289 aaPredicted RBP21.37■■□□□ 1.01
SCAMP4-211ENST00000588907 GRM8O00222 908 aa21.36■■□□□ 1.01
SCAMP4-211ENST00000588907 GPTP24298 496 aa21.36■■□□□ 1.01
SCAMP4-211ENST00000588907 UTP14AQ9BVJ6 771 aaKnown RBP21.36■■□□□ 1.01
SCAMP4-211ENST00000588907 COG6Q9Y2V7 657 aa21.36■■□□□ 1.01
SCAMP4-211ENST00000588907 UTYO14607 1347 aa21.35■■□□□ 1.01
SCAMP4-211ENST00000588907 UBN2Q6ZU65 1347 aa21.35■■□□□ 1.01
SCAMP4-211ENST00000588907 NFIXQ14938 502 aa21.35■■□□□ 1.01
SCAMP4-211ENST00000588907 ZBTB38Q8NAP3 1195 aaPredicted RBP21.35■■□□□ 1.01
SCAMP4-211ENST00000588907 MTFR1LQ9H019 292 aa21.35■■□□□ 1.01
SCAMP4-211ENST00000588907 PCCAP05165 728 aaPredicted RBP21.34■■□□□ 1.01
SCAMP4-211ENST00000588907 TM4SF1P30408 202 aa21.34■■□□□ 1.01
SCAMP4-211ENST00000588907 TPTE2Q6XPS3 522 aa21.34■■□□□ 1.01
SCAMP4-211ENST00000588907 TRMT112Q9UI30 125 aaKnown RBP21.34■■□□□ 1.01
SCAMP4-211ENST00000588907 BICDL1Q6ZP65 573 aa21.33■■□□□ 1.01
SCAMP4-211ENST00000588907 NBPF5PQ86XG9 351 aaPredicted RBP21.33■■□□□ 1.01
SCAMP4-211ENST00000588907 SH3TC1Q8TE82 1336 aa21.32■■□□□ 1
SCAMP4-211ENST00000588907 UBTFL1P0CB47 393 aaPredicted RBP21.32■■□□□ 1
SCAMP4-211ENST00000588907 USP44Q9H0E7 712 aa21.32■■□□□ 1
SCAMP4-211ENST00000588907 PARP3Q9Y6F1 533 aa21.32■■□□□ 1
SCAMP4-211ENST00000588907 CDHR2Q9BYE9 1310 aa21.31■■□□□ 1
SCAMP4-211ENST00000588907 H7C1W4 665 aa21.31■■□□□ 1
SCAMP4-211ENST00000588907 ZBTB7BO15156 539 aaPredicted RBP21.31■■□□□ 1
SCAMP4-211ENST00000588907 NPHP1O15259 732 aa21.31■■□□□ 1
SCAMP4-211ENST00000588907 SUSD4Q5VX71 490 aa21.31■■□□□ 1
SCAMP4-211ENST00000588907 CRBNQ96SW2 442 aa21.31■■□□□ 1
SCAMP4-211ENST00000588907 RIC1Q4ADV7 1423 aa21.3■■□□□ 1
SCAMP4-211ENST00000588907 POLRMTO00411 1230 aaKnown RBP21.3■■□□□ 1
SCAMP4-211ENST00000588907 NTSR2O95665 410 aa21.3■■□□□ 1
SCAMP4-211ENST00000588907 MMP10P09238 476 aa21.3■■□□□ 1
SCAMP4-211ENST00000588907 GTF2E1P29083 439 aaPredicted RBP21.3■■□□□ 1
SCAMP4-211ENST00000588907 ERICH6BQ5W0A0 696 aa21.3■■□□□ 1
SCAMP4-211ENST00000588907 CNBD1Q8NA66 436 aa21.3■■□□□ 1
SCAMP4-211ENST00000588907 NRXN2Q9P2S2 1712 aa21.29■■□□□ 1
SCAMP4-211ENST00000588907 LAMB2P55268 1798 aa21.29■■□□□ 1
SCAMP4-211ENST00000588907 GNAI2P04899 355 aa21.29■■□□□ 1
SCAMP4-211ENST00000588907 POLD1P28340 1107 aa21.29■■□□□ 1
SCAMP4-211ENST00000588907 ST5P78524 1137 aa21.29■■□□□ 1
SCAMP4-211ENST00000588907 UBE3BQ7Z3V4 1068 aa21.29■■□□□ 1
SCAMP4-211ENST00000588907 MEIS3Q99687 375 aa21.29■■□□□ 1
SCAMP4-211ENST00000588907 PSDA5PKW4 1024 aaPredicted RBP21.28■■□□□ 1
SCAMP4-211ENST00000588907 SERPINB2P05120 415 aa21.28■■□□□ 1
SCAMP4-211ENST00000588907 MSL1Q68DK7 614 aa21.28■■□□□ 1
SCAMP4-211ENST00000588907 ZBTB40Q9NUA8 1239 aa21.28■■□□□ 1
SCAMP4-211ENST00000588907 NBPF7P0C2Y1 421 aaPredicted RBP21.27■■□□□ 1
SCAMP4-211ENST00000588907 DDR1Q08345 913 aa21.27■■□□□ 1
SCAMP4-211ENST00000588907 PLA2G12BQ9BX93 195 aa21.27■■□□□ 1
SCAMP4-211ENST00000588907 PDGFDQ9GZP0 370 aaPredicted RBP21.27■■□□□ 1
SCAMP4-211ENST00000588907 CASP7P55210 303 aa21.26■□□□□ 0.99
SCAMP4-211ENST00000588907 FAM89AQ96GI7 184 aa21.26■□□□□ 0.99
SCAMP4-211ENST00000588907 IRS4O14654 1257 aaPredicted RBP21.25■□□□□ 0.99
SCAMP4-211ENST00000588907 ZBTB7AO95365 584 aa21.25■□□□□ 0.99
SCAMP4-211ENST00000588907 SLC10A5Q5PT55 438 aa21.25■□□□□ 0.99
SCAMP4-211ENST00000588907 MYH3P11055 1940 aa21.24■□□□□ 0.99
SCAMP4-211ENST00000588907 FAM177BA6PVY3 158 aa21.24■□□□□ 0.99
SCAMP4-211ENST00000588907 PDE8AO60658 829 aa21.24■□□□□ 0.99
SCAMP4-211ENST00000588907 IRX6P78412 446 aaPredicted RBP21.24■□□□□ 0.99
SCAMP4-211ENST00000588907 PRR5LQ6MZQ0 368 aa21.24■□□□□ 0.99
SCAMP4-211ENST00000588907 EXOC6Q8TAG9 804 aa21.23■□□□□ 0.99
SCAMP4-211ENST00000588907 PDZRN3Q9UPQ7 1066 aa21.23■□□□□ 0.99
SCAMP4-211ENST00000588907 DDX60Q8IY21 1712 aaKnown RBP21.22■□□□□ 0.99
SCAMP4-211ENST00000588907 ERFEQ4G0M1 354 aa21.22■□□□□ 0.99
SCAMP4-211ENST00000588907 NUTM1Q86Y26 1132 aa21.22■□□□□ 0.99
SCAMP4-211ENST00000588907 SPON1Q9HCB6 807 aa21.22■□□□□ 0.99
SCAMP4-211ENST00000588907 LRRFIP2Q9Y608 721 aaKnown RBP21.22■□□□□ 0.99
SCAMP4-211ENST00000588907 RABL6Q3YEC7 729 aaPredicted RBP21.21■□□□□ 0.99
SCAMP4-211ENST00000588907 RTL5Q5HYW3 569 aaPredicted RBP21.21■□□□□ 0.99
SCAMP4-211ENST00000588907 RPAP2Q8IXW5 612 aaPredicted RBP21.21■□□□□ 0.99
SCAMP4-211ENST00000588907 SUCLG2Q96I99 432 aa21.21■□□□□ 0.99
SCAMP4-211ENST00000588907 NLRP3Q96P20 1036 aa21.21■□□□□ 0.99
SCAMP4-211ENST00000588907 BRIP1Q9BX63 1249 aa21.21■□□□□ 0.99
SCAMP4-211ENST00000588907 ABCC12Q96J65 1359 aa21.21■□□□□ 0.99
SCAMP4-211ENST00000588907 PDE6BP35913 854 aa21.2■□□□□ 0.98
SCAMP4-211ENST00000588907 CTSWP56202 376 aa21.2■□□□□ 0.98
SCAMP4-211ENST00000588907 MTX1Q13505 466 aa21.2■□□□□ 0.98
SCAMP4-211ENST00000588907 CCDC152Q4G0S7 254 aa21.2■□□□□ 0.98
SCAMP4-211ENST00000588907 BICC1Q9H694 974 aaKnown RBP21.2■□□□□ 0.98
SCAMP4-211ENST00000588907 HMMRO75330 724 aa21.19■□□□□ 0.98
SCAMP4-211ENST00000588907 ATF5Q9Y2D1 282 aaPredicted RBP21.19■□□□□ 0.98
SCAMP4-211ENST00000588907 RTL9Q8NET4 1388 aa21.19■□□□□ 0.98
SCAMP4-211ENST00000588907 C10orf71Q711Q0 1435 aa21.19■□□□□ 0.98
SCAMP4-211ENST00000588907 HCLS1P14317 486 aaPredicted RBP21.18■□□□□ 0.98
SCAMP4-211ENST00000588907 FOXO4P98177 505 aa21.18■□□□□ 0.98
SCAMP4-211ENST00000588907 SF3B3Q15393 1217 aaKnown RBP21.18■□□□□ 0.98
SCAMP4-211ENST00000588907 SGIP1Q9BQI5 828 aa21.18■□□□□ 0.98
SCAMP4-211ENST00000588907 CSF1RP07333 972 aa21.17■□□□□ 0.98
SCAMP4-211ENST00000588907 JARID2Q92833 1246 aaPredicted RBP21.17■□□□□ 0.98
SCAMP4-211ENST00000588907 KAZALD1Q96I82 304 aa21.17■□□□□ 0.98
SCAMP4-211ENST00000588907 KLRG2A4D1S0 409 aaPredicted RBP21.16■□□□□ 0.98
SCAMP4-211ENST00000588907 CEP85Q6P2H3 762 aa21.16■□□□□ 0.98
SCAMP4-211ENST00000588907 SYNE4Q8N205 404 aa21.16■□□□□ 0.98
SCAMP4-211ENST00000588907 ANKRD44Q8N8A2 993 aa21.16■□□□□ 0.98
SCAMP4-211ENST00000588907 TTLL11Q8NHH1 800 aa21.16■□□□□ 0.98
SCAMP4-211ENST00000588907 C1orf115Q9H7X2 142 aa21.16■□□□□ 0.98
SCAMP4-211ENST00000588907 KIF13BQ9NQT8 1826 aa21.15■□□□□ 0.98
SCAMP4-211ENST00000588907 PTGER2P43116 358 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms