RNA–Protein interactions for RNA: ENST00000588762.5

GHDC-209, Transcript of GH3 domain containing, humanhuman

TSL 1 (best)

Gene GHDC, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-209ENST00000588762 BRIP1Q9BX63 1249 aa19.72■□□□□ 0.75
GHDC-209ENST00000588762 CWC25Q9NXE8 425 aaPredicted RBP19.72■□□□□ 0.75
GHDC-209ENST00000588762 NOB1Q9ULX3 412 aaKnown RBP19.72■□□□□ 0.75
GHDC-209ENST00000588762 IPO8O15397 1037 aaKnown RBP19.71■□□□□ 0.75
GHDC-209ENST00000588762 BCAR3O75815 825 aa19.71■□□□□ 0.75
GHDC-209ENST00000588762 TGFB2P61812 414 aa19.71■□□□□ 0.75
GHDC-209ENST00000588762 SLC4A10Q6U841 1118 aa19.71■□□□□ 0.75
GHDC-209ENST00000588762 NUTM1Q86Y26 1132 aa19.71■□□□□ 0.75
GHDC-209ENST00000588762 LINS1Q8NG48 757 aa19.71■□□□□ 0.75
GHDC-209ENST00000588762 IGKV5-2P06315 115 aa19.7■□□□□ 0.74
GHDC-209ENST00000588762 PDE6BP35913 854 aa19.7■□□□□ 0.74
GHDC-209ENST00000588762 ERFEQ4G0M1 354 aa19.7■□□□□ 0.74
GHDC-209ENST00000588762 FRAT1Q92837 279 aaPredicted RBP19.7■□□□□ 0.74
GHDC-209ENST00000588762 API5Q9BZZ5 524 aaKnown RBP19.7■□□□□ 0.74
GHDC-209ENST00000588762 SH3TC1Q8TE82 1336 aa19.7■□□□□ 0.74
GHDC-209ENST00000588762 KIAA1551Q9HCM1 1747 aa19.69■□□□□ 0.74
GHDC-209ENST00000588762 NEURL1BA8MQ27 555 aa19.69■□□□□ 0.74
GHDC-209ENST00000588762 CWF19L2Q2TBE0 894 aaKnown RBP19.69■□□□□ 0.74
GHDC-209ENST00000588762 NLGN2Q8NFZ4 835 aa19.69■□□□□ 0.74
GHDC-209ENST00000588762 ARHGAP45Q92619 1136 aa19.69■□□□□ 0.74
GHDC-209ENST00000588762 RCAN3Q9UKA8 241 aa19.69■□□□□ 0.74
GHDC-209ENST00000588762 PDZRN3Q9UPQ7 1066 aa19.69■□□□□ 0.74
GHDC-209ENST00000588762 DLEC1Q9Y238 1755 aa19.68■□□□□ 0.74
GHDC-209ENST00000588762 PXDNLA1KZ92 1463 aa19.67■□□□□ 0.74
GHDC-209ENST00000588762 H0YIN7 160 aa19.67■□□□□ 0.74
GHDC-209ENST00000588762 BEND3Q5T5X7 828 aa19.67■□□□□ 0.74
GHDC-209ENST00000588762 ZBTB38Q8NAP3 1195 aaPredicted RBP19.67■□□□□ 0.74
GHDC-209ENST00000588762 FAM89AQ96GI7 184 aa19.67■□□□□ 0.74
GHDC-209ENST00000588762 SRCIN1Q9C0H9 1055 aa19.67■□□□□ 0.74
GHDC-209ENST00000588762 ABCC12Q96J65 1359 aa19.67■□□□□ 0.74
GHDC-209ENST00000588762 LAMB2P55268 1798 aa19.67■□□□□ 0.74
GHDC-209ENST00000588762 RIC1Q4ADV7 1423 aa19.67■□□□□ 0.74
GHDC-209ENST00000588762 DDX60Q8IY21 1712 aaKnown RBP19.66■□□□□ 0.74
GHDC-209ENST00000588762 A0A0G2JLW4 131 aa19.66■□□□□ 0.74
GHDC-209ENST00000588762 ALDH1L1O75891 902 aa19.66■□□□□ 0.74
GHDC-209ENST00000588762 PCCAP05165 728 aaPredicted RBP19.66■□□□□ 0.74
GHDC-209ENST00000588762 HSP90B1P14625 803 aaKnown RBP19.66■□□□□ 0.74
GHDC-209ENST00000588762 GCKRQ14397 625 aa19.66■□□□□ 0.74
GHDC-209ENST00000588762 RTL5Q5HYW3 569 aaPredicted RBP19.66■□□□□ 0.74
GHDC-209ENST00000588762 C2CD5Q86YS7 1000 aa19.66■□□□□ 0.74
GHDC-209ENST00000588762 TNRC6CQ9HCJ0 1690 aaKnown RBP19.65■□□□□ 0.74
GHDC-209ENST00000588762 COL11A2P13942 1736 aaPredicted RBP19.65■□□□□ 0.74
GHDC-209ENST00000588762 BRCA1P38398 1863 aaKnown RBP19.65■□□□□ 0.74
GHDC-209ENST00000588762 DPEP1P16444 411 aa19.65■□□□□ 0.74
GHDC-209ENST00000588762 SLC10A5Q5PT55 438 aa19.65■□□□□ 0.74
GHDC-209ENST00000588762 ZKSCAN2Q63HK3 967 aa19.65■□□□□ 0.74
GHDC-209ENST00000588762 MYH3P11055 1940 aa19.64■□□□□ 0.74
GHDC-209ENST00000588762 CHRNA5P30532 468 aa19.64■□□□□ 0.73
GHDC-209ENST00000588762 ATF7IPQ6VMQ6 1270 aa19.64■□□□□ 0.73
GHDC-209ENST00000588762 SYNE4Q8N205 404 aa19.64■□□□□ 0.73
GHDC-209ENST00000588762 NLRP3Q96P20 1036 aa19.64■□□□□ 0.73
GHDC-209ENST00000588762 CACNA1SQ13698 1873 aa19.64■□□□□ 0.73
GHDC-209ENST00000588762 IRS4O14654 1257 aaPredicted RBP19.63■□□□□ 0.73
GHDC-209ENST00000588762 HCLS1P14317 486 aaPredicted RBP19.63■□□□□ 0.73
GHDC-209ENST00000588762 CCT4P50991 539 aaKnown RBP19.63■□□□□ 0.73
GHDC-209ENST00000588762 KLRG2A4D1S0 409 aaPredicted RBP19.62■□□□□ 0.73
GHDC-209ENST00000588762 TRIM27P14373 513 aa19.62■□□□□ 0.73
GHDC-209ENST00000588762 UBE3BQ7Z3V4 1068 aa19.62■□□□□ 0.73
GHDC-209ENST00000588762 JARID2Q92833 1246 aaPredicted RBP19.62■□□□□ 0.73
GHDC-209ENST00000588762 C9orf78Q9NZ63 289 aaPredicted RBP19.62■□□□□ 0.73
GHDC-209ENST00000588762 PIM2Q9P1W9 311 aa19.62■□□□□ 0.73
GHDC-209ENST00000588762 CDHR2Q9BYE9 1310 aa19.61■□□□□ 0.73
GHDC-209ENST00000588762 DCAF8L1A6NGE4 600 aa19.61■□□□□ 0.73
GHDC-209ENST00000588762 H7C1W4 665 aa19.61■□□□□ 0.73
GHDC-209ENST00000588762 SRGNP10124 158 aa19.61■□□□□ 0.73
GHDC-209ENST00000588762 NPR1P16066 1061 aa19.61■□□□□ 0.73
GHDC-209ENST00000588762 RPGRQ92834 1020 aaKnown RBP19.61■□□□□ 0.73
GHDC-209ENST00000588762 ZNF622Q969S3 477 aaKnown RBP eCLIP19.61■□□□□ 0.73
GHDC-209ENST00000588762 MASTLQ96GX5 879 aa19.61■□□□□ 0.73
GHDC-209ENST00000588762 ABCC4O15439 1325 aa19.6■□□□□ 0.73
GHDC-209ENST00000588762 GRM8O00222 908 aa19.6■□□□□ 0.73
GHDC-209ENST00000588762 KCNA3P22001 575 aa19.6■□□□□ 0.73
GHDC-209ENST00000588762 CRY2Q49AN0 593 aa19.6■□□□□ 0.73
GHDC-209ENST00000588762 STYK1Q6J9G0 422 aa19.6■□□□□ 0.73
GHDC-209ENST00000588762 PELP1Q8IZL8 1130 aaKnown RBP19.6■□□□□ 0.73
GHDC-209ENST00000588762 CLUAP1Q96AJ1 413 aa19.6■□□□□ 0.73
GHDC-209ENST00000588762 PDE8AO60658 829 aa19.59■□□□□ 0.73
GHDC-209ENST00000588762 FTSJ3Q8IY81 847 aaKnown RBP19.59■□□□□ 0.73
GHDC-209ENST00000588762 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.59■□□□□ 0.73
GHDC-209ENST00000588762 WWC3Q9ULE0 1092 aa19.59■□□□□ 0.73
GHDC-209ENST00000588762 ARFGEF1Q9Y6D6 1849 aa19.59■□□□□ 0.73
GHDC-209ENST00000588762 MS4A1P11836 297 aa19.58■□□□□ 0.72
GHDC-209ENST00000588762 GPR162Q16538 588 aa19.58■□□□□ 0.72
GHDC-209ENST00000588762 DALRD3Q5D0E6 543 aaKnown RBP19.58■□□□□ 0.72
GHDC-209ENST00000588762 INTS3Q68E01 1043 aaKnown RBP19.58■□□□□ 0.72
GHDC-209ENST00000588762 C3orf67Q6ZVT6 689 aa19.58■□□□□ 0.72
GHDC-209ENST00000588762 TTLL6Q8N841 843 aa19.58■□□□□ 0.72
GHDC-209ENST00000588762 CNKSR1Q969H4 720 aa19.58■□□□□ 0.72
GHDC-209ENST00000588762 RBM17Q96I25 401 aaKnown RBP19.58■□□□□ 0.72
GHDC-209ENST00000588762 ALDH1B1P30837 517 aa19.57■□□□□ 0.72
GHDC-209ENST00000588762 DZIP1LQ8IYY4 767 aaKnown RBP19.57■□□□□ 0.72
GHDC-209ENST00000588762 TNNQ9UQP3 1299 aa19.57■□□□□ 0.72
GHDC-209ENST00000588762 SLX4Q8IY92 1834 aa19.56■□□□□ 0.72
GHDC-209ENST00000588762 HOXA10P31260 410 aaPredicted RBP19.56■□□□□ 0.72
GHDC-209ENST00000588762 CASP7P55210 303 aa19.56■□□□□ 0.72
GHDC-209ENST00000588762 SF3B3Q15393 1217 aaKnown RBP19.56■□□□□ 0.72
GHDC-209ENST00000588762 BCS1LQ9Y276 419 aa19.56■□□□□ 0.72
GHDC-209ENST00000588762 TAF1P21675 1872 aa19.55■□□□□ 0.72
GHDC-209ENST00000588762 CTSWP56202 376 aa19.55■□□□□ 0.72
GHDC-209ENST00000588762 CCDC152Q4G0S7 254 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms