RNA–Protein interactions for RNA: ENST00000588230.5

CIRBP-217, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5 BASIC

Gene CIRBP, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-217ENST00000588230 CNKSR1Q969H4 720 aa24.75■■□□□ 1.55
CIRBP-217ENST00000588230 PARP10Q53GL7 1025 aa24.74■■□□□ 1.55
CIRBP-217ENST00000588230 SUSD4Q5VX71 490 aa24.74■■□□□ 1.55
CIRBP-217ENST00000588230 C7orf43Q8WVR3 580 aa24.74■■□□□ 1.55
CIRBP-217ENST00000588230 MYH16Q9H6N6 1097 aa24.74■■□□□ 1.55
CIRBP-217ENST00000588230 ANKRD36CQ5JPF3 1778 aa24.73■■□□□ 1.55
CIRBP-217ENST00000588230 NTSR2O95665 410 aa24.73■■□□□ 1.55
CIRBP-217ENST00000588230 NPR1P16066 1061 aa24.73■■□□□ 1.55
CIRBP-217ENST00000588230 LMNB1P20700 586 aa24.73■■□□□ 1.55
CIRBP-217ENST00000588230 CRY2Q49AN0 593 aa24.73■■□□□ 1.55
CIRBP-217ENST00000588230 ERFEQ4G0M1 354 aa24.73■■□□□ 1.55
CIRBP-217ENST00000588230 PPP1R42Q7Z4L9 355 aa24.73■■□□□ 1.55
CIRBP-217ENST00000588230 TCIRG1Q13488 830 aa24.72■■□□□ 1.55
CIRBP-217ENST00000588230 MIER1Q8N108 512 aa24.72■■□□□ 1.55
CIRBP-217ENST00000588230 STK31Q9BXU1 1019 aa24.72■■□□□ 1.55
CIRBP-217ENST00000588230 ZNF219Q9P2Y4 722 aaPredicted RBP24.72■■□□□ 1.55
CIRBP-217ENST00000588230 TIAM2Q8IVF5 1701 aa24.72■■□□□ 1.55
CIRBP-217ENST00000588230 CCDC88AQ3V6T2 1871 aa24.71■■□□□ 1.55
CIRBP-217ENST00000588230 PHAXQ9H814 394 aaKnown RBP24.71■■□□□ 1.55
CIRBP-217ENST00000588230 NMRK2Q9NPI5 230 aa24.71■■□□□ 1.55
CIRBP-217ENST00000588230 SPINK5Q9NQ38 1064 aaPredicted RBP24.71■■□□□ 1.55
CIRBP-217ENST00000588230 LTBP3Q9NS15 1303 aa24.7■■□□□ 1.54
CIRBP-217ENST00000588230 ZC3H4Q9UPT8 1303 aaKnown RBP24.7■■□□□ 1.54
CIRBP-217ENST00000588230 CEP350Q5VT06 3117 aa24.7■■□□□ 1.54
CIRBP-217ENST00000588230 EXOSC9Q06265 439 aaKnown RBP24.7■■□□□ 1.54
CIRBP-217ENST00000588230 UTP14AQ9BVJ6 771 aaKnown RBP24.7■■□□□ 1.54
CIRBP-217ENST00000588230 TCERG1O14776 1098 aaKnown RBP24.69■■□□□ 1.54
CIRBP-217ENST00000588230 RIC3Q7Z5B4 369 aa24.69■■□□□ 1.54
CIRBP-217ENST00000588230 SNED1Q8TER0 1413 aa24.69■■□□□ 1.54
CIRBP-217ENST00000588230 ZNF521Q96K83 1311 aa24.68■■□□□ 1.54
CIRBP-217ENST00000588230 C3orf67Q6ZVT6 689 aa24.68■■□□□ 1.54
CIRBP-217ENST00000588230 NLRP10Q86W26 655 aa24.68■■□□□ 1.54
CIRBP-217ENST00000588230 DICER1Q9UPY3 1922 aaKnown RBP24.67■■□□□ 1.54
CIRBP-217ENST00000588230 DDX58O95786 925 aaKnown RBP24.67■■□□□ 1.54
CIRBP-217ENST00000588230 OLFM4Q6UX06 510 aa24.66■■□□□ 1.54
CIRBP-217ENST00000588230 VAMP4O75379 141 aa24.65■■□□□ 1.54
CIRBP-217ENST00000588230 SLC4A2P04920 1241 aa24.65■■□□□ 1.54
CIRBP-217ENST00000588230 HOXA10P31260 410 aaPredicted RBP24.65■■□□□ 1.54
CIRBP-217ENST00000588230 TAOK3Q9H2K8 898 aa24.65■■□□□ 1.54
CIRBP-217ENST00000588230 TRMT112Q9UI30 125 aaKnown RBP24.65■■□□□ 1.54
CIRBP-217ENST00000588230 RNF123Q5XPI4 1314 aa24.64■■□□□ 1.54
CIRBP-217ENST00000588230 ATP5J2-PTCD1G3V325 749 aa24.64■■□□□ 1.54
CIRBP-217ENST00000588230 SOGA3Q5TF21 947 aa24.64■■□□□ 1.54
CIRBP-217ENST00000588230 ISCA1Q9BUE6 129 aa24.64■■□□□ 1.54
CIRBP-217ENST00000588230 SLC10A5Q5PT55 438 aa24.63■■□□□ 1.53
CIRBP-217ENST00000588230 KDM2BQ8NHM5 1336 aa24.62■■□□□ 1.53
CIRBP-217ENST00000588230 CCDC93Q567U6 631 aa24.62■■□□□ 1.53
CIRBP-217ENST00000588230 RPGRQ92834 1020 aaKnown RBP24.62■■□□□ 1.53
CIRBP-217ENST00000588230 ZNF428Q96B54 188 aa24.62■■□□□ 1.53
CIRBP-217ENST00000588230 NLRP3Q96P20 1036 aa24.62■■□□□ 1.53
CIRBP-217ENST00000588230 E9PSI1 815 aa24.61■■□□□ 1.53
CIRBP-217ENST00000588230 ALDH1B1P30837 517 aa24.61■■□□□ 1.53
CIRBP-217ENST00000588230 SLC51AQ86UW1 340 aa24.61■■□□□ 1.53
CIRBP-217ENST00000588230 SYNE4Q8N205 404 aa24.61■■□□□ 1.53
CIRBP-217ENST00000588230 LAMB2P55268 1798 aa24.61■■□□□ 1.53
CIRBP-217ENST00000588230 SH3TC1Q8TE82 1336 aa24.61■■□□□ 1.53
CIRBP-217ENST00000588230 GLTPD2A6NH11 291 aa24.6■■□□□ 1.53
CIRBP-217ENST00000588230 TRIM28Q13263 835 aaKnown RBP24.6■■□□□ 1.53
CIRBP-217ENST00000588230 KSR2Q6VAB6 950 aa24.6■■□□□ 1.53
CIRBP-217ENST00000588230 MYD88Q99836 296 aa24.6■■□□□ 1.53
CIRBP-217ENST00000588230 MAP3K2Q9Y2U5 619 aa24.6■■□□□ 1.53
CIRBP-217ENST00000588230 TOMM70O94826 608 aa24.59■■□□□ 1.53
CIRBP-217ENST00000588230 G2E3Q7L622 706 aa24.59■■□□□ 1.53
CIRBP-217ENST00000588230 METTL22Q9BUU2 404 aaPredicted RBP24.59■■□□□ 1.53
CIRBP-217ENST00000588230 PI4KAP2A4QPH2 592 aa24.58■■□□□ 1.53
CIRBP-217ENST00000588230 HCLS1P14317 486 aaPredicted RBP24.58■■□□□ 1.53
CIRBP-217ENST00000588230 FKBP4Q02790 459 aaKnown RBP eCLIP24.58■■□□□ 1.53
CIRBP-217ENST00000588230 PI4KAP1Q8N8J0 262 aa24.58■■□□□ 1.53
CIRBP-217ENST00000588230 CRAMP1Q96RY5 1269 aa24.58■■□□□ 1.53
CIRBP-217ENST00000588230 CACNA1FO60840 1977 aa24.57■■□□□ 1.52
CIRBP-217ENST00000588230 SLFN5Q08AF3 891 aa24.57■■□□□ 1.52
CIRBP-217ENST00000588230 FLIIQ13045 1269 aa24.57■■□□□ 1.52
CIRBP-217ENST00000588230 RRAGCQ9HB90 399 aa24.57■■□□□ 1.52
CIRBP-217ENST00000588230 WDR90Q96KV7 1748 aa24.57■■□□□ 1.52
CIRBP-217ENST00000588230 DDX60Q8IY21 1712 aaKnown RBP24.56■■□□□ 1.52
CIRBP-217ENST00000588230 FAM89AQ96GI7 184 aa24.56■■□□□ 1.52
CIRBP-217ENST00000588230 RBM17Q96I25 401 aaKnown RBP24.56■■□□□ 1.52
CIRBP-217ENST00000588230 HSPA6P17066 643 aa24.55■■□□□ 1.52
CIRBP-217ENST00000588230 NEXNQ0ZGT2 675 aa24.55■■□□□ 1.52
CIRBP-217ENST00000588230 FKBP5Q13451 457 aaPredicted RBP24.55■■□□□ 1.52
CIRBP-217ENST00000588230 RTKN2Q8IZC4 609 aa24.55■■□□□ 1.52
CIRBP-217ENST00000588230 CCDC191Q8NCU4 936 aa24.55■■□□□ 1.52
CIRBP-217ENST00000588230 CDCA7LQ96GN5 454 aa24.55■■□□□ 1.52
CIRBP-217ENST00000588230 POTECB2RU33 542 aa24.54■■□□□ 1.52
CIRBP-217ENST00000588230 RTL5Q5HYW3 569 aaPredicted RBP24.54■■□□□ 1.52
CIRBP-217ENST00000588230 ZNF277Q9NRM2 450 aaPredicted RBP24.54■■□□□ 1.52
CIRBP-217ENST00000588230 CWC25Q9NXE8 425 aaPredicted RBP24.54■■□□□ 1.52
CIRBP-217ENST00000588230 COL4A5P29400 1685 aa24.53■■□□□ 1.52
CIRBP-217ENST00000588230 RBM46Q8TBY0 533 aaKnown RBP24.53■■□□□ 1.52
CIRBP-217ENST00000588230 PSMD1Q99460 953 aa24.53■■□□□ 1.52
CIRBP-217ENST00000588230 ABCC4O15439 1325 aa24.53■■□□□ 1.52
CIRBP-217ENST00000588230 ZBTB38Q8NAP3 1195 aaPredicted RBP24.52■■□□□ 1.52
CIRBP-217ENST00000588230 IRS4O14654 1257 aaPredicted RBP24.51■■□□□ 1.51
CIRBP-217ENST00000588230 PPEF1O14829 653 aaPredicted RBP24.51■■□□□ 1.51
CIRBP-217ENST00000588230 CC2D2BQ6DHV5 1058 aa24.51■■□□□ 1.51
CIRBP-217ENST00000588230 HSP90B1P14625 803 aaKnown RBP24.5■■□□□ 1.51
CIRBP-217ENST00000588230 COL4A1P02462 1669 aa24.5■■□□□ 1.51
CIRBP-217ENST00000588230 PCCAP05165 728 aaPredicted RBP24.49■■□□□ 1.51
CIRBP-217ENST00000588230 IGKV5-2P06315 115 aa24.49■■□□□ 1.51
CIRBP-217ENST00000588230 IARSP41252 1262 aaKnown RBP24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms