RNA–Protein interactions for RNA: ENST00000585894.5

RETREG3-203, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 1 (best) BASIC

Gene RETREG3, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-203ENST00000585894 LAMB2P55268 1798 aa16.13■□□□□ 0.17
RETREG3-203ENST00000585894 PARP10Q53GL7 1025 aa16.13■□□□□ 0.17
RETREG3-203ENST00000585894 RTL5Q5HYW3 569 aaPredicted RBP16.13■□□□□ 0.17
RETREG3-203ENST00000585894 METTL22Q9BUU2 404 aaPredicted RBP16.13■□□□□ 0.17
RETREG3-203ENST00000585894 DDX60Q8IY21 1712 aaKnown RBP16.12■□□□□ 0.17
RETREG3-203ENST00000585894 KCNA3P22001 575 aa16.12■□□□□ 0.17
RETREG3-203ENST00000585894 CWF19L2Q2TBE0 894 aaKnown RBP16.12■□□□□ 0.17
RETREG3-203ENST00000585894 JARID2Q92833 1246 aaPredicted RBP16.12■□□□□ 0.17
RETREG3-203ENST00000585894 UTP14AQ9BVJ6 771 aaKnown RBP16.12■□□□□ 0.17
RETREG3-203ENST00000585894 UTRNP46939 3433 aa16.12■□□□□ 0.17
RETREG3-203ENST00000585894 IGKV5-2P06315 115 aa16.11■□□□□ 0.17
RETREG3-203ENST00000585894 RARSP54136 660 aaKnown RBP16.11■□□□□ 0.17
RETREG3-203ENST00000585894 TGFB2P61812 414 aa16.11■□□□□ 0.17
RETREG3-203ENST00000585894 PPP1R42Q7Z4L9 355 aa16.11■□□□□ 0.17
RETREG3-203ENST00000585894 C2CD5Q86YS7 1000 aa16.11■□□□□ 0.17
RETREG3-203ENST00000585894 BRIP1Q9BX63 1249 aa16.11■□□□□ 0.17
RETREG3-203ENST00000585894 NYXQ9GZU5 481 aa16.11■□□□□ 0.17
RETREG3-203ENST00000585894 TRMT112Q9UI30 125 aaKnown RBP16.11■□□□□ 0.17
RETREG3-203ENST00000585894 IBTKQ9P2D0 1353 aaPredicted RBP16.11■□□□□ 0.17
RETREG3-203ENST00000585894 YBX3P16989 372 aaKnown RBP eCLIP16.11■□□□□ 0.17
RETREG3-203ENST00000585894 ALDH1L2Q3SY69 923 aa16.11■□□□□ 0.17
RETREG3-203ENST00000585894 C3orf67Q6ZVT6 689 aa16.11■□□□□ 0.17
RETREG3-203ENST00000585894 DNAAF4Q8WXU2 420 aa16.11■□□□□ 0.17
RETREG3-203ENST00000585894 CT47B1P0C2W7 299 aaPredicted RBP16.1■□□□□ 0.17
RETREG3-203ENST00000585894 HCLS1P14317 486 aaPredicted RBP16.1■□□□□ 0.17
RETREG3-203ENST00000585894 FAM89AQ96GI7 184 aa16.1■□□□□ 0.17
RETREG3-203ENST00000585894 BCAR3O75815 825 aa16.08■□□□□ 0.17
RETREG3-203ENST00000585894 TAF1P21675 1872 aa16.08■□□□□ 0.17
RETREG3-203ENST00000585894 PDE6BP35913 854 aa16.08■□□□□ 0.17
RETREG3-203ENST00000585894 NEXNQ0ZGT2 675 aa16.08■□□□□ 0.17
RETREG3-203ENST00000585894 TRIM28Q13263 835 aaKnown RBP16.08■□□□□ 0.17
RETREG3-203ENST00000585894 GPR162Q16538 588 aa16.08■□□□□ 0.17
RETREG3-203ENST00000585894 SLC4A10Q6U841 1118 aa16.08■□□□□ 0.17
RETREG3-203ENST00000585894 SH3TC1Q8TE82 1336 aa16.08■□□□□ 0.16
RETREG3-203ENST00000585894 NEURL1BA8MQ27 555 aa16.08■□□□□ 0.16
RETREG3-203ENST00000585894 H0YIN7 160 aa16.08■□□□□ 0.16
RETREG3-203ENST00000585894 CWC25Q9NXE8 425 aaPredicted RBP16.08■□□□□ 0.16
RETREG3-203ENST00000585894 NOB1Q9ULX3 412 aaKnown RBP16.08■□□□□ 0.16
RETREG3-203ENST00000585894 SLX4Q8IY92 1834 aa16.07■□□□□ 0.16
RETREG3-203ENST00000585894 ARFGEF1Q9Y6D6 1849 aa16.07■□□□□ 0.16
RETREG3-203ENST00000585894 CCDC191Q8NCU4 936 aa16.07■□□□□ 0.16
RETREG3-203ENST00000585894 ZNF622Q969S3 477 aaKnown RBP eCLIP16.07■□□□□ 0.16
RETREG3-203ENST00000585894 BCS1LQ9Y276 419 aa16.07■□□□□ 0.16
RETREG3-203ENST00000585894 SRGNP10124 158 aa16.06■□□□□ 0.16
RETREG3-203ENST00000585894 BEND3Q5T5X7 828 aa16.06■□□□□ 0.16
RETREG3-203ENST00000585894 PIM2Q9P1W9 311 aa16.06■□□□□ 0.16
RETREG3-203ENST00000585894 TNNQ9UQP3 1299 aa16.05■□□□□ 0.16
RETREG3-203ENST00000585894 PTPRCP08575 1304 aa16.05■□□□□ 0.16
RETREG3-203ENST00000585894 RIC1Q4ADV7 1423 aa16.05■□□□□ 0.16
RETREG3-203ENST00000585894 KLRG2A4D1S0 409 aaPredicted RBP16.05■□□□□ 0.16
RETREG3-203ENST00000585894 ZBTB38Q8NAP3 1195 aaPredicted RBP16.05■□□□□ 0.16
RETREG3-203ENST00000585894 LINS1Q8NG48 757 aa16.05■□□□□ 0.16
RETREG3-203ENST00000585894 ZNF219Q9P2Y4 722 aaPredicted RBP16.05■□□□□ 0.16
RETREG3-203ENST00000585894 RNF123Q5XPI4 1314 aa16.05■□□□□ 0.16
RETREG3-203ENST00000585894 COL4A1P02462 1669 aa16.04■□□□□ 0.16
RETREG3-203ENST00000585894 IRS4O14654 1257 aaPredicted RBP16.04■□□□□ 0.16
RETREG3-203ENST00000585894 PCCAP05165 728 aaPredicted RBP16.04■□□□□ 0.16
RETREG3-203ENST00000585894 GCKRQ14397 625 aa16.04■□□□□ 0.16
RETREG3-203ENST00000585894 SLC10A5Q5PT55 438 aa16.04■□□□□ 0.16
RETREG3-203ENST00000585894 SLC51AQ86UW1 340 aa16.04■□□□□ 0.16
RETREG3-203ENST00000585894 FRAT1Q92837 279 aaPredicted RBP16.04■□□□□ 0.16
RETREG3-203ENST00000585894 MYH3P11055 1940 aa16.04■□□□□ 0.16
RETREG3-203ENST00000585894 CRY2Q49AN0 593 aa16.03■□□□□ 0.16
RETREG3-203ENST00000585894 DALRD3Q5D0E6 543 aaKnown RBP16.03■□□□□ 0.16
RETREG3-203ENST00000585894 UBE3BQ7Z3V4 1068 aa16.03■□□□□ 0.16
RETREG3-203ENST00000585894 MASTLQ96GX5 879 aa16.03■□□□□ 0.16
RETREG3-203ENST00000585894 BRPF1P55201 1214 aaPredicted RBP16.02■□□□□ 0.16
RETREG3-203ENST00000585894 TTLL6Q8N841 843 aa16.02■□□□□ 0.16
RETREG3-203ENST00000585894 NLRP3Q96P20 1036 aa16.02■□□□□ 0.16
RETREG3-203ENST00000585894 NPR1P16066 1061 aa16.02■□□□□ 0.15
RETREG3-203ENST00000585894 STYK1Q6J9G0 422 aa16.02■□□□□ 0.15
RETREG3-203ENST00000585894 RPGRQ92834 1020 aaKnown RBP16.02■□□□□ 0.15
RETREG3-203ENST00000585894 CCDC85AQ96PX6 553 aaPredicted RBP16.02■□□□□ 0.15
RETREG3-203ENST00000585894 KIF16BQ96L93 1317 aa16.01■□□□□ 0.15
RETREG3-203ENST00000585894 DCAF8L1A6NGE4 600 aa16.01■□□□□ 0.15
RETREG3-203ENST00000585894 H7C1W4 665 aa16.01■□□□□ 0.15
RETREG3-203ENST00000585894 PRPF40BQ6NWY9 871 aaKnown RBP16.01■□□□□ 0.15
RETREG3-203ENST00000585894 OLFM4Q6UX06 510 aa16.01■□□□□ 0.15
RETREG3-203ENST00000585894 SRCIN1Q9C0H9 1055 aa16.01■□□□□ 0.15
RETREG3-203ENST00000585894 CASP7P55210 303 aa16■□□□□ 0.15
RETREG3-203ENST00000585894 PDZRN3Q9UPQ7 1066 aa16■□□□□ 0.15
RETREG3-203ENST00000585894 C21orf2O43822 256 aa15.99■□□□□ 0.15
RETREG3-203ENST00000585894 CLUAP1Q96AJ1 413 aa15.99■□□□□ 0.15
RETREG3-203ENST00000585894 SPEF2Q9C093 1822 aa15.99■□□□□ 0.15
RETREG3-203ENST00000585894 CHD4Q14839 1912 aa15.99■□□□□ 0.15
RETREG3-203ENST00000585894 CDHR2Q9BYE9 1310 aa15.99■□□□□ 0.15
RETREG3-203ENST00000585894 ALDH1L1O75891 902 aa15.99■□□□□ 0.15
RETREG3-203ENST00000585894 TRIM27P14373 513 aa15.99■□□□□ 0.15
RETREG3-203ENST00000585894 CNKSR1Q969H4 720 aa15.99■□□□□ 0.15
RETREG3-203ENST00000585894 API5Q9BZZ5 524 aaKnown RBP15.99■□□□□ 0.15
RETREG3-203ENST00000585894 ABCC4O15439 1325 aa15.98■□□□□ 0.15
RETREG3-203ENST00000585894 HOXA10P31260 410 aaPredicted RBP15.98■□□□□ 0.15
RETREG3-203ENST00000585894 ARHGAP27Q6ZUM4 889 aa15.98■□□□□ 0.15
RETREG3-203ENST00000585894 RBM17Q96I25 401 aaKnown RBP15.98■□□□□ 0.15
RETREG3-203ENST00000585894 CCDC88AQ3V6T2 1871 aa15.97■□□□□ 0.15
RETREG3-203ENST00000585894 GRM8O00222 908 aa15.97■□□□□ 0.15
RETREG3-203ENST00000585894 PDE8AO60658 829 aa15.97■□□□□ 0.15
RETREG3-203ENST00000585894 NBPF7P0C2Y1 421 aaPredicted RBP15.97■□□□□ 0.15
RETREG3-203ENST00000585894 ATF7IPQ6VMQ6 1270 aa15.97■□□□□ 0.15
RETREG3-203ENST00000585894 C9orf78Q9NZ63 289 aaPredicted RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms