RNA–Protein interactions for RNA: ENST00000584483.5

SMARCD2-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 821 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-211ENST00000584483 PNMA6EA0A0J9YXQ4 647 aa17.96■□□□□ 0.47
SMARCD2-211ENST00000584483 USPL1Q5W0Q7 1092 aa17.96■□□□□ 0.47
SMARCD2-211ENST00000584483 UBE3BQ7Z3V4 1068 aa17.96■□□□□ 0.47
SMARCD2-211ENST00000584483 RWDD1Q9H446 243 aaPredicted RBP17.96■□□□□ 0.47
SMARCD2-211ENST00000584483 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.95■□□□□ 0.46
SMARCD2-211ENST00000584483 HSP90AB3PQ58FF7 597 aa17.95■□□□□ 0.46
SMARCD2-211ENST00000584483 RTL5Q5HYW3 569 aaPredicted RBP17.95■□□□□ 0.46
SMARCD2-211ENST00000584483 TRAPPC3LQ5T215 181 aa17.95■□□□□ 0.46
SMARCD2-211ENST00000584483 CENPQQ7L2Z9 268 aaPredicted RBP17.95■□□□□ 0.46
SMARCD2-211ENST00000584483 SKAP1Q86WV1 359 aa17.95■□□□□ 0.46
SMARCD2-211ENST00000584483 SUSD4Q5VX71 490 aa17.94■□□□□ 0.46
SMARCD2-211ENST00000584483 TBC1D9BQ66K14 1250 aa17.94■□□□□ 0.46
SMARCD2-211ENST00000584483 CLEC4GQ6UXB4 293 aa17.94■□□□□ 0.46
SMARCD2-211ENST00000584483 BICC1Q9H694 974 aaKnown RBP17.94■□□□□ 0.46
SMARCD2-211ENST00000584483 ANO8Q9HCE9 1232 aaPredicted RBP17.94■□□□□ 0.46
SMARCD2-211ENST00000584483 USP42Q9H9J4 1324 aaKnown RBP17.94■□□□□ 0.46
SMARCD2-211ENST00000584483 PCCAP05165 728 aaPredicted RBP17.93■□□□□ 0.46
SMARCD2-211ENST00000584483 SSFA2P28290 1259 aa17.93■□□□□ 0.46
SMARCD2-211ENST00000584483 FOXO4P98177 505 aa17.93■□□□□ 0.46
SMARCD2-211ENST00000584483 POLA2Q14181 598 aa17.93■□□□□ 0.46
SMARCD2-211ENST00000584483 PPP1R42Q7Z4L9 355 aa17.93■□□□□ 0.46
SMARCD2-211ENST00000584483 SMC5Q8IY18 1101 aa17.93■□□□□ 0.46
SMARCD2-211ENST00000584483 FAM89AQ96GI7 184 aa17.93■□□□□ 0.46
SMARCD2-211ENST00000584483 RGL2O15211 777 aa17.92■□□□□ 0.46
SMARCD2-211ENST00000584483 ADRA2BP18089 450 aa17.92■□□□□ 0.46
SMARCD2-211ENST00000584483 MTX1Q13505 466 aa17.92■□□□□ 0.46
SMARCD2-211ENST00000584483 SSH3Q8TE77 659 aa17.92■□□□□ 0.46
SMARCD2-211ENST00000584483 ZPR1O75312 459 aa17.91■□□□□ 0.46
SMARCD2-211ENST00000584483 RFC4P35249 363 aa17.91■□□□□ 0.46
SMARCD2-211ENST00000584483 COL23A1Q86Y22 540 aaPredicted RBP17.91■□□□□ 0.46
SMARCD2-211ENST00000584483 ZBTB38Q8NAP3 1195 aaPredicted RBP17.91■□□□□ 0.46
SMARCD2-211ENST00000584483 DCTPP1Q9H773 170 aa17.91■□□□□ 0.46
SMARCD2-211ENST00000584483 NIP7Q9Y221 180 aaKnown RBP eCLIP17.91■□□□□ 0.46
SMARCD2-211ENST00000584483 COL24A1Q17RW2 1714 aa17.9■□□□□ 0.46
SMARCD2-211ENST00000584483 NTSR2O95665 410 aa17.9■□□□□ 0.46
SMARCD2-211ENST00000584483 GYS1P13807 737 aa17.9■□□□□ 0.46
SMARCD2-211ENST00000584483 BAG6P46379 1132 aa17.9■□□□□ 0.46
SMARCD2-211ENST00000584483 RABL6Q3YEC7 729 aaPredicted RBP17.9■□□□□ 0.46
SMARCD2-211ENST00000584483 DDX60Q8IY21 1712 aaKnown RBP17.89■□□□□ 0.46
SMARCD2-211ENST00000584483 FAM177BA6PVY3 158 aa17.89■□□□□ 0.45
SMARCD2-211ENST00000584483 SF3B2Q13435 895 aaKnown RBP17.89■□□□□ 0.45
SMARCD2-211ENST00000584483 PARP10Q53GL7 1025 aa17.89■□□□□ 0.45
SMARCD2-211ENST00000584483 BICDL1Q6ZP65 573 aa17.89■□□□□ 0.45
SMARCD2-211ENST00000584483 TFCP2L1Q9NZI6 479 aa17.89■□□□□ 0.45
SMARCD2-211ENST00000584483 TRMT112Q9UI30 125 aaKnown RBP17.89■□□□□ 0.45
SMARCD2-211ENST00000584483 PDZRN3Q9UPQ7 1066 aa17.89■□□□□ 0.45
SMARCD2-211ENST00000584483 ZNF652Q9Y2D9 606 aa17.89■□□□□ 0.45
SMARCD2-211ENST00000584483 PNPLA7Q6ZV29 1317 aa17.89■□□□□ 0.45
SMARCD2-211ENST00000584483 CDHR2Q9BYE9 1310 aa17.89■□□□□ 0.45
SMARCD2-211ENST00000584483 PLA2G12BQ9BX93 195 aa17.88■□□□□ 0.45
SMARCD2-211ENST00000584483 SRGAP3O43295 1099 aa17.87■□□□□ 0.45
SMARCD2-211ENST00000584483 HMGB2P26583 209 aaKnown RBP17.87■□□□□ 0.45
SMARCD2-211ENST00000584483 RFX5P48382 616 aaPredicted RBP17.87■□□□□ 0.45
SMARCD2-211ENST00000584483 SLC15A2Q16348 729 aa17.87■□□□□ 0.45
SMARCD2-211ENST00000584483 LMBR1LQ6UX01 489 aa17.87■□□□□ 0.45
SMARCD2-211ENST00000584483 CCDC125Q86Z20 511 aa17.87■□□□□ 0.45
SMARCD2-211ENST00000584483 UTP14AQ9BVJ6 771 aaKnown RBP17.87■□□□□ 0.45
SMARCD2-211ENST00000584483 QSER1Q2KHR3 1735 aa17.86■□□□□ 0.45
SMARCD2-211ENST00000584483 IRS4O14654 1257 aaPredicted RBP17.86■□□□□ 0.45
SMARCD2-211ENST00000584483 NFIXQ14938 502 aa17.86■□□□□ 0.45
SMARCD2-211ENST00000584483 NUTM1Q86Y26 1132 aa17.86■□□□□ 0.45
SMARCD2-211ENST00000584483 UPF1Q92900 1129 aaKnown RBP eCLIP17.86■□□□□ 0.45
SMARCD2-211ENST00000584483 PA2G4Q9UQ80 394 aaKnown RBP17.86■□□□□ 0.45
SMARCD2-211ENST00000584483 HDAC5Q9UQL6 1122 aa17.86■□□□□ 0.45
SMARCD2-211ENST00000584483 CASZ1Q86V15 1759 aa17.86■□□□□ 0.45
SMARCD2-211ENST00000584483 MYH3P11055 1940 aa17.86■□□□□ 0.45
SMARCD2-211ENST00000584483 HMMRO75330 724 aa17.85■□□□□ 0.45
SMARCD2-211ENST00000584483 CSF1RP07333 972 aa17.85■□□□□ 0.45
SMARCD2-211ENST00000584483 TM4SF1P30408 202 aa17.85■□□□□ 0.45
SMARCD2-211ENST00000584483 LAMB2P55268 1798 aa17.85■□□□□ 0.45
SMARCD2-211ENST00000584483 NUCB1Q02818 461 aa17.85■□□□□ 0.45
SMARCD2-211ENST00000584483 GCC1Q96CN9 775 aa17.85■□□□□ 0.45
SMARCD2-211ENST00000584483 EXOC6BQ9Y2D4 811 aa17.85■□□□□ 0.45
SMARCD2-211ENST00000584483 HCLS1P14317 486 aaPredicted RBP17.84■□□□□ 0.45
SMARCD2-211ENST00000584483 PDE4AP27815 886 aa17.84■□□□□ 0.45
SMARCD2-211ENST00000584483 ERFEQ4G0M1 354 aa17.84■□□□□ 0.45
SMARCD2-211ENST00000584483 KLHDC4Q8TBB5 520 aa17.84■□□□□ 0.45
SMARCD2-211ENST00000584483 SETDB2Q96T68 719 aa17.84■□□□□ 0.45
SMARCD2-211ENST00000584483 SH3TC1Q8TE82 1336 aa17.83■□□□□ 0.44
SMARCD2-211ENST00000584483 TTLL11Q8NHH1 800 aa17.83■□□□□ 0.44
SMARCD2-211ENST00000584483 NOP58Q9Y2X3 529 aaKnown RBP17.83■□□□□ 0.44
SMARCD2-211ENST00000584483 SMARCA5O60264 1052 aaPredicted RBP17.82■□□□□ 0.44
SMARCD2-211ENST00000584483 PDE8AO60658 829 aa17.82■□□□□ 0.44
SMARCD2-211ENST00000584483 PTPN12Q05209 780 aaKnown RBP17.82■□□□□ 0.44
SMARCD2-211ENST00000584483 DDR1Q08345 913 aa17.82■□□□□ 0.44
SMARCD2-211ENST00000584483 ANKRD45Q5TZF3 282 aa17.82■□□□□ 0.44
SMARCD2-211ENST00000584483 C3orf67Q6ZVT6 689 aa17.82■□□□□ 0.44
SMARCD2-211ENST00000584483 CCDC24Q8N4L8 307 aa17.82■□□□□ 0.44
SMARCD2-211ENST00000584483 FLAD1Q8NFF5 587 aa17.82■□□□□ 0.44
SMARCD2-211ENST00000584483 PDGFDQ9GZP0 370 aaPredicted RBP17.82■□□□□ 0.44
SMARCD2-211ENST00000584483 STK32BQ9NY57 414 aa17.82■□□□□ 0.44
SMARCD2-211ENST00000584483 ABCC12Q96J65 1359 aa17.81■□□□□ 0.44
SMARCD2-211ENST00000584483 SURF6O75683 361 aaKnown RBP17.81■□□□□ 0.44
SMARCD2-211ENST00000584483 CTSWP56202 376 aa17.81■□□□□ 0.44
SMARCD2-211ENST00000584483 SLC10A5Q5PT55 438 aa17.81■□□□□ 0.44
SMARCD2-211ENST00000584483 CCDC85AQ96PX6 553 aaPredicted RBP17.81■□□□□ 0.44
SMARCD2-211ENST00000584483 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.81■□□□□ 0.44
SMARCD2-211ENST00000584483 COL4A1P02462 1669 aa17.8■□□□□ 0.44
SMARCD2-211ENST00000584483 APBB1O00213 710 aa17.8■□□□□ 0.44
SMARCD2-211ENST00000584483 MSH5O43196 834 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms