RNA–Protein interactions for RNA: ENST00000582040.1

CCDC57-214, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 330 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-214ENST00000582040 PROSER3Q2NL68 480 aa18.88■□□□□ 0.61
CCDC57-214ENST00000582040 CCDC146Q8IYE0 955 aa18.88■□□□□ 0.61
CCDC57-214ENST00000582040 PSMD1Q99460 953 aa18.88■□□□□ 0.61
CCDC57-214ENST00000582040 TAF1DQ9H5J8 278 aaPredicted RBP18.88■□□□□ 0.61
CCDC57-214ENST00000582040 BABAM1Q9NWV8 329 aa18.88■□□□□ 0.61
CCDC57-214ENST00000582040 COL4A5P29400 1685 aa18.88■□□□□ 0.61
CCDC57-214ENST00000582040 HOXA10P31260 410 aaPredicted RBP18.87■□□□□ 0.61
CCDC57-214ENST00000582040 PARP10Q53GL7 1025 aa18.87■□□□□ 0.61
CCDC57-214ENST00000582040 SLC51AQ86UW1 340 aa18.87■□□□□ 0.61
CCDC57-214ENST00000582040 LDHDQ86WU2 507 aa18.87■□□□□ 0.61
CCDC57-214ENST00000582040 ADAMTSL1Q8N6G6 1762 aa18.86■□□□□ 0.61
CCDC57-214ENST00000582040 NEUROD2Q15784 382 aa18.86■□□□□ 0.61
CCDC57-214ENST00000582040 CC2D2BQ6DHV5 1058 aa18.86■□□□□ 0.61
CCDC57-214ENST00000582040 C3orf67Q6ZVT6 689 aa18.86■□□□□ 0.61
CCDC57-214ENST00000582040 PPP1R42Q7Z4L9 355 aa18.86■□□□□ 0.61
CCDC57-214ENST00000582040 NECTIN2Q92692 538 aa18.86■□□□□ 0.61
CCDC57-214ENST00000582040 RNF123Q5XPI4 1314 aa18.85■□□□□ 0.61
CCDC57-214ENST00000582040 FZD9O00144 591 aa18.85■□□□□ 0.61
CCDC57-214ENST00000582040 PPEF1O14829 653 aaPredicted RBP18.85■□□□□ 0.61
CCDC57-214ENST00000582040 EAPPQ56P03 285 aaPredicted RBP18.85■□□□□ 0.61
CCDC57-214ENST00000582040 JDP2Q8WYK2 163 aa18.85■□□□□ 0.61
CCDC57-214ENST00000582040 RBM17Q96I25 401 aaKnown RBP18.85■□□□□ 0.61
CCDC57-214ENST00000582040 CRAMP1Q96RY5 1269 aa18.85■□□□□ 0.61
CCDC57-214ENST00000582040 CREBZFQ9NS37 354 aa18.85■□□□□ 0.61
CCDC57-214ENST00000582040 HACL1Q9UJ83 578 aa18.85■□□□□ 0.61
CCDC57-214ENST00000582040 LAMB2P55268 1798 aa18.84■□□□□ 0.61
CCDC57-214ENST00000582040 WDR43Q15061 677 aaKnown RBP eCLIP18.84■□□□□ 0.61
CCDC57-214ENST00000582040 PASKQ96RG2 1323 aa18.83■□□□□ 0.61
CCDC57-214ENST00000582040 TCERG1O14776 1098 aaKnown RBP18.83■□□□□ 0.6
CCDC57-214ENST00000582040 HSPA1AP0DMV8 641 aaKnown RBP18.83■□□□□ 0.6
CCDC57-214ENST00000582040 HSPA1BP0DMV9 641 aaKnown RBP18.83■□□□□ 0.6
CCDC57-214ENST00000582040 EPHX2P34913 555 aa18.83■□□□□ 0.6
CCDC57-214ENST00000582040 AIMP1Q12904 312 aaKnown RBP18.83■□□□□ 0.6
CCDC57-214ENST00000582040 KRT24Q2M2I5 525 aa18.83■□□□□ 0.6
CCDC57-214ENST00000582040 COL13A1Q5TAT6 717 aaPredicted RBP18.83■□□□□ 0.6
CCDC57-214ENST00000582040 XAGE3Q8WTP9 111 aa18.83■□□□□ 0.6
CCDC57-214ENST00000582040 UTP14AQ9BVJ6 771 aaKnown RBP18.83■□□□□ 0.6
CCDC57-214ENST00000582040 COPS6Q7L5N1 327 aa18.82■□□□□ 0.6
CCDC57-214ENST00000582040 GPC2Q8N158 579 aa18.82■□□□□ 0.6
CCDC57-214ENST00000582040 RUNDC1Q96C34 613 aa18.82■□□□□ 0.6
CCDC57-214ENST00000582040 NLRP3Q96P20 1036 aa18.82■□□□□ 0.6
CCDC57-214ENST00000582040 MKRN1Q9UHC7 482 aaKnown RBP18.82■□□□□ 0.6
CCDC57-214ENST00000582040 LTBP1Q14766 1721 aa18.81■□□□□ 0.6
CCDC57-214ENST00000582040 CHL1O00533 1208 aa18.81■□□□□ 0.6
CCDC57-214ENST00000582040 EIF6P56537 245 aaKnown RBP18.81■□□□□ 0.6
CCDC57-214ENST00000582040 HSP90AB3PQ58FF7 597 aa18.81■□□□□ 0.6
CCDC57-214ENST00000582040 LARGE2Q8N3Y3 721 aa18.81■□□□□ 0.6
CCDC57-214ENST00000582040 TRIM35Q9UPQ4 493 aa18.81■□□□□ 0.6
CCDC57-214ENST00000582040 CLEC11AQ9Y240 323 aa18.81■□□□□ 0.6
CCDC57-214ENST00000582040 LAS1LQ9Y4W2 734 aaKnown RBP18.81■□□□□ 0.6
CCDC57-214ENST00000582040 ABCC4O15439 1325 aa18.8■□□□□ 0.6
CCDC57-214ENST00000582040 GRIPAP1Q4V328 841 aa18.8■□□□□ 0.6
CCDC57-214ENST00000582040 NLRP10Q86W26 655 aa18.8■□□□□ 0.6
CCDC57-214ENST00000582040 DDX21Q9NR30 783 aaKnown RBP eCLIP18.8■□□□□ 0.6
CCDC57-214ENST00000582040 GJA3Q9Y6H8 435 aa18.8■□□□□ 0.6
CCDC57-214ENST00000582040 PCNTO95613 3336 aa18.8■□□□□ 0.6
CCDC57-214ENST00000582040 SLC10A5Q5PT55 438 aa18.79■□□□□ 0.6
CCDC57-214ENST00000582040 PNMA8AQ86V59 439 aaPredicted RBP18.79■□□□□ 0.6
CCDC57-214ENST00000582040 CHPF2Q9P2E5 772 aa18.79■□□□□ 0.6
CCDC57-214ENST00000582040 CNTNAP1P78357 1384 aa18.79■□□□□ 0.6
CCDC57-214ENST00000582040 ITGBL1O95965 494 aaPredicted RBP18.78■□□□□ 0.6
CCDC57-214ENST00000582040 HDGFL1Q5TGJ6 251 aa18.78■□□□□ 0.6
CCDC57-214ENST00000582040 ADAMTS8Q9UP79 889 aa18.78■□□□□ 0.6
CCDC57-214ENST00000582040 ATP6V0A2Q9Y487 856 aa18.78■□□□□ 0.6
CCDC57-214ENST00000582040 PPIP5K2O43314 1243 aa18.77■□□□□ 0.6
CCDC57-214ENST00000582040 HCLS1P14317 486 aaPredicted RBP18.77■□□□□ 0.6
CCDC57-214ENST00000582040 TCIRG1Q13488 830 aa18.77■□□□□ 0.6
CCDC57-214ENST00000582040 NIM1KQ8IY84 436 aa18.77■□□□□ 0.6
CCDC57-214ENST00000582040 TMX4Q9H1E5 349 aaPredicted RBP18.77■□□□□ 0.6
CCDC57-214ENST00000582040 TRMT112Q9UI30 125 aaKnown RBP18.77■□□□□ 0.6
CCDC57-214ENST00000582040 LMOD1P29536 600 aaPredicted RBP18.76■□□□□ 0.59
CCDC57-214ENST00000582040 AOC3Q16853 763 aa18.76■□□□□ 0.59
CCDC57-214ENST00000582040 MAP1SQ66K74 1059 aaPredicted RBP18.76■□□□□ 0.59
CCDC57-214ENST00000582040 ZNF428Q96B54 188 aa18.76■□□□□ 0.59
CCDC57-214ENST00000582040 DDX60Q8IY21 1712 aaKnown RBP18.76■□□□□ 0.59
CCDC57-214ENST00000582040 SH3TC1Q8TE82 1336 aa18.75■□□□□ 0.59
CCDC57-214ENST00000582040 TMEM88BA6NKF7 163 aa18.75■□□□□ 0.59
CCDC57-214ENST00000582040 HOXB7P09629 217 aa18.75■□□□□ 0.59
CCDC57-214ENST00000582040 SCNN1DP51172 638 aa18.75■□□□□ 0.59
CCDC57-214ENST00000582040 TNS4Q8IZW8 715 aa18.75■□□□□ 0.59
CCDC57-214ENST00000582040 LRRC37AA6NMS7 1700 aa18.74■□□□□ 0.59
CCDC57-214ENST00000582040 CNTROBQ8N137 903 aa18.74■□□□□ 0.59
CCDC57-214ENST00000582040 PRKRIP1Q9H875 184 aaPredicted RBP18.74■□□□□ 0.59
CCDC57-214ENST00000582040 DUOX1Q9NRD9 1551 aa18.73■□□□□ 0.59
CCDC57-214ENST00000582040 EPS15P42566 896 aa18.73■□□□□ 0.59
CCDC57-214ENST00000582040 DPP8Q6V1X1 898 aaPredicted RBP18.73■□□□□ 0.59
CCDC57-214ENST00000582040 DDX46Q7L014 1031 aaKnown RBP18.73■□□□□ 0.59
CCDC57-214ENST00000582040 SUPT20HQ8NEM7 779 aa18.73■□□□□ 0.59
CCDC57-214ENST00000582040 PLBD2Q8NHP8 589 aa18.73■□□□□ 0.59
CCDC57-214ENST00000582040 CFAP44Q96MT7 982 aa18.73■□□□□ 0.59
CCDC57-214ENST00000582040 TAF1P21675 1872 aa18.73■□□□□ 0.59
CCDC57-214ENST00000582040 BBOX1O75936 387 aa18.72■□□□□ 0.59
CCDC57-214ENST00000582040 GRAPQ13588 217 aa18.72■□□□□ 0.59
CCDC57-214ENST00000582040 SP8Q8IXZ3 490 aa18.72■□□□□ 0.59
CCDC57-214ENST00000582040 GRAPLQ8TC17 118 aaPredicted RBP18.72■□□□□ 0.59
CCDC57-214ENST00000582040 RTFDC1Q9BY42 306 aaPredicted RBP18.72■□□□□ 0.59
CCDC57-214ENST00000582040 MBIPQ9NS73 344 aa18.72■□□□□ 0.59
CCDC57-214ENST00000582040 DBF4Q9UBU7 674 aaPredicted RBP18.72■□□□□ 0.59
CCDC57-214ENST00000582040 DUSP27Q5VZP5 1158 aa18.71■□□□□ 0.59
CCDC57-214ENST00000582040 MPNDQ8N594 471 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms