RNA–Protein interactions for RNA: ENST00000581497.1

SRSF1-203, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 3

Gene SRSF1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-203ENST00000581497 JUNDP17535 347 aa10.94□□□□□ -0.66
SRSF1-203ENST00000581497 TMF1P82094 1093 aa10.94□□□□□ -0.66
SRSF1-203ENST00000581497 MDM2Q00987 491 aaPredicted RBP10.94□□□□□ -0.66
SRSF1-203ENST00000581497 COL18A1P39060 1754 aa10.93□□□□□ -0.66
SRSF1-203ENST00000581497 CLSPNQ9HAW4 1339 aa10.93□□□□□ -0.66
SRSF1-203ENST00000581497 NBPF14Q5TI25 921 aa10.93□□□□□ -0.66
SRSF1-203ENST00000581497 NLRP2Q9NX02 1062 aa10.93□□□□□ -0.66
SRSF1-203ENST00000581497 MON2Q7Z3U7 1717 aa10.92□□□□□ -0.66
SRSF1-203ENST00000581497 PARP4Q9UKK3 1724 aaKnown RBP10.92□□□□□ -0.66
SRSF1-203ENST00000581497 USP47Q96K76 1375 aa10.92□□□□□ -0.66
SRSF1-203ENST00000581497 PLSCR1O15162 318 aa10.92□□□□□ -0.66
SRSF1-203ENST00000581497 GUCA2AQ02747 115 aa10.92□□□□□ -0.66
SRSF1-203ENST00000581497 CDCA8Q53HL2 280 aa10.92□□□□□ -0.66
SRSF1-203ENST00000581497 MARCH10Q8NA82 808 aaPredicted RBP10.92□□□□□ -0.66
SRSF1-203ENST00000581497 COG3Q96JB2 828 aa10.92□□□□□ -0.66
SRSF1-203ENST00000581497 TNS1Q9HBL0 1735 aaKnown RBP10.92□□□□□ -0.66
SRSF1-203ENST00000581497 BCL9O00512 1426 aa10.92□□□□□ -0.66
SRSF1-203ENST00000581497 IRF6O14896 467 aa10.91□□□□□ -0.66
SRSF1-203ENST00000581497 ANKRD24Q8TF21 1146 aa10.91□□□□□ -0.66
SRSF1-203ENST00000581497 SLC16A10Q8TF71 515 aa10.91□□□□□ -0.66
SRSF1-203ENST00000581497 ANKRD36BQ8N2N9 1353 aa10.9□□□□□ -0.66
SRSF1-203ENST00000581497 IL2RBP14784 551 aa10.9□□□□□ -0.66
SRSF1-203ENST00000581497 IP6K1Q92551 441 aa10.9□□□□□ -0.66
SRSF1-203ENST00000581497 PCGF6Q9BYE7 350 aa10.9□□□□□ -0.66
SRSF1-203ENST00000581497 NXF1Q9UBU9 619 aaKnown RBP10.9□□□□□ -0.66
SRSF1-203ENST00000581497 LRRC37A3O60309 1634 aa10.89□□□□□ -0.67
SRSF1-203ENST00000581497 EHBP1Q8NDI1 1231 aa10.89□□□□□ -0.67
SRSF1-203ENST00000581497 SYMPKQ92797 1274 aaKnown RBP10.89□□□□□ -0.67
SRSF1-203ENST00000581497 NUDT12Q9BQG2 462 aa10.89□□□□□ -0.67
SRSF1-203ENST00000581497 USP54Q70EL1 1684 aa10.89□□□□□ -0.67
SRSF1-203ENST00000581497 SRCAPQ6ZRS2 3230 aa10.88□□□□□ -0.67
SRSF1-203ENST00000581497 LRP5O75197 1615 aa10.88□□□□□ -0.67
SRSF1-203ENST00000581497 SIAH2O43255 324 aa10.88□□□□□ -0.67
SRSF1-203ENST00000581497 AMPHP49418 695 aa10.88□□□□□ -0.67
SRSF1-203ENST00000581497 PLCB2Q00722 1185 aa10.88□□□□□ -0.67
SRSF1-203ENST00000581497 TNS2Q63HR2 1409 aa10.88□□□□□ -0.67
SRSF1-203ENST00000581497 MAP3K19Q56UN5 1328 aa10.87□□□□□ -0.67
SRSF1-203ENST00000581497 PEAK1Q9H792 1746 aa10.87□□□□□ -0.67
SRSF1-203ENST00000581497 FYB1O15117 783 aa10.87□□□□□ -0.67
SRSF1-203ENST00000581497 BMP1P13497 986 aa10.87□□□□□ -0.67
SRSF1-203ENST00000581497 PTCRAQ6ISU1 281 aaPredicted RBP10.87□□□□□ -0.67
SRSF1-203ENST00000581497 PTF1AQ7RTS3 328 aa10.87□□□□□ -0.67
SRSF1-203ENST00000581497 RETREG3Q86VR2 466 aa10.87□□□□□ -0.67
SRSF1-203ENST00000581497 LTV1Q96GA3 475 aaPredicted RBP10.87□□□□□ -0.67
SRSF1-203ENST00000581497 WASF2Q9Y6W5 498 aa10.87□□□□□ -0.67
SRSF1-203ENST00000581497 CAPN5O15484 640 aaPredicted RBP10.86□□□□□ -0.67
SRSF1-203ENST00000581497 HOXC9P31274 260 aa10.86□□□□□ -0.67
SRSF1-203ENST00000581497 TRIM46Q7Z4K8 759 aa10.86□□□□□ -0.67
SRSF1-203ENST00000581497 GGNBP2Q9H3C7 697 aa10.86□□□□□ -0.67
SRSF1-203ENST00000581497 FAM181BA6NEQ2 426 aa10.85□□□□□ -0.67
SRSF1-203ENST00000581497 KCNQ2O43526 872 aa10.84□□□□□ -0.67
SRSF1-203ENST00000581497 FBLN1P23142 703 aa10.84□□□□□ -0.67
SRSF1-203ENST00000581497 GMPRP36959 345 aa10.84□□□□□ -0.67
SRSF1-203ENST00000581497 RRS1Q15050 365 aaKnown RBP10.84□□□□□ -0.67
SRSF1-203ENST00000581497 TXNRD1Q16881 649 aa10.84□□□□□ -0.67
SRSF1-203ENST00000581497 NPAS3Q8IXF0 933 aa10.84□□□□□ -0.67
SRSF1-203ENST00000581497 CCDC102AQ96A19 550 aa10.84□□□□□ -0.67
SRSF1-203ENST00000581497 ACSBG1Q96GR2 724 aa10.84□□□□□ -0.67
SRSF1-203ENST00000581497 SPON1Q9HCB6 807 aa10.84□□□□□ -0.67
SRSF1-203ENST00000581497 GPCPD1Q9NPB8 672 aa10.84□□□□□ -0.67
SRSF1-203ENST00000581497 FAM217BQ9NTX9 383 aaPredicted RBP10.84□□□□□ -0.67
SRSF1-203ENST00000581497 RTL1A6NKG5 1358 aa10.84□□□□□ -0.67
SRSF1-203ENST00000581497 RREB1Q92766 1687 aa10.84□□□□□ -0.67
SRSF1-203ENST00000581497 RGPD5Q99666 1765 aa10.83□□□□□ -0.68
SRSF1-203ENST00000581497 NUTM1Q86Y26 1132 aa10.83□□□□□ -0.68
SRSF1-203ENST00000581497 IRF7Q92985 503 aa10.83□□□□□ -0.68
SRSF1-203ENST00000581497 WNK3Q9BYP7 1800 aa10.83□□□□□ -0.68
SRSF1-203ENST00000581497 NUP188Q5SRE5 1749 aa10.82□□□□□ -0.68
SRSF1-203ENST00000581497 CLCN1P35523 988 aa10.82□□□□□ -0.68
SRSF1-203ENST00000581497 SH3BP2P78314 561 aa10.82□□□□□ -0.68
SRSF1-203ENST00000581497 DDX54Q8TDD1 881 aaKnown RBP10.82□□□□□ -0.68
SRSF1-203ENST00000581497 STK32BQ9NY57 414 aa10.82□□□□□ -0.68
SRSF1-203ENST00000581497 LTN1O94822 1766 aa10.81□□□□□ -0.68
SRSF1-203ENST00000581497 ZSCAN1Q8NBB4 408 aa10.81□□□□□ -0.68
SRSF1-203ENST00000581497 CCER1Q8TC90 406 aaPredicted RBP10.81□□□□□ -0.68
SRSF1-203ENST00000581497 CARD14Q9BXL6 1004 aa10.81□□□□□ -0.68
SRSF1-203ENST00000581497 PPP1R1BQ9UD71 204 aaPredicted RBP10.81□□□□□ -0.68
SRSF1-203ENST00000581497 SMG6Q86US8 1419 aaKnown RBP10.81□□□□□ -0.68
SRSF1-203ENST00000581497 RGPD3A6NKT7 1758 aaPredicted RBP10.8□□□□□ -0.68
SRSF1-203ENST00000581497 RGPD4Q7Z3J3 1758 aa10.8□□□□□ -0.68
SRSF1-203ENST00000581497 KIF24Q5T7B8 1368 aa10.8□□□□□ -0.68
SRSF1-203ENST00000581497 TULP1O00294 542 aaPredicted RBP10.8□□□□□ -0.68
SRSF1-203ENST00000581497 CCNYL3P0C7X3 344 aa10.8□□□□□ -0.68
SRSF1-203ENST00000581497 MS4A1P11836 297 aa10.8□□□□□ -0.68
SRSF1-203ENST00000581497 EIF4G2P78344 907 aaKnown RBP eCLIP10.8□□□□□ -0.68
SRSF1-203ENST00000581497 SLC15A2Q16348 729 aa10.8□□□□□ -0.68
SRSF1-203ENST00000581497 NBPF6Q5VWK0 638 aa10.8□□□□□ -0.68
SRSF1-203ENST00000581497 ZCRB1Q8TBF4 217 aaKnown RBP10.8□□□□□ -0.68
SRSF1-203ENST00000581497 RAPGEF4Q8WZA2 1011 aa10.8□□□□□ -0.68
SRSF1-203ENST00000581497 NBPF4Q96M43 638 aa10.8□□□□□ -0.68
SRSF1-203ENST00000581497 NSD3Q9BZ95 1437 aa10.8□□□□□ -0.68
SRSF1-203ENST00000581497 CGNL1Q0VF96 1302 aa10.8□□□□□ -0.68
SRSF1-203ENST00000581497 SBF2Q86WG5 1849 aa10.79□□□□□ -0.68
SRSF1-203ENST00000581497 INSRP06213 1382 aa10.79□□□□□ -0.68
SRSF1-203ENST00000581497 FLT4P35916 1363 aa10.79□□□□□ -0.68
SRSF1-203ENST00000581497 C6orf229H3BNL8 230 aa10.79□□□□□ -0.68
SRSF1-203ENST00000581497 FDX1P10109 184 aa10.79□□□□□ -0.68
SRSF1-203ENST00000581497 VEGFBP49765 207 aa10.79□□□□□ -0.68
SRSF1-203ENST00000581497 HSP90AB2PQ58FF8 381 aa10.79□□□□□ -0.68
SRSF1-203ENST00000581497 POLR3GLQ9BT43 218 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms