RNA–Protein interactions for RNA: ENST00000581487.1

CMTM4-205, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

Gene CMTM4, Length 7,026 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-205ENST00000581487 KRT32Q14532 448 aa8.55□□□□□ -1.04
CMTM4-205ENST00000581487 JMYQ8N9B5 988 aa8.55□□□□□ -1.04
CMTM4-205ENST00000581487 CCDC113Q9H0I3 377 aa8.55□□□□□ -1.04
CMTM4-205ENST00000581487 NOS1P29475 1434 aa8.55□□□□□ -1.04
CMTM4-205ENST00000581487 THOC2Q8NI27 1593 aaKnown RBP8.55□□□□□ -1.04
CMTM4-205ENST00000581487 RAB11FIP3O75154 756 aa8.55□□□□□ -1.04
CMTM4-205ENST00000581487 UVSSAQ2YD98 709 aa8.55□□□□□ -1.04
CMTM4-205ENST00000581487 CFAP36Q96G28 342 aa8.55□□□□□ -1.04
CMTM4-205ENST00000581487 TMX3Q96JJ7 454 aa8.55□□□□□ -1.04
CMTM4-205ENST00000581487 CCDC61Q9Y6R9 512 aa8.55□□□□□ -1.04
CMTM4-205ENST00000581487 ATXN8OSP0DMR3 200 aa8.55□□□□□ -1.04
CMTM4-205ENST00000581487 PDCD2Q16342 344 aaPredicted RBP8.55□□□□□ -1.04
CMTM4-205ENST00000581487 STMN2Q93045 179 aa8.55□□□□□ -1.04
CMTM4-205ENST00000581487 ATP2A3Q93084 1043 aa8.55□□□□□ -1.04
CMTM4-205ENST00000581487 RAPGEF3O95398 923 aa8.54□□□□□ -1.04
CMTM4-205ENST00000581487 ADCY5O95622 1261 aa8.54□□□□□ -1.04
CMTM4-205ENST00000581487 DDX54Q8TDD1 881 aaKnown RBP8.54□□□□□ -1.04
CMTM4-205ENST00000581487 ANKRD36BQ8N2N9 1353 aa8.54□□□□□ -1.04
CMTM4-205ENST00000581487 GRIN2AQ12879 1464 aa8.54□□□□□ -1.04
CMTM4-205ENST00000581487 FAM177BA6PVY3 158 aa8.54□□□□□ -1.04
CMTM4-205ENST00000581487 CUL4BQ13620 913 aa8.54□□□□□ -1.04
CMTM4-205ENST00000581487 C6orf163Q5TEZ5 329 aa8.54□□□□□ -1.04
CMTM4-205ENST00000581487 PPP4R3AQ6IN85 833 aa8.54□□□□□ -1.04
CMTM4-205ENST00000581487 HSPA4P34932 840 aa8.54□□□□□ -1.04
CMTM4-205ENST00000581487 HOOK3Q86VS8 718 aa8.54□□□□□ -1.04
CMTM4-205ENST00000581487 RNF168Q8IYW5 571 aaPredicted RBP8.54□□□□□ -1.04
CMTM4-205ENST00000581487 OTUD6BQ8N6M0 293 aa8.54□□□□□ -1.04
CMTM4-205ENST00000581487 TANGO6Q9C0B7 1094 aa8.54□□□□□ -1.04
CMTM4-205ENST00000581487 SDSP20132 328 aa8.54□□□□□ -1.04
CMTM4-205ENST00000581487 DDX46Q7L014 1031 aaKnown RBP8.54□□□□□ -1.04
CMTM4-205ENST00000581487 WAPLQ7Z5K2 1190 aa8.54□□□□□ -1.04
CMTM4-205ENST00000581487 ZNF830Q96NB3 372 aaPredicted RBP8.54□□□□□ -1.04
CMTM4-205ENST00000581487 VCXQ9H320 206 aa8.54□□□□□ -1.04
CMTM4-205ENST00000581487 XBP1P17861 261 aa8.54□□□□□ -1.04
CMTM4-205ENST00000581487 MCM3P25205 808 aa8.54□□□□□ -1.04
CMTM4-205ENST00000581487 SREK1Q8WXA9 508 aaKnown RBP8.54□□□□□ -1.04
CMTM4-205ENST00000581487 FERMT1Q9BQL6 677 aa8.54□□□□□ -1.04
CMTM4-205ENST00000581487 PAXBP1Q9Y5B6 917 aa8.54□□□□□ -1.04
CMTM4-205ENST00000581487 RSRC1Q96IZ7 334 aaKnown RBP8.54□□□□□ -1.04
CMTM4-205ENST00000581487 ZMAT2Q96NC0 199 aaKnown RBP8.54□□□□□ -1.04
CMTM4-205ENST00000581487 ZKSCAN5Q9Y2L8 839 aa8.54□□□□□ -1.04
CMTM4-205ENST00000581487 ASXL1Q8IXJ9 1541 aa8.54□□□□□ -1.04
CMTM4-205ENST00000581487 FAM83GA6ND36 823 aa8.53□□□□□ -1.04
CMTM4-205ENST00000581487 STX6O43752 255 aa8.53□□□□□ -1.04
CMTM4-205ENST00000581487 PIP4K2BP78356 416 aa8.53□□□□□ -1.04
CMTM4-205ENST00000581487 CKAP2LQ8IYA6 745 aa8.53□□□□□ -1.04
CMTM4-205ENST00000581487 CEP120Q8N960 986 aa8.53□□□□□ -1.04
CMTM4-205ENST00000581487 ATRIPQ8WXE1 791 aa8.53□□□□□ -1.04
CMTM4-205ENST00000581487 GIMAP4Q9NUV9 329 aa8.53□□□□□ -1.04
CMTM4-205ENST00000581487 ATP2B2Q01814 1243 aa8.53□□□□□ -1.04
CMTM4-205ENST00000581487 MAP7D1Q3KQU3 841 aa8.53□□□□□ -1.04
CMTM4-205ENST00000581487 MRPL50Q8N5N7 158 aaKnown RBP8.53□□□□□ -1.04
CMTM4-205ENST00000581487 ZC4H2Q9NQZ6 224 aa8.53□□□□□ -1.04
CMTM4-205ENST00000581487 PTPRCP08575 1304 aa8.53□□□□□ -1.04
CMTM4-205ENST00000581487 CAPN2P17655 700 aa8.53□□□□□ -1.04
CMTM4-205ENST00000581487 TSHZ3Q63HK5 1081 aa8.53□□□□□ -1.04
CMTM4-205ENST00000581487 MSL1Q68DK7 614 aa8.53□□□□□ -1.04
CMTM4-205ENST00000581487 UHRF1BP1Q6BDS2 1440 aa8.53□□□□□ -1.04
CMTM4-205ENST00000581487 TEX14Q8IWB6 1497 aa8.53□□□□□ -1.04
CMTM4-205ENST00000581487 CLNS1AP54105 237 aaKnown RBP8.53□□□□□ -1.04
CMTM4-205ENST00000581487 RPAINQ86UA6 219 aa8.53□□□□□ -1.04
CMTM4-205ENST00000581487 ZBTB40Q9NUA8 1239 aa8.53□□□□□ -1.04
CMTM4-205ENST00000581487 CLIP2Q9UDT6 1046 aa8.53□□□□□ -1.04
CMTM4-205ENST00000581487 GNAT3A8MTJ3 354 aa8.52□□□□□ -1.04
CMTM4-205ENST00000581487 ZNF622Q969S3 477 aaKnown RBP eCLIP8.52□□□□□ -1.04
CMTM4-205ENST00000581487 RAI14Q9P0K7 980 aa8.52□□□□□ -1.04
CMTM4-205ENST00000581487 INSRP06213 1382 aa8.52□□□□□ -1.04
CMTM4-205ENST00000581487 ZBTB24O43167 697 aaPredicted RBP8.52□□□□□ -1.05
CMTM4-205ENST00000581487 ARHGAP25P42331 645 aa8.52□□□□□ -1.05
CMTM4-205ENST00000581487 LARP6Q9BRS8 491 aaKnown RBP8.52□□□□□ -1.05
CMTM4-205ENST00000581487 SPC25Q9HBM1 224 aa8.52□□□□□ -1.05
CMTM4-205ENST00000581487 TBC1D2BQ9UPU7 963 aa8.52□□□□□ -1.05
CMTM4-205ENST00000581487 DMRT2Q9Y5R5 561 aa8.52□□□□□ -1.05
CMTM4-205ENST00000581487 NUP153P49790 1475 aaKnown RBP8.52□□□□□ -1.05
CMTM4-205ENST00000581487 KCNA4P22459 653 aa8.52□□□□□ -1.05
CMTM4-205ENST00000581487 PDCD7Q8N8D1 485 aaKnown RBP8.52□□□□□ -1.05
CMTM4-205ENST00000581487 CARD14Q9BXL6 1004 aa8.52□□□□□ -1.05
CMTM4-205ENST00000581487 HCLS1P14317 486 aaPredicted RBP8.52□□□□□ -1.05
CMTM4-205ENST00000581487 GNL1P36915 607 aaPredicted RBP8.52□□□□□ -1.05
CMTM4-205ENST00000581487 ANKRD44Q8N8A2 993 aa8.52□□□□□ -1.05
CMTM4-205ENST00000581487 KIF4AO95239 1232 aa8.52□□□□□ -1.05
CMTM4-205ENST00000581487 GJB2P29033 226 aa8.52□□□□□ -1.05
CMTM4-205ENST00000581487 SNX16P57768 344 aa8.52□□□□□ -1.05
CMTM4-205ENST00000581487 DDX19AQ9NUU7 478 aaKnown RBP8.52□□□□□ -1.05
CMTM4-205ENST00000581487 SPG7Q9UQ90 795 aa8.52□□□□□ -1.05
CMTM4-205ENST00000581487 VIMP08670 466 aaKnown RBP8.52□□□□□ -1.05
CMTM4-205ENST00000581487 PRIM1P49642 420 aaKnown RBP8.52□□□□□ -1.05
CMTM4-205ENST00000581487 NOLC1Q14978 699 aaKnown RBP eCLIP8.52□□□□□ -1.05
CMTM4-205ENST00000581487 HS1BP3Q53T59 392 aa8.52□□□□□ -1.05
CMTM4-205ENST00000581487 CCDC158Q5M9N0 1113 aa8.52□□□□□ -1.05
CMTM4-205ENST00000581487 CCDC150Q8NCX0 1101 aa8.52□□□□□ -1.05
CMTM4-205ENST00000581487 FAM135AQ9P2D6 1515 aa8.51□□□□□ -1.05
CMTM4-205ENST00000581487 PZPP20742 1482 aa8.51□□□□□ -1.05
CMTM4-205ENST00000581487 NFKBIL1Q9UBC1 381 aaPredicted RBP8.51□□□□□ -1.05
CMTM4-205ENST00000581487 A0A1B0GUA9 196 aa8.51□□□□□ -1.05
CMTM4-205ENST00000581487 SFPQP23246 707 aaKnown RBP eCLIP8.51□□□□□ -1.05
CMTM4-205ENST00000581487 MAP2K2P36507 400 aa8.51□□□□□ -1.05
CMTM4-205ENST00000581487 SETDB1Q15047 1291 aa8.51□□□□□ -1.05
CMTM4-205ENST00000581487 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.51□□□□□ -1.05
CMTM4-205ENST00000581487 PDE1AP54750 535 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms