RNA–Protein interactions for RNA: ENST00000581003.5

CBX1-206, Transcript of chromobox 1, humanhuman

TSL 3

Gene CBX1, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-206ENST00000581003 NMRK2Q9NPI5 230 aa16.31■□□□□ 0.2
CBX1-206ENST00000581003 RIC1Q4ADV7 1423 aa16.3■□□□□ 0.2
CBX1-206ENST00000581003 CRY2Q49AN0 593 aa16.3■□□□□ 0.2
CBX1-206ENST00000581003 CNKSR1Q969H4 720 aa16.3■□□□□ 0.2
CBX1-206ENST00000581003 FER1L6Q2WGJ9 1857 aa16.3■□□□□ 0.2
CBX1-206ENST00000581003 COL4A1P02462 1669 aa16.3■□□□□ 0.2
CBX1-206ENST00000581003 LAMB2P55268 1798 aa16.29■□□□□ 0.2
CBX1-206ENST00000581003 HCLS1P14317 486 aaPredicted RBP16.29■□□□□ 0.2
CBX1-206ENST00000581003 C1QTNF8P60827 252 aa16.29■□□□□ 0.2
CBX1-206ENST00000581003 TCIRG1Q13488 830 aa16.29■□□□□ 0.2
CBX1-206ENST00000581003 PLBD2Q8NHP8 589 aa16.29■□□□□ 0.2
CBX1-206ENST00000581003 UTP14AQ9BVJ6 771 aaKnown RBP16.29■□□□□ 0.2
CBX1-206ENST00000581003 PDZRN3Q9UPQ7 1066 aa16.29■□□□□ 0.2
CBX1-206ENST00000581003 KIF3CO14782 793 aa16.28■□□□□ 0.2
CBX1-206ENST00000581003 LMNB1P20700 586 aa16.28■□□□□ 0.2
CBX1-206ENST00000581003 PARP10Q53GL7 1025 aa16.28■□□□□ 0.2
CBX1-206ENST00000581003 RTL5Q5HYW3 569 aaPredicted RBP16.28■□□□□ 0.2
CBX1-206ENST00000581003 ANKRD13DQ6ZTN6 518 aa16.28■□□□□ 0.2
CBX1-206ENST00000581003 HYPKQ9NX55 129 aa16.28■□□□□ 0.2
CBX1-206ENST00000581003 SNED1Q8TER0 1413 aa16.28■□□□□ 0.2
CBX1-206ENST00000581003 G2E3Q7L622 706 aa16.27■□□□□ 0.2
CBX1-206ENST00000581003 PPP1R42Q7Z4L9 355 aa16.27■□□□□ 0.2
CBX1-206ENST00000581003 ISCA1Q9BUE6 129 aa16.27■□□□□ 0.2
CBX1-206ENST00000581003 DDX60Q8IY21 1712 aaKnown RBP16.27■□□□□ 0.19
CBX1-206ENST00000581003 IL16Q14005 1332 aa16.26■□□□□ 0.19
CBX1-206ENST00000581003 TWISTNBQ3B726 338 aaPredicted RBP16.26■□□□□ 0.19
CBX1-206ENST00000581003 TAOK3Q9H2K8 898 aa16.26■□□□□ 0.19
CBX1-206ENST00000581003 TRMT112Q9UI30 125 aaKnown RBP16.26■□□□□ 0.19
CBX1-206ENST00000581003 CCDC88AQ3V6T2 1871 aa16.25■□□□□ 0.19
CBX1-206ENST00000581003 COL4A5P29400 1685 aa16.25■□□□□ 0.19
CBX1-206ENST00000581003 HSP90AB3PQ58FF7 597 aa16.25■□□□□ 0.19
CBX1-206ENST00000581003 JARID2Q92833 1246 aaPredicted RBP16.25■□□□□ 0.19
CBX1-206ENST00000581003 RPGRQ92834 1020 aaKnown RBP16.25■□□□□ 0.19
CBX1-206ENST00000581003 FAM89AQ96GI7 184 aa16.25■□□□□ 0.19
CBX1-206ENST00000581003 HOXA10P31260 410 aaPredicted RBP16.24■□□□□ 0.19
CBX1-206ENST00000581003 EXOSC9Q06265 439 aaKnown RBP16.24■□□□□ 0.19
CBX1-206ENST00000581003 CCDC93Q567U6 631 aa16.24■□□□□ 0.19
CBX1-206ENST00000581003 CCDC30Q5VVM6 783 aa16.24■□□□□ 0.19
CBX1-206ENST00000581003 RIC3Q7Z5B4 369 aa16.24■□□□□ 0.19
CBX1-206ENST00000581003 MYD88Q99836 296 aa16.24■□□□□ 0.19
CBX1-206ENST00000581003 ZNF277Q9NRM2 450 aaPredicted RBP16.24■□□□□ 0.19
CBX1-206ENST00000581003 ABCC4O15439 1325 aa16.23■□□□□ 0.19
CBX1-206ENST00000581003 SH3TC1Q8TE82 1336 aa16.23■□□□□ 0.19
CBX1-206ENST00000581003 GOLGA2Q08379 1002 aa16.23■□□□□ 0.19
CBX1-206ENST00000581003 NCBP3Q53F19 620 aaKnown RBP16.23■□□□□ 0.19
CBX1-206ENST00000581003 SLC10A5Q5PT55 438 aa16.23■□□□□ 0.19
CBX1-206ENST00000581003 WDR63Q8IWG1 891 aa16.23■□□□□ 0.19
CBX1-206ENST00000581003 ZNF521Q96K83 1311 aa16.22■□□□□ 0.19
CBX1-206ENST00000581003 LTBP3Q9NS15 1303 aa16.22■□□□□ 0.19
CBX1-206ENST00000581003 PPEF1O14829 653 aaPredicted RBP16.22■□□□□ 0.19
CBX1-206ENST00000581003 RRAGCQ9HB90 399 aa16.22■□□□□ 0.19
CBX1-206ENST00000581003 TAF1P21675 1872 aa16.22■□□□□ 0.19
CBX1-206ENST00000581003 ALDH1B1P30837 517 aa16.21■□□□□ 0.19
CBX1-206ENST00000581003 NLRP3Q96P20 1036 aa16.21■□□□□ 0.19
CBX1-206ENST00000581003 MAP3K2Q9Y2U5 619 aa16.21■□□□□ 0.19
CBX1-206ENST00000581003 PI4KAP2A4QPH2 592 aa16.2■□□□□ 0.18
CBX1-206ENST00000581003 VAMP4O75379 141 aa16.2■□□□□ 0.18
CBX1-206ENST00000581003 FKBP4Q02790 459 aaKnown RBP eCLIP16.2■□□□□ 0.18
CBX1-206ENST00000581003 PI4KAP1Q8N8J0 262 aa16.2■□□□□ 0.18
CBX1-206ENST00000581003 RBM17Q96I25 401 aaKnown RBP16.2■□□□□ 0.18
CBX1-206ENST00000581003 CRAMP1Q96RY5 1269 aa16.2■□□□□ 0.18
CBX1-206ENST00000581003 RNF123Q5XPI4 1314 aa16.19■□□□□ 0.18
CBX1-206ENST00000581003 ZNF541Q9H0D2 1346 aa16.19■□□□□ 0.18
CBX1-206ENST00000581003 SLC4A2P04920 1241 aa16.19■□□□□ 0.18
CBX1-206ENST00000581003 IGKV5-2P06315 115 aa16.19■□□□□ 0.18
CBX1-206ENST00000581003 SOGA3Q5TF21 947 aa16.19■□□□□ 0.18
CBX1-206ENST00000581003 METTL22Q9BUU2 404 aaPredicted RBP16.19■□□□□ 0.18
CBX1-206ENST00000581003 DICER1Q9UPY3 1922 aaKnown RBP16.19■□□□□ 0.18
CBX1-206ENST00000581003 KDM2BQ8NHM5 1336 aa16.19■□□□□ 0.18
CBX1-206ENST00000581003 GLTPD2A6NH11 291 aa16.18■□□□□ 0.18
CBX1-206ENST00000581003 CWF19L2Q2TBE0 894 aaKnown RBP16.18■□□□□ 0.18
CBX1-206ENST00000581003 STK31Q9BXU1 1019 aa16.18■□□□□ 0.18
CBX1-206ENST00000581003 DUOX1Q9NRD9 1551 aa16.17■□□□□ 0.18
CBX1-206ENST00000581003 POTECB2RU33 542 aa16.17■□□□□ 0.18
CBX1-206ENST00000581003 IRS4O14654 1257 aaPredicted RBP16.17■□□□□ 0.18
CBX1-206ENST00000581003 DDNO94850 711 aaPredicted RBP16.17■□□□□ 0.18
CBX1-206ENST00000581003 TRIM28Q13263 835 aaKnown RBP16.17■□□□□ 0.18
CBX1-206ENST00000581003 KSR2Q6VAB6 950 aa16.17■□□□□ 0.18
CBX1-206ENST00000581003 CELF1Q92879 486 aaKnown RBP16.17■□□□□ 0.18
CBX1-206ENST00000581003 CCDC85AQ96PX6 553 aaPredicted RBP16.17■□□□□ 0.18
CBX1-206ENST00000581003 ZC3H4Q9UPT8 1303 aaKnown RBP16.17■□□□□ 0.18
CBX1-206ENST00000581003 IARSP41252 1262 aaKnown RBP16.16■□□□□ 0.18
CBX1-206ENST00000581003 FLIIQ13045 1269 aa16.16■□□□□ 0.18
CBX1-206ENST00000581003 RTKN2Q8IZC4 609 aa16.16■□□□□ 0.18
CBX1-206ENST00000581003 LRRC37AA6NMS7 1700 aa16.15■□□□□ 0.18
CBX1-206ENST00000581003 DDX58O95786 925 aaKnown RBP16.15■□□□□ 0.18
CBX1-206ENST00000581003 ZBTB38Q8NAP3 1195 aaPredicted RBP16.15■□□□□ 0.18
CBX1-206ENST00000581003 CDCA7LQ96GN5 454 aa16.15■□□□□ 0.18
CBX1-206ENST00000581003 WDR90Q96KV7 1748 aa16.15■□□□□ 0.18
CBX1-206ENST00000581003 MYH16Q9H6N6 1097 aa16.15■□□□□ 0.18
CBX1-206ENST00000581003 CWC25Q9NXE8 425 aaPredicted RBP16.15■□□□□ 0.18
CBX1-206ENST00000581003 ATP6V0A2Q9Y487 856 aa16.15■□□□□ 0.18
CBX1-206ENST00000581003 F6X3S4 739 aa16.14■□□□□ 0.17
CBX1-206ENST00000581003 GRAPQ13588 217 aa16.14■□□□□ 0.17
CBX1-206ENST00000581003 DDX46Q7L014 1031 aaKnown RBP16.14■□□□□ 0.17
CBX1-206ENST00000581003 MIER1Q8N108 512 aa16.14■□□□□ 0.17
CBX1-206ENST00000581003 CCDC191Q8NCU4 936 aa16.14■□□□□ 0.17
CBX1-206ENST00000581003 GRAPLQ8TC17 118 aaPredicted RBP16.14■□□□□ 0.17
CBX1-206ENST00000581003 PSMD1Q99460 953 aa16.14■□□□□ 0.17
CBX1-206ENST00000581003 SEC31BQ9NQW1 1179 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms