RNA–Protein interactions for RNA: ENST00000580278.5

CCDC144NL-AS1-213, CCDC144NL antisense RNA 1, humanhuman

TSL 1 (best)

Gene CCDC144NL-AS1, Length 1,819 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-AS1-213ENST00000580278 FAM161AQ3B820 660 aa20.89■□□□□ 0.93
CCDC144NL-AS1-213ENST00000580278 NPM2Q86SE8 214 aaKnown RBP20.89■□□□□ 0.93
CCDC144NL-AS1-213ENST00000580278 ZNF34Q8IZ26 560 aa20.89■□□□□ 0.93
CCDC144NL-AS1-213ENST00000580278 SCN7AQ01118 1682 aa20.88■□□□□ 0.93
CCDC144NL-AS1-213ENST00000580278 SURF6O75683 361 aaKnown RBP20.88■□□□□ 0.93
CCDC144NL-AS1-213ENST00000580278 PCCAP05165 728 aaPredicted RBP20.88■□□□□ 0.93
CCDC144NL-AS1-213ENST00000580278 PLEKHM2Q8IWE5 1019 aa20.88■□□□□ 0.93
CCDC144NL-AS1-213ENST00000580278 C16orf71Q8IYS4 520 aaPredicted RBP20.88■□□□□ 0.93
CCDC144NL-AS1-213ENST00000580278 LRRCC1Q9C099 1032 aa20.88■□□□□ 0.93
CCDC144NL-AS1-213ENST00000580278 UBN2Q6ZU65 1347 aa20.88■□□□□ 0.93
CCDC144NL-AS1-213ENST00000580278 APBB1O00213 710 aa20.88■□□□□ 0.93
CCDC144NL-AS1-213ENST00000580278 RAB11FIP3O75154 756 aa20.88■□□□□ 0.93
CCDC144NL-AS1-213ENST00000580278 RBM19Q9Y4C8 960 aaKnown RBP20.88■□□□□ 0.93
CCDC144NL-AS1-213ENST00000580278 SALL3Q9BXA9 1300 aa20.87■□□□□ 0.93
CCDC144NL-AS1-213ENST00000580278 RPS6KA4O75676 772 aa20.87■□□□□ 0.93
CCDC144NL-AS1-213ENST00000580278 GPTP24298 496 aa20.87■□□□□ 0.93
CCDC144NL-AS1-213ENST00000580278 RFX5P48382 616 aaPredicted RBP20.87■□□□□ 0.93
CCDC144NL-AS1-213ENST00000580278 ILDR1Q86SU0 546 aaPredicted RBP20.87■□□□□ 0.93
CCDC144NL-AS1-213ENST00000580278 ZBTB38Q8NAP3 1195 aaPredicted RBP20.87■□□□□ 0.93
CCDC144NL-AS1-213ENST00000580278 OTUD7AQ8TE49 926 aaPredicted RBP20.87■□□□□ 0.93
CCDC144NL-AS1-213ENST00000580278 RTL5Q5HYW3 569 aaPredicted RBP20.86■□□□□ 0.93
CCDC144NL-AS1-213ENST00000580278 PA2G4Q9UQ80 394 aaKnown RBP20.86■□□□□ 0.93
CCDC144NL-AS1-213ENST00000580278 RGL2O15211 777 aa20.85■□□□□ 0.93
CCDC144NL-AS1-213ENST00000580278 PLA2G12BQ9BX93 195 aa20.85■□□□□ 0.93
CCDC144NL-AS1-213ENST00000580278 CDHR2Q9BYE9 1310 aa20.85■□□□□ 0.93
CCDC144NL-AS1-213ENST00000580278 HSP90AB4PQ58FF6 505 aa20.85■□□□□ 0.93
CCDC144NL-AS1-213ENST00000580278 PROM2Q8N271 834 aa20.85■□□□□ 0.93
CCDC144NL-AS1-213ENST00000580278 RHPN1Q8TCX5 695 aa20.84■□□□□ 0.93
CCDC144NL-AS1-213ENST00000580278 BMP2KLQ5H9B9 411 aa20.83■□□□□ 0.93
CCDC144NL-AS1-213ENST00000580278 LMBR1LQ6UX01 489 aa20.83■□□□□ 0.93
CCDC144NL-AS1-213ENST00000580278 KIF1BPQ96EK5 621 aa20.83■□□□□ 0.93
CCDC144NL-AS1-213ENST00000580278 FAM89AQ96GI7 184 aa20.83■□□□□ 0.93
CCDC144NL-AS1-213ENST00000580278 COPRSQ9NQ92 184 aa20.83■□□□□ 0.93
CCDC144NL-AS1-213ENST00000580278 ZBTB47Q9UFB7 747 aaPredicted RBP20.83■□□□□ 0.93
CCDC144NL-AS1-213ENST00000580278 C4AP0C0L4 1744 aa20.83■□□□□ 0.93
CCDC144NL-AS1-213ENST00000580278 GNPATO15228 680 aa20.83■□□□□ 0.92
CCDC144NL-AS1-213ENST00000580278 PTPN12Q05209 780 aaKnown RBP20.83■□□□□ 0.92
CCDC144NL-AS1-213ENST00000580278 SLC27A3Q5K4L6 730 aa20.83■□□□□ 0.92
CCDC144NL-AS1-213ENST00000580278 CLEC4GQ6UXB4 293 aa20.83■□□□□ 0.92
CCDC144NL-AS1-213ENST00000580278 OSBPL3Q9H4L5 887 aa20.83■□□□□ 0.92
CCDC144NL-AS1-213ENST00000580278 SYNE4Q8N205 404 aa20.82■□□□□ 0.92
CCDC144NL-AS1-213ENST00000580278 UBR3Q6ZT12 1888 aa20.82■□□□□ 0.92
CCDC144NL-AS1-213ENST00000580278 KLHDC4Q8TBB5 520 aa20.81■□□□□ 0.92
CCDC144NL-AS1-213ENST00000580278 BCL2L12Q9HB09 334 aa20.81■□□□□ 0.92
CCDC144NL-AS1-213ENST00000580278 TNS1Q9HBL0 1735 aaKnown RBP20.81■□□□□ 0.92
CCDC144NL-AS1-213ENST00000580278 GSPT1P15170 499 aaKnown RBP20.81■□□□□ 0.92
CCDC144NL-AS1-213ENST00000580278 IL1RAPL2Q9NP60 686 aa20.81■□□□□ 0.92
CCDC144NL-AS1-213ENST00000580278 MYH3P11055 1940 aa20.8■□□□□ 0.92
CCDC144NL-AS1-213ENST00000580278 TUBGCP6Q96RT7 1819 aa20.8■□□□□ 0.92
CCDC144NL-AS1-213ENST00000580278 SASH1O94885 1247 aa20.8■□□□□ 0.92
CCDC144NL-AS1-213ENST00000580278 APBA3O96018 575 aa20.8■□□□□ 0.92
CCDC144NL-AS1-213ENST00000580278 CSF1RP07333 972 aa20.8■□□□□ 0.92
CCDC144NL-AS1-213ENST00000580278 PARP10Q53GL7 1025 aa20.8■□□□□ 0.92
CCDC144NL-AS1-213ENST00000580278 SUSD4Q5VX71 490 aa20.8■□□□□ 0.92
CCDC144NL-AS1-213ENST00000580278 BCL11AQ9H165 835 aa20.8■□□□□ 0.92
CCDC144NL-AS1-213ENST00000580278 NARFQ9UHQ1 456 aa20.8■□□□□ 0.92
CCDC144NL-AS1-213ENST00000580278 RTCBQ9Y3I0 505 aaKnown RBP20.8■□□□□ 0.92
CCDC144NL-AS1-213ENST00000580278 PDE1AP54750 535 aa20.79■□□□□ 0.92
CCDC144NL-AS1-213ENST00000580278 ERC1Q8IUD2 1116 aa20.79■□□□□ 0.92
CCDC144NL-AS1-213ENST00000580278 TRMT112Q9UI30 125 aaKnown RBP20.79■□□□□ 0.92
CCDC144NL-AS1-213ENST00000580278 ZNF652Q9Y2D9 606 aa20.79■□□□□ 0.92
CCDC144NL-AS1-213ENST00000580278 PLSCR1O15162 318 aa20.78■□□□□ 0.92
CCDC144NL-AS1-213ENST00000580278 TXNRD1Q16881 649 aa20.78■□□□□ 0.92
CCDC144NL-AS1-213ENST00000580278 TTC22Q5TAA0 569 aa20.78■□□□□ 0.92
CCDC144NL-AS1-213ENST00000580278 STAP2Q9UGK3 403 aa20.78■□□□□ 0.92
CCDC144NL-AS1-213ENST00000580278 SRP68Q9UHB9 627 aaKnown RBP20.78■□□□□ 0.92
CCDC144NL-AS1-213ENST00000580278 LAMB2P55268 1798 aa20.78■□□□□ 0.92
CCDC144NL-AS1-213ENST00000580278 COL24A1Q17RW2 1714 aa20.78■□□□□ 0.92
CCDC144NL-AS1-213ENST00000580278 NIP7Q9Y221 180 aaKnown RBP eCLIP20.78■□□□□ 0.92
CCDC144NL-AS1-213ENST00000580278 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.78■□□□□ 0.92
CCDC144NL-AS1-213ENST00000580278 DDX60Q8IY21 1712 aaKnown RBP20.77■□□□□ 0.92
CCDC144NL-AS1-213ENST00000580278 PHF14O94880 888 aa20.77■□□□□ 0.92
CCDC144NL-AS1-213ENST00000580278 NTSR2O95665 410 aa20.77■□□□□ 0.92
CCDC144NL-AS1-213ENST00000580278 ARHGEF1Q92888 912 aaKnown RBP20.77■□□□□ 0.92
CCDC144NL-AS1-213ENST00000580278 RGPD3A6NKT7 1758 aaPredicted RBP20.77■□□□□ 0.91
CCDC144NL-AS1-213ENST00000580278 RGPD4Q7Z3J3 1758 aa20.77■□□□□ 0.91
CCDC144NL-AS1-213ENST00000580278 IRS4O14654 1257 aaPredicted RBP20.76■□□□□ 0.91
CCDC144NL-AS1-213ENST00000580278 G3BP1Q13283 466 aaKnown RBP eCLIP20.76■□□□□ 0.91
CCDC144NL-AS1-213ENST00000580278 FAM177BA6PVY3 158 aa20.76■□□□□ 0.91
CCDC144NL-AS1-213ENST00000580278 MX1P20591 662 aa20.76■□□□□ 0.91
CCDC144NL-AS1-213ENST00000580278 OS9Q13438 667 aaPredicted RBP20.76■□□□□ 0.91
CCDC144NL-AS1-213ENST00000580278 USPL1Q5W0Q7 1092 aa20.76■□□□□ 0.91
CCDC144NL-AS1-213ENST00000580278 AK7Q96M32 723 aa20.76■□□□□ 0.91
CCDC144NL-AS1-213ENST00000580278 SIL1Q9H173 461 aa20.76■□□□□ 0.91
CCDC144NL-AS1-213ENST00000580278 TTLL11Q8NHH1 800 aa20.75■□□□□ 0.91
CCDC144NL-AS1-213ENST00000580278 UTP14AQ9BVJ6 771 aaKnown RBP20.75■□□□□ 0.91
CCDC144NL-AS1-213ENST00000580278 AOX1Q06278 1338 aa20.75■□□□□ 0.91
CCDC144NL-AS1-213ENST00000580278 SH3TC1Q8TE82 1336 aa20.75■□□□□ 0.91
CCDC144NL-AS1-213ENST00000580278 USP42Q9H9J4 1324 aaKnown RBP20.75■□□□□ 0.91
CCDC144NL-AS1-213ENST00000580278 PDE8AO60658 829 aa20.74■□□□□ 0.91
CCDC144NL-AS1-213ENST00000580278 ADRA2BP18089 450 aa20.74■□□□□ 0.91
CCDC144NL-AS1-213ENST00000580278 CTSWP56202 376 aa20.74■□□□□ 0.91
CCDC144NL-AS1-213ENST00000580278 ATG9AQ7Z3C6 839 aa20.74■□□□□ 0.91
CCDC144NL-AS1-213ENST00000580278 CHMP3Q9Y3E7 222 aa20.74■□□□□ 0.91
CCDC144NL-AS1-213ENST00000580278 SEC24BO95487 1268 aa20.73■□□□□ 0.91
CCDC144NL-AS1-213ENST00000580278 TSHZ3Q63HK5 1081 aa20.73■□□□□ 0.91
CCDC144NL-AS1-213ENST00000580278 TBC1D9BQ66K14 1250 aa20.73■□□□□ 0.91
CCDC144NL-AS1-213ENST00000580278 NUTM1Q86Y26 1132 aa20.73■□□□□ 0.91
CCDC144NL-AS1-213ENST00000580278 CLASRPQ8N2M8 674 aaKnown RBP20.73■□□□□ 0.91
CCDC144NL-AS1-213ENST00000580278 TRAPPC3LQ5T215 181 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms