RNA–Protein interactions for RNA: ENST00000579211.1

ITGB4-205, Transcript of integrin subunit beta 4, humanhuman

TSL 2

Gene ITGB4, Length 411 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-205ENST00000579211 IBTKQ9P2D0 1353 aaPredicted RBP22.47■■□□□ 1.19
ITGB4-205ENST00000579211 TNRC6CQ9HCJ0 1690 aaKnown RBP22.46■■□□□ 1.19
ITGB4-205ENST00000579211 MIER1Q8N108 512 aa22.46■■□□□ 1.19
ITGB4-205ENST00000579211 RPGRQ92834 1020 aaKnown RBP22.46■■□□□ 1.19
ITGB4-205ENST00000579211 TRMT112Q9UI30 125 aaKnown RBP22.46■■□□□ 1.19
ITGB4-205ENST00000579211 NTSR2O95665 410 aa22.45■■□□□ 1.18
ITGB4-205ENST00000579211 LAMB2P55268 1798 aa22.45■■□□□ 1.18
ITGB4-205ENST00000579211 ATP5J2-PTCD1G3V325 749 aa22.44■■□□□ 1.18
ITGB4-205ENST00000579211 C21orf2O43822 256 aa22.44■■□□□ 1.18
ITGB4-205ENST00000579211 SLC4A2P04920 1241 aa22.44■■□□□ 1.18
ITGB4-205ENST00000579211 ALDH1B1P30837 517 aa22.44■■□□□ 1.18
ITGB4-205ENST00000579211 NLRP10Q86W26 655 aa22.44■■□□□ 1.18
ITGB4-205ENST00000579211 ZNF784Q8NCA9 323 aaPredicted RBP22.44■■□□□ 1.18
ITGB4-205ENST00000579211 NLRP3Q96P20 1036 aa22.44■■□□□ 1.18
ITGB4-205ENST00000579211 FER1L6Q2WGJ9 1857 aa22.43■■□□□ 1.18
ITGB4-205ENST00000579211 ZNF428Q96B54 188 aa22.43■■□□□ 1.18
ITGB4-205ENST00000579211 SPINK5Q9NQ38 1064 aaPredicted RBP22.43■■□□□ 1.18
ITGB4-205ENST00000579211 ABCC12Q96J65 1359 aa22.42■■□□□ 1.18
ITGB4-205ENST00000579211 RNF123Q5XPI4 1314 aa22.42■■□□□ 1.18
ITGB4-205ENST00000579211 PRPF40BQ6NWY9 871 aaKnown RBP22.42■■□□□ 1.18
ITGB4-205ENST00000579211 SH3TC1Q8TE82 1336 aa22.41■■□□□ 1.18
ITGB4-205ENST00000579211 KLRG2A4D1S0 409 aaPredicted RBP22.41■■□□□ 1.18
ITGB4-205ENST00000579211 VAMP4O75379 141 aa22.41■■□□□ 1.18
ITGB4-205ENST00000579211 SOGA3Q5TF21 947 aa22.41■■□□□ 1.18
ITGB4-205ENST00000579211 MYD88Q99836 296 aa22.41■■□□□ 1.18
ITGB4-205ENST00000579211 DICER1Q9UPY3 1922 aaKnown RBP22.41■■□□□ 1.18
ITGB4-205ENST00000579211 C9orf131Q5VYM1 1079 aa22.4■■□□□ 1.18
ITGB4-205ENST00000579211 RBM17Q96I25 401 aaKnown RBP22.4■■□□□ 1.18
ITGB4-205ENST00000579211 ISCA1Q9BUE6 129 aa22.4■■□□□ 1.18
ITGB4-205ENST00000579211 E9PSI1 815 aa22.39■■□□□ 1.17
ITGB4-205ENST00000579211 NEXNQ0ZGT2 675 aa22.39■■□□□ 1.17
ITGB4-205ENST00000579211 RNF181Q9P0P0 153 aa22.39■■□□□ 1.17
ITGB4-205ENST00000579211 MAP3K2Q9Y2U5 619 aa22.39■■□□□ 1.17
ITGB4-205ENST00000579211 DDX60Q8IY21 1712 aaKnown RBP22.39■■□□□ 1.17
ITGB4-205ENST00000579211 RIC1Q4ADV7 1423 aa22.39■■□□□ 1.17
ITGB4-205ENST00000579211 ZNF521Q96K83 1311 aa22.38■■□□□ 1.17
ITGB4-205ENST00000579211 HCLS1P14317 486 aaPredicted RBP22.38■■□□□ 1.17
ITGB4-205ENST00000579211 RASSF7Q02833 373 aa22.38■■□□□ 1.17
ITGB4-205ENST00000579211 SLC10A5Q5PT55 438 aa22.38■■□□□ 1.17
ITGB4-205ENST00000579211 KSR2Q6VAB6 950 aa22.38■■□□□ 1.17
ITGB4-205ENST00000579211 ZNF526Q8TF50 670 aaPredicted RBP22.38■■□□□ 1.17
ITGB4-205ENST00000579211 TAF1P21675 1872 aa22.38■■□□□ 1.17
ITGB4-205ENST00000579211 PI4KAP2A4QPH2 592 aa22.37■■□□□ 1.17
ITGB4-205ENST00000579211 FKBP5Q13451 457 aaPredicted RBP22.37■■□□□ 1.17
ITGB4-205ENST00000579211 RTL5Q5HYW3 569 aaPredicted RBP22.37■■□□□ 1.17
ITGB4-205ENST00000579211 PI4KAP1Q8N8J0 262 aa22.37■■□□□ 1.17
ITGB4-205ENST00000579211 METTL22Q9BUU2 404 aaPredicted RBP22.37■■□□□ 1.17
ITGB4-205ENST00000579211 TMX4Q9H1E5 349 aaPredicted RBP22.37■■□□□ 1.17
ITGB4-205ENST00000579211 CRY2Q49AN0 593 aa22.36■■□□□ 1.17
ITGB4-205ENST00000579211 G2E3Q7L622 706 aa22.36■■□□□ 1.17
ITGB4-205ENST00000579211 FAM89AQ96GI7 184 aa22.36■■□□□ 1.17
ITGB4-205ENST00000579211 GPBP1L1Q9HC44 474 aaPredicted RBP22.36■■□□□ 1.17
ITGB4-205ENST00000579211 MYH3P11055 1940 aa22.35■■□□□ 1.17
ITGB4-205ENST00000579211 LMNB1P20700 586 aa22.35■■□□□ 1.17
ITGB4-205ENST00000579211 FLIIQ13045 1269 aa22.35■■□□□ 1.17
ITGB4-205ENST00000579211 TRIM28Q13263 835 aaKnown RBP22.35■■□□□ 1.17
ITGB4-205ENST00000579211 CCDC93Q567U6 631 aa22.35■■□□□ 1.17
ITGB4-205ENST00000579211 SYNE4Q8N205 404 aa22.35■■□□□ 1.17
ITGB4-205ENST00000579211 CCDC191Q8NCU4 936 aa22.35■■□□□ 1.17
ITGB4-205ENST00000579211 CWC25Q9NXE8 425 aaPredicted RBP22.35■■□□□ 1.17
ITGB4-205ENST00000579211 TIAM2Q8IVF5 1701 aa22.34■■□□□ 1.17
ITGB4-205ENST00000579211 HSP90B1P14625 803 aaKnown RBP22.34■■□□□ 1.17
ITGB4-205ENST00000579211 TAOK3Q9H2K8 898 aa22.34■■□□□ 1.17
ITGB4-205ENST00000579211 HOXA10P31260 410 aaPredicted RBP22.33■■□□□ 1.17
ITGB4-205ENST00000579211 SLFN5Q08AF3 891 aa22.33■■□□□ 1.17
ITGB4-205ENST00000579211 DDX46Q7L014 1031 aaKnown RBP22.33■■□□□ 1.17
ITGB4-205ENST00000579211 CRAMP1Q96RY5 1269 aa22.33■■□□□ 1.17
ITGB4-205ENST00000579211 IRS4O14654 1257 aaPredicted RBP22.32■■□□□ 1.16
ITGB4-205ENST00000579211 C3orf67Q6ZVT6 689 aa22.32■■□□□ 1.16
ITGB4-205ENST00000579211 RTKN2Q8IZC4 609 aa22.32■■□□□ 1.16
ITGB4-205ENST00000579211 ZBTB38Q8NAP3 1195 aaPredicted RBP22.32■■□□□ 1.16
ITGB4-205ENST00000579211 ADCY9O60503 1353 aa22.32■■□□□ 1.16
ITGB4-205ENST00000579211 NFKBIEO00221 500 aa22.31■■□□□ 1.16
ITGB4-205ENST00000579211 PPEF1O14829 653 aaPredicted RBP22.31■■□□□ 1.16
ITGB4-205ENST00000579211 CDCA7LQ96GN5 454 aa22.3■■□□□ 1.16
ITGB4-205ENST00000579211 CC2D2BQ6DHV5 1058 aa22.29■■□□□ 1.16
ITGB4-205ENST00000579211 C7orf43Q8WVR3 580 aa22.29■■□□□ 1.16
ITGB4-205ENST00000579211 DNAAF4Q8WXU2 420 aa22.29■■□□□ 1.16
ITGB4-205ENST00000579211 PCCAP05165 728 aaPredicted RBP22.28■■□□□ 1.16
ITGB4-205ENST00000579211 OLFM4Q6UX06 510 aa22.28■■□□□ 1.16
ITGB4-205ENST00000579211 JARID2Q92833 1246 aaPredicted RBP22.28■■□□□ 1.16
ITGB4-205ENST00000579211 ABCC4O15439 1325 aa22.28■■□□□ 1.16
ITGB4-205ENST00000579211 LTBP3Q9NS15 1303 aa22.28■■□□□ 1.16
ITGB4-205ENST00000579211 FKBP4Q02790 459 aaKnown RBP eCLIP22.27■■□□□ 1.16
ITGB4-205ENST00000579211 CWF19L2Q2TBE0 894 aaKnown RBP22.27■■□□□ 1.16
ITGB4-205ENST00000579211 KDM2BQ8NHM5 1336 aa22.27■■□□□ 1.16
ITGB4-205ENST00000579211 BBOX1O75936 387 aa22.26■■□□□ 1.15
ITGB4-205ENST00000579211 HNRNPUQ00839 825 aaKnown RBP eCLIP22.26■■□□□ 1.15
ITGB4-205ENST00000579211 GRIPAP1Q4V328 841 aa22.26■■□□□ 1.15
ITGB4-205ENST00000579211 NEURL1BA8MQ27 555 aa22.25■■□□□ 1.15
ITGB4-205ENST00000579211 IGKV5-2P06315 115 aa22.25■■□□□ 1.15
ITGB4-205ENST00000579211 GRAPQ13588 217 aa22.25■■□□□ 1.15
ITGB4-205ENST00000579211 GRAPLQ8TC17 118 aaPredicted RBP22.25■■□□□ 1.15
ITGB4-205ENST00000579211 ZC3H4Q9UPT8 1303 aaKnown RBP22.25■■□□□ 1.15
ITGB4-205ENST00000579211 SPEF2Q9C093 1822 aa22.24■■□□□ 1.15
ITGB4-205ENST00000579211 PDE8AO60658 829 aa22.24■■□□□ 1.15
ITGB4-205ENST00000579211 PRELPP51888 382 aa22.24■■□□□ 1.15
ITGB4-205ENST00000579211 SF3B3Q15393 1217 aaKnown RBP22.24■■□□□ 1.15
ITGB4-205ENST00000579211 DPY19L2Q6NUT2 758 aa22.24■■□□□ 1.15
ITGB4-205ENST00000579211 F6X3S4 739 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms