RNA–Protein interactions for RNA: ENST00000578875.5

PPP4R1-211, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-211ENST00000578875 SCN11AQ9UI33 1791 aa11.05□□□□□ -0.64
PPP4R1-211ENST00000578875 TRIOBPQ9H2D6 2365 aa11.05□□□□□ -0.64
PPP4R1-211ENST00000578875 PIP4K2AP48426 406 aaPredicted RBP11.05□□□□□ -0.64
PPP4R1-211ENST00000578875 CUL9Q8IWT3 2517 aa11.05□□□□□ -0.64
PPP4R1-211ENST00000578875 RNMTO43148 476 aaKnown RBP11.04□□□□□ -0.64
PPP4R1-211ENST00000578875 EN2P19622 333 aaPredicted RBP11.04□□□□□ -0.64
PPP4R1-211ENST00000578875 FBXO46Q6PJ61 603 aaPredicted RBP11.04□□□□□ -0.64
PPP4R1-211ENST00000578875 R3HDMLQ9H3Y0 253 aa11.04□□□□□ -0.64
PPP4R1-211ENST00000578875 GBA2Q9HCG7 927 aaPredicted RBP11.04□□□□□ -0.64
PPP4R1-211ENST00000578875 SZT2Q5T011 3432 aa11.03□□□□□ -0.64
PPP4R1-211ENST00000578875 STARD3NLO95772 234 aa11.03□□□□□ -0.64
PPP4R1-211ENST00000578875 ALDH1B1P30837 517 aa11.03□□□□□ -0.64
PPP4R1-211ENST00000578875 VSIG10Q8N0Z9 540 aa11.03□□□□□ -0.64
PPP4R1-211ENST00000578875 OTUD5Q96G74 571 aa11.03□□□□□ -0.64
PPP4R1-211ENST00000578875 MKI67P46013 3256 aaKnown RBP11.03□□□□□ -0.64
PPP4R1-211ENST00000578875 ARFGEF2Q9Y6D5 1785 aa11.03□□□□□ -0.64
PPP4R1-211ENST00000578875 ADM5C9JUS6 153 aa11.02□□□□□ -0.65
PPP4R1-211ENST00000578875 EGFRP00533 1210 aa11.02□□□□□ -0.65
PPP4R1-211ENST00000578875 SLC10A3P09131 477 aa11.02□□□□□ -0.65
PPP4R1-211ENST00000578875 AOC3Q16853 763 aa11.02□□□□□ -0.65
PPP4R1-211ENST00000578875 SULT6B1Q6IMI4 303 aa11.02□□□□□ -0.65
PPP4R1-211ENST00000578875 NIM1KQ8IY84 436 aa11.02□□□□□ -0.65
PPP4R1-211ENST00000578875 C2orf69Q8N8R5 385 aa11.02□□□□□ -0.65
PPP4R1-211ENST00000578875 ZC3H15Q8WU90 426 aaKnown RBP11.02□□□□□ -0.65
PPP4R1-211ENST00000578875 ZNF496Q96IT1 587 aaPredicted RBP11.02□□□□□ -0.65
PPP4R1-211ENST00000578875 NPC1L1Q9UHC9 1359 aa11.02□□□□□ -0.65
PPP4R1-211ENST00000578875 H0YGN5 161 aa11.01□□□□□ -0.65
PPP4R1-211ENST00000578875 GPR25O00155 361 aa11.01□□□□□ -0.65
PPP4R1-211ENST00000578875 RAD17O75943 681 aa11.01□□□□□ -0.65
PPP4R1-211ENST00000578875 IL6STP40189 918 aaPredicted RBP11.01□□□□□ -0.65
PPP4R1-211ENST00000578875 SAMD7Q7Z3H4 446 aa11.01□□□□□ -0.65
PPP4R1-211ENST00000578875 DZIP3Q86Y13 1208 aaKnown RBP11.01□□□□□ -0.65
PPP4R1-211ENST00000578875 CNOT7Q9UIV1 285 aaKnown RBP11.01□□□□□ -0.65
PPP4R1-211ENST00000578875 AKAP11Q9UKA4 1901 aa11□□□□□ -0.65
PPP4R1-211ENST00000578875 PPIP5K2O43314 1243 aa11□□□□□ -0.65
PPP4R1-211ENST00000578875 TPTE2Q6XPS3 522 aa11□□□□□ -0.65
PPP4R1-211ENST00000578875 BCL2L13Q9BXK5 485 aa11□□□□□ -0.65
PPP4R1-211ENST00000578875 BCORQ6W2J9 1755 aa10.99□□□□□ -0.65
PPP4R1-211ENST00000578875 KRT26Q7Z3Y9 468 aa10.99□□□□□ -0.65
PPP4R1-211ENST00000578875 RASAL3Q86YV0 1011 aa10.99□□□□□ -0.65
PPP4R1-211ENST00000578875 RBM27Q9P2N5 1060 aaKnown RBP10.99□□□□□ -0.65
PPP4R1-211ENST00000578875 ZNRF3Q9ULT6 936 aa10.99□□□□□ -0.65
PPP4R1-211ENST00000578875 ZBTB12Q9Y330 459 aaPredicted RBP10.99□□□□□ -0.65
PPP4R1-211ENST00000578875 KIF20BQ96Q89 1820 aa10.98□□□□□ -0.65
PPP4R1-211ENST00000578875 RBM26Q5T8P6 1007 aaKnown RBP10.98□□□□□ -0.65
PPP4R1-211ENST00000578875 CHRDL2Q6WN34 429 aa10.98□□□□□ -0.65
PPP4R1-211ENST00000578875 MOB2Q70IA6 237 aa10.98□□□□□ -0.65
PPP4R1-211ENST00000578875 NUTM1Q86Y26 1132 aa10.98□□□□□ -0.65
PPP4R1-211ENST00000578875 NIP7Q9Y221 180 aaKnown RBP eCLIP10.98□□□□□ -0.65
PPP4R1-211ENST00000578875 PITPNM2Q9BZ72 1349 aa10.98□□□□□ -0.65
PPP4R1-211ENST00000578875 POLR2AP24928 1970 aaKnown RBP10.97□□□□□ -0.65
PPP4R1-211ENST00000578875 KIAA0100Q14667 2235 aaKnown RBP10.97□□□□□ -0.65
PPP4R1-211ENST00000578875 KCNQ3O43525 872 aa10.97□□□□□ -0.65
PPP4R1-211ENST00000578875 HLFQ16534 295 aa10.97□□□□□ -0.65
PPP4R1-211ENST00000578875 TBC1D10BQ4KMP7 808 aaPredicted RBP10.97□□□□□ -0.65
PPP4R1-211ENST00000578875 CC2D2BQ6DHV5 1058 aa10.97□□□□□ -0.65
PPP4R1-211ENST00000578875 MICALL2Q8IY33 904 aa10.97□□□□□ -0.65
PPP4R1-211ENST00000578875 USP16Q9Y5T5 823 aa10.97□□□□□ -0.65
PPP4R1-211ENST00000578875 CEP290O15078 2479 aa10.96□□□□□ -0.65
PPP4R1-211ENST00000578875 ANKRD26Q9UPS8 1709 aa10.96□□□□□ -0.65
PPP4R1-211ENST00000578875 ASTN2O75129 1339 aaPredicted RBP10.96□□□□□ -0.65
PPP4R1-211ENST00000578875 PRAMEF22A3QJZ6 481 aa10.96□□□□□ -0.65
PPP4R1-211ENST00000578875 YDJCA8MPS7 323 aa10.96□□□□□ -0.65
PPP4R1-211ENST00000578875 CRY2Q49AN0 593 aa10.96□□□□□ -0.65
PPP4R1-211ENST00000578875 SCN7AQ01118 1682 aa10.95□□□□□ -0.66
PPP4R1-211ENST00000578875 H7C1D1 291 aa10.95□□□□□ -0.66
PPP4R1-211ENST00000578875 FKTNO75072 461 aa10.95□□□□□ -0.66
PPP4R1-211ENST00000578875 GTF2E1P29083 439 aaPredicted RBP10.95□□□□□ -0.66
PPP4R1-211ENST00000578875 MNX1P50219 401 aaPredicted RBP10.95□□□□□ -0.66
PPP4R1-211ENST00000578875 MKRN3Q13064 507 aaKnown RBP10.95□□□□□ -0.66
PPP4R1-211ENST00000578875 CLEC4GQ6UXB4 293 aa10.95□□□□□ -0.66
PPP4R1-211ENST00000578875 C3orf67Q6ZVT6 689 aa10.95□□□□□ -0.66
PPP4R1-211ENST00000578875 NPM2Q86SE8 214 aaKnown RBP10.95□□□□□ -0.66
PPP4R1-211ENST00000578875 TTC5Q8N0Z6 440 aa10.95□□□□□ -0.66
PPP4R1-211ENST00000578875 SCAF8Q9UPN6 1271 aaKnown RBP10.95□□□□□ -0.66
PPP4R1-211ENST00000578875 HEG1Q9ULI3 1381 aa10.94□□□□□ -0.66
PPP4R1-211ENST00000578875 HOXA10P31260 410 aaPredicted RBP10.94□□□□□ -0.66
PPP4R1-211ENST00000578875 MTHFSDQ2M296 383 aaKnown RBP10.94□□□□□ -0.66
PPP4R1-211ENST00000578875 COL25A1Q9BXS0 654 aaPredicted RBP10.94□□□□□ -0.66
PPP4R1-211ENST00000578875 TRIM17Q9Y577 477 aa10.94□□□□□ -0.66
PPP4R1-211ENST00000578875 COL6A3P12111 3177 aa10.93□□□□□ -0.66
PPP4R1-211ENST00000578875 PAPPA2Q9BXP8 1791 aa10.93□□□□□ -0.66
PPP4R1-211ENST00000578875 ABCC12Q96J65 1359 aa10.93□□□□□ -0.66
PPP4R1-211ENST00000578875 UBE2Q2LH0YL09 131 aa10.93□□□□□ -0.66
PPP4R1-211ENST00000578875 PPEF1O14829 653 aaPredicted RBP10.93□□□□□ -0.66
PPP4R1-211ENST00000578875 TM4SF4P48230 202 aa10.93□□□□□ -0.66
PPP4R1-211ENST00000578875 INTS3Q68E01 1043 aaKnown RBP10.93□□□□□ -0.66
PPP4R1-211ENST00000578875 ZNF790Q6PG37 636 aa10.93□□□□□ -0.66
PPP4R1-211ENST00000578875 OTOP1Q7RTM1 612 aa10.93□□□□□ -0.66
PPP4R1-211ENST00000578875 REM2Q8IYK8 340 aaPredicted RBP10.93□□□□□ -0.66
PPP4R1-211ENST00000578875 DCPSQ96C86 337 aaKnown RBP10.93□□□□□ -0.66
PPP4R1-211ENST00000578875 CDCA5Q96FF9 252 aa10.93□□□□□ -0.66
PPP4R1-211ENST00000578875 TEX13AQ9BXU3 409 aaPredicted RBP10.93□□□□□ -0.66
PPP4R1-211ENST00000578875 KCNQ5Q9NR82 932 aa10.93□□□□□ -0.66
PPP4R1-211ENST00000578875 MRC1P22897 1456 aa10.93□□□□□ -0.66
PPP4R1-211ENST00000578875 SOX1O00570 391 aaPredicted RBP10.92□□□□□ -0.66
PPP4R1-211ENST00000578875 HMOX1P09601 288 aa10.92□□□□□ -0.66
PPP4R1-211ENST00000578875 IL13P35225 146 aa10.92□□□□□ -0.66
PPP4R1-211ENST00000578875 CAP1Q01518 475 aa10.92□□□□□ -0.66
PPP4R1-211ENST00000578875 TNIP1Q15025 636 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms