RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 IARSP41252 1262 aaKnown RBP16.51■□□□□ 0.23
SMARCD2-207ENST00000578234 SUSD4Q5VX71 490 aa16.51■□□□□ 0.23
SMARCD2-207ENST00000578234 SYNE4Q8N205 404 aa16.51■□□□□ 0.23
SMARCD2-207ENST00000578234 PSMD1Q99460 953 aa16.51■□□□□ 0.23
SMARCD2-207ENST00000578234 TAF1DQ9H5J8 278 aaPredicted RBP16.51■□□□□ 0.23
SMARCD2-207ENST00000578234 FZD9O00144 591 aa16.5■□□□□ 0.23
SMARCD2-207ENST00000578234 TMPOP42166 694 aaKnown RBP16.5■□□□□ 0.23
SMARCD2-207ENST00000578234 GRIPAP1Q4V328 841 aa16.5■□□□□ 0.23
SMARCD2-207ENST00000578234 LRP10Q7Z4F1 713 aa16.5■□□□□ 0.23
SMARCD2-207ENST00000578234 LDHDQ86WU2 507 aa16.5■□□□□ 0.23
SMARCD2-207ENST00000578234 RPGRQ92834 1020 aaKnown RBP16.5■□□□□ 0.23
SMARCD2-207ENST00000578234 CREBZFQ9NS37 354 aa16.5■□□□□ 0.23
SMARCD2-207ENST00000578234 SNED1Q8TER0 1413 aa16.5■□□□□ 0.23
SMARCD2-207ENST00000578234 ZNF541Q9H0D2 1346 aa16.49■□□□□ 0.23
SMARCD2-207ENST00000578234 NTSR2O95665 410 aa16.49■□□□□ 0.23
SMARCD2-207ENST00000578234 LMOD3Q0VAK6 560 aa16.49■□□□□ 0.23
SMARCD2-207ENST00000578234 PDIA6Q15084 440 aa16.49■□□□□ 0.23
SMARCD2-207ENST00000578234 PARP10Q53GL7 1025 aa16.49■□□□□ 0.23
SMARCD2-207ENST00000578234 PPP1R42Q7Z4L9 355 aa16.49■□□□□ 0.23
SMARCD2-207ENST00000578234 CRAMP1Q96RY5 1269 aa16.49■□□□□ 0.23
SMARCD2-207ENST00000578234 GJA3Q9Y6H8 435 aa16.49■□□□□ 0.23
SMARCD2-207ENST00000578234 EIF2S2P20042 333 aaKnown RBP16.48■□□□□ 0.23
SMARCD2-207ENST00000578234 JDP2Q8WYK2 163 aa16.48■□□□□ 0.23
SMARCD2-207ENST00000578234 HACL1Q9UJ83 578 aa16.48■□□□□ 0.23
SMARCD2-207ENST00000578234 GPC2Q8N158 579 aa16.47■□□□□ 0.23
SMARCD2-207ENST00000578234 RBM17Q96I25 401 aaKnown RBP16.47■□□□□ 0.23
SMARCD2-207ENST00000578234 PASKQ96RG2 1323 aa16.46■□□□□ 0.23
SMARCD2-207ENST00000578234 SLC10A5Q5PT55 438 aa16.46■□□□□ 0.23
SMARCD2-207ENST00000578234 PNMA8AQ86V59 439 aaPredicted RBP16.46■□□□□ 0.23
SMARCD2-207ENST00000578234 NLRP3Q96P20 1036 aa16.46■□□□□ 0.23
SMARCD2-207ENST00000578234 TMX4Q9H1E5 349 aaPredicted RBP16.46■□□□□ 0.23
SMARCD2-207ENST00000578234 ITGBL1O95965 494 aaPredicted RBP16.45■□□□□ 0.22
SMARCD2-207ENST00000578234 EPHX2P34913 555 aa16.45■□□□□ 0.22
SMARCD2-207ENST00000578234 EIF6P56537 245 aaKnown RBP16.45■□□□□ 0.22
SMARCD2-207ENST00000578234 AIDAQ96BJ3 306 aa16.45■□□□□ 0.22
SMARCD2-207ENST00000578234 UTP14AQ9BVJ6 771 aaKnown RBP16.45■□□□□ 0.22
SMARCD2-207ENST00000578234 RNF123Q5XPI4 1314 aa16.45■□□□□ 0.22
SMARCD2-207ENST00000578234 MYBBP1AQ9BQG0 1328 aaKnown RBP16.45■□□□□ 0.22
SMARCD2-207ENST00000578234 CHL1O00533 1208 aa16.44■□□□□ 0.22
SMARCD2-207ENST00000578234 PPEF1O14829 653 aaPredicted RBP16.44■□□□□ 0.22
SMARCD2-207ENST00000578234 PROSER3Q2NL68 480 aa16.44■□□□□ 0.22
SMARCD2-207ENST00000578234 PAXIP1Q6ZW49 1069 aaPredicted RBP16.44■□□□□ 0.22
SMARCD2-207ENST00000578234 TMEM88BA6NKF7 163 aa16.43■□□□□ 0.22
SMARCD2-207ENST00000578234 ANXA1P04083 346 aa16.43■□□□□ 0.22
SMARCD2-207ENST00000578234 LMOD1P29536 600 aaPredicted RBP16.43■□□□□ 0.22
SMARCD2-207ENST00000578234 GRM1Q13255 1194 aa16.43■□□□□ 0.22
SMARCD2-207ENST00000578234 HSP90AB3PQ58FF7 597 aa16.43■□□□□ 0.22
SMARCD2-207ENST00000578234 MAP1SQ66K74 1059 aaPredicted RBP16.43■□□□□ 0.22
SMARCD2-207ENST00000578234 C3orf67Q6ZVT6 689 aa16.43■□□□□ 0.22
SMARCD2-207ENST00000578234 COPS6Q7L5N1 327 aa16.43■□□□□ 0.22
SMARCD2-207ENST00000578234 ADAMTSL1Q8N6G6 1762 aa16.42■□□□□ 0.22
SMARCD2-207ENST00000578234 NEUROD2Q15784 382 aa16.42■□□□□ 0.22
SMARCD2-207ENST00000578234 LARGE2Q8N3Y3 721 aa16.42■□□□□ 0.22
SMARCD2-207ENST00000578234 NECTIN2Q92692 538 aa16.42■□□□□ 0.22
SMARCD2-207ENST00000578234 RUNDC1Q96C34 613 aa16.42■□□□□ 0.22
SMARCD2-207ENST00000578234 VPS33BQ9H267 617 aa16.42■□□□□ 0.22
SMARCD2-207ENST00000578234 DDX21Q9NR30 783 aaKnown RBP eCLIP16.42■□□□□ 0.22
SMARCD2-207ENST00000578234 ABT1Q9ULW3 272 aaKnown RBP16.42■□□□□ 0.22
SMARCD2-207ENST00000578234 ATP6V0A2Q9Y487 856 aa16.42■□□□□ 0.22
SMARCD2-207ENST00000578234 COL4A5P29400 1685 aa16.42■□□□□ 0.22
SMARCD2-207ENST00000578234 CNTNAP1P78357 1384 aa16.41■□□□□ 0.22
SMARCD2-207ENST00000578234 AIMP1Q12904 312 aaKnown RBP16.41■□□□□ 0.22
SMARCD2-207ENST00000578234 TCIRG1Q13488 830 aa16.41■□□□□ 0.22
SMARCD2-207ENST00000578234 NLRP10Q86W26 655 aa16.41■□□□□ 0.22
SMARCD2-207ENST00000578234 CCDC146Q8IYE0 955 aa16.41■□□□□ 0.22
SMARCD2-207ENST00000578234 CNTROBQ8N137 903 aa16.41■□□□□ 0.22
SMARCD2-207ENST00000578234 XAGE3Q8WTP9 111 aa16.41■□□□□ 0.22
SMARCD2-207ENST00000578234 TRIM35Q9UPQ4 493 aa16.41■□□□□ 0.22
SMARCD2-207ENST00000578234 BBOX1O75936 387 aa16.4■□□□□ 0.22
SMARCD2-207ENST00000578234 VEGFBP49765 207 aa16.4■□□□□ 0.22
SMARCD2-207ENST00000578234 WDR43Q15061 677 aaKnown RBP eCLIP16.4■□□□□ 0.22
SMARCD2-207ENST00000578234 ZNF428Q96B54 188 aa16.4■□□□□ 0.22
SMARCD2-207ENST00000578234 LAS1LQ9Y4W2 734 aaKnown RBP16.4■□□□□ 0.22
SMARCD2-207ENST00000578234 SLC51AQ86UW1 340 aa16.39■□□□□ 0.21
SMARCD2-207ENST00000578234 ANKRD36CQ5JPF3 1778 aa16.38■□□□□ 0.21
SMARCD2-207ENST00000578234 FOXN1O15353 648 aa16.38■□□□□ 0.21
SMARCD2-207ENST00000578234 HOXB7P09629 217 aa16.38■□□□□ 0.21
SMARCD2-207ENST00000578234 SCNN1DP51172 638 aa16.38■□□□□ 0.21
SMARCD2-207ENST00000578234 KRT24Q2M2I5 525 aa16.38■□□□□ 0.21
SMARCD2-207ENST00000578234 DEFB115Q30KQ5 88 aa16.38■□□□□ 0.21
SMARCD2-207ENST00000578234 SP8Q8IXZ3 490 aa16.38■□□□□ 0.21
SMARCD2-207ENST00000578234 NIM1KQ8IY84 436 aa16.38■□□□□ 0.21
SMARCD2-207ENST00000578234 SUPT20HQ8NEM7 779 aa16.38■□□□□ 0.21
SMARCD2-207ENST00000578234 RTFDC1Q9BY42 306 aaPredicted RBP16.38■□□□□ 0.21
SMARCD2-207ENST00000578234 TRMT112Q9UI30 125 aaKnown RBP16.38■□□□□ 0.21
SMARCD2-207ENST00000578234 ADAMTS8Q9UP79 889 aa16.38■□□□□ 0.21
SMARCD2-207ENST00000578234 ABCC4O15439 1325 aa16.38■□□□□ 0.21
SMARCD2-207ENST00000578234 PPIP5K2O43314 1243 aa16.37■□□□□ 0.21
SMARCD2-207ENST00000578234 HCLS1P14317 486 aaPredicted RBP16.37■□□□□ 0.21
SMARCD2-207ENST00000578234 AOC3Q16853 763 aa16.37■□□□□ 0.21
SMARCD2-207ENST00000578234 CHPF2Q9P2E5 772 aa16.37■□□□□ 0.21
SMARCD2-207ENST00000578234 SH3TC1Q8TE82 1336 aa16.37■□□□□ 0.21
SMARCD2-207ENST00000578234 EPS15P42566 896 aa16.36■□□□□ 0.21
SMARCD2-207ENST00000578234 HDGFL1Q5TGJ6 251 aa16.36■□□□□ 0.21
SMARCD2-207ENST00000578234 USP50Q70EL3 339 aaPredicted RBP16.36■□□□□ 0.21
SMARCD2-207ENST00000578234 DDX46Q7L014 1031 aaKnown RBP16.36■□□□□ 0.21
SMARCD2-207ENST00000578234 PLBD2Q8NHP8 589 aa16.36■□□□□ 0.21
SMARCD2-207ENST00000578234 CFAP44Q96MT7 982 aa16.36■□□□□ 0.21
SMARCD2-207ENST00000578234 DBF4Q9UBU7 674 aaPredicted RBP16.36■□□□□ 0.21
SMARCD2-207ENST00000578234 ZNRF3Q9ULT6 936 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms