RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 ZNF594Q96JF6 807 aaPredicted RBP16.24■□□□□ 0.19
NDEL1-204ENST00000578172 LSG1Q9H089 658 aaKnown RBP16.24■□□□□ 0.19
NDEL1-204ENST00000578172 OSBPL3Q9H4L5 887 aa16.24■□□□□ 0.19
NDEL1-204ENST00000578172 TOMM22Q9NS69 142 aa16.24■□□□□ 0.19
NDEL1-204ENST00000578172 TFCP2Q12800 502 aa16.24■□□□□ 0.19
NDEL1-204ENST00000578172 MAPK8IP2Q13387 824 aaPredicted RBP16.24■□□□□ 0.19
NDEL1-204ENST00000578172 BRF1Q92994 677 aa16.24■□□□□ 0.19
NDEL1-204ENST00000578172 ARHGEF10O15013 1369 aa16.24■□□□□ 0.19
NDEL1-204ENST00000578172 TNMDQ9H2S6 317 aa16.24■□□□□ 0.19
NDEL1-204ENST00000578172 TBX22Q9Y458 520 aa16.24■□□□□ 0.19
NDEL1-204ENST00000578172 CEP170BQ9Y4F5 1589 aaPredicted RBP16.24■□□□□ 0.19
NDEL1-204ENST00000578172 APPP05067 770 aa16.23■□□□□ 0.19
NDEL1-204ENST00000578172 LARP1Q6PKG0 1096 aaKnown RBP16.23■□□□□ 0.19
NDEL1-204ENST00000578172 ZNF589Q86UQ0 364 aaPredicted RBP16.23■□□□□ 0.19
NDEL1-204ENST00000578172 TPCN1Q9ULQ1 816 aa16.23■□□□□ 0.19
NDEL1-204ENST00000578172 KRT85P78386 507 aa16.23■□□□□ 0.19
NDEL1-204ENST00000578172 DACT1Q9NYF0 836 aa16.23■□□□□ 0.19
NDEL1-204ENST00000578172 DBNDD2Q9BQY9 259 aa16.23■□□□□ 0.19
NDEL1-204ENST00000578172 CABP4P57796 275 aa16.22■□□□□ 0.19
NDEL1-204ENST00000578172 SF3A1Q15459 793 aaKnown RBP16.22■□□□□ 0.19
NDEL1-204ENST00000578172 ZNF496Q96IT1 587 aaPredicted RBP16.22■□□□□ 0.19
NDEL1-204ENST00000578172 PPP1R9BQ96SB3 815 aa16.22■□□□□ 0.19
NDEL1-204ENST00000578172 EPHA10Q5JZY3 1008 aa16.22■□□□□ 0.19
NDEL1-204ENST00000578172 GIGYF1O75420 1035 aaPredicted RBP16.22■□□□□ 0.19
NDEL1-204ENST00000578172 TATP17735 454 aaPredicted RBP16.22■□□□□ 0.19
NDEL1-204ENST00000578172 ANAPC15P60006 121 aa16.22■□□□□ 0.19
NDEL1-204ENST00000578172 AKAP4Q5JQC9 854 aa16.22■□□□□ 0.19
NDEL1-204ENST00000578172 LMBR1LQ6UX01 489 aa16.22■□□□□ 0.19
NDEL1-204ENST00000578172 FILIP1Q7Z7B0 1213 aa16.22■□□□□ 0.19
NDEL1-204ENST00000578172 ZBTB9Q96C00 473 aa16.22■□□□□ 0.19
NDEL1-204ENST00000578172 NUP62CLQ9H1M0 184 aa16.22■□□□□ 0.19
NDEL1-204ENST00000578172 NCOA5Q9HCD5 579 aaKnown RBP16.22■□□□□ 0.19
NDEL1-204ENST00000578172 RIMS1Q86UR5 1692 aaKnown RBP16.21■□□□□ 0.19
NDEL1-204ENST00000578172 LIG1P18858 919 aa16.21■□□□□ 0.19
NDEL1-204ENST00000578172 OTUD7BQ6GQQ9 843 aa16.21■□□□□ 0.19
NDEL1-204ENST00000578172 EVI5LQ96CN4 794 aa16.21■□□□□ 0.19
NDEL1-204ENST00000578172 FTOQ9C0B1 505 aaKnown RBP eCLIP16.21■□□□□ 0.19
NDEL1-204ENST00000578172 OFD1O75665 1012 aa16.21■□□□□ 0.19
NDEL1-204ENST00000578172 TPM2P07951 284 aa16.21■□□□□ 0.19
NDEL1-204ENST00000578172 PTPRUQ92729 1446 aa16.21■□□□□ 0.19
NDEL1-204ENST00000578172 CCDC171Q6TFL3 1326 aa16.21■□□□□ 0.19
NDEL1-204ENST00000578172 ATP2B1P20020 1258 aa16.2■□□□□ 0.18
NDEL1-204ENST00000578172 SASS6Q6UVJ0 657 aa16.2■□□□□ 0.18
NDEL1-204ENST00000578172 SASH1O94885 1247 aa16.2■□□□□ 0.18
NDEL1-204ENST00000578172 ANKRD13DQ6ZTN6 518 aa16.2■□□□□ 0.18
NDEL1-204ENST00000578172 VIRMAQ69YN4 1812 aaKnown RBP16.2■□□□□ 0.18
NDEL1-204ENST00000578172 BECN2A8MW95 431 aa16.2■□□□□ 0.18
NDEL1-204ENST00000578172 PSMA5P28066 241 aa16.2■□□□□ 0.18
NDEL1-204ENST00000578172 UBE2HP62256 183 aa16.2■□□□□ 0.18
NDEL1-204ENST00000578172 ERC1Q8IUD2 1116 aa16.2■□□□□ 0.18
NDEL1-204ENST00000578172 NOL7Q9UMY1 257 aaKnown RBP16.2■□□□□ 0.18
NDEL1-204ENST00000578172 SLC27A2O14975 620 aa16.19■□□□□ 0.18
NDEL1-204ENST00000578172 IGSF3O75054 1194 aa16.19■□□□□ 0.18
NDEL1-204ENST00000578172 GPTP24298 496 aa16.19■□□□□ 0.18
NDEL1-204ENST00000578172 GNL2Q13823 731 aaKnown RBP16.19■□□□□ 0.18
NDEL1-204ENST00000578172 STAP2Q9UGK3 403 aa16.19■□□□□ 0.18
NDEL1-204ENST00000578172 CUL4AQ13619 759 aa16.19■□□□□ 0.18
NDEL1-204ENST00000578172 CCDC144CPQ8IYA2 1237 aa16.19■□□□□ 0.18
NDEL1-204ENST00000578172 KCNH5Q8NCM2 988 aa16.19■□□□□ 0.18
NDEL1-204ENST00000578172 C16orf45Q96MC5 204 aaPredicted RBP16.19■□□□□ 0.18
NDEL1-204ENST00000578172 HYPKQ9NX55 129 aa16.19■□□□□ 0.18
NDEL1-204ENST00000578172 USP32Q8NFA0 1604 aa16.18■□□□□ 0.18
NDEL1-204ENST00000578172 BIN1O00499 593 aa16.18■□□□□ 0.18
NDEL1-204ENST00000578172 CCDC192P0DO97 292 aa16.18■□□□□ 0.18
NDEL1-204ENST00000578172 Q6ZUG5 572 aa16.18■□□□□ 0.18
NDEL1-204ENST00000578172 INTS4Q96HW7 963 aaKnown RBP16.18■□□□□ 0.18
NDEL1-204ENST00000578172 KIF24Q5T7B8 1368 aa16.18■□□□□ 0.18
NDEL1-204ENST00000578172 OVOS2A0A0J9YW53 1432 aa16.18■□□□□ 0.18
NDEL1-204ENST00000578172 GOLGA6L19H0YKK7 550 aa16.18■□□□□ 0.18
NDEL1-204ENST00000578172 ATF3P18847 181 aa16.18■□□□□ 0.18
NDEL1-204ENST00000578172 OVOS2Q6IE36 1432 aa16.18■□□□□ 0.18
NDEL1-204ENST00000578172 TOM1L2Q6ZVM7 507 aa16.18■□□□□ 0.18
NDEL1-204ENST00000578172 CCDC82Q8N4S0 544 aa16.18■□□□□ 0.18
NDEL1-204ENST00000578172 DNAJC25Q9H1X3 360 aa16.18■□□□□ 0.18
NDEL1-204ENST00000578172 ADAMTS13Q76LX8 1427 aa16.18■□□□□ 0.18
NDEL1-204ENST00000578172 POLR3DP05423 398 aaPredicted RBP16.18■□□□□ 0.18
NDEL1-204ENST00000578172 ME1P48163 572 aa16.18■□□□□ 0.18
NDEL1-204ENST00000578172 CSPP1Q1MSJ5 1256 aa16.18■□□□□ 0.18
NDEL1-204ENST00000578172 LINS1Q8NG48 757 aa16.18■□□□□ 0.18
NDEL1-204ENST00000578172 MTMR6Q9Y217 621 aa16.18■□□□□ 0.18
NDEL1-204ENST00000578172 NEURL4Q96JN8 1562 aa16.18■□□□□ 0.18
NDEL1-204ENST00000578172 SPDYE4A6NLX3 237 aa16.17■□□□□ 0.18
NDEL1-204ENST00000578172 HTATSF1O43719 755 aaKnown RBP16.17■□□□□ 0.18
NDEL1-204ENST00000578172 APOBRQ0VD83 1088 aa16.17■□□□□ 0.18
NDEL1-204ENST00000578172 TTC6Q86TZ1 520 aa16.17■□□□□ 0.18
NDEL1-204ENST00000578172 RXRAP19793 462 aa16.17■□□□□ 0.18
NDEL1-204ENST00000578172 PTGS1P23219 599 aa16.17■□□□□ 0.18
NDEL1-204ENST00000578172 ANO6Q4KMQ2 910 aa16.17■□□□□ 0.18
NDEL1-204ENST00000578172 KIF20BQ96Q89 1820 aa16.17■□□□□ 0.18
NDEL1-204ENST00000578172 MAP3K11Q16584 847 aa16.17■□□□□ 0.18
NDEL1-204ENST00000578172 ZNF790Q6PG37 636 aa16.17■□□□□ 0.18
NDEL1-204ENST00000578172 A1BGP04217 495 aa16.16■□□□□ 0.18
NDEL1-204ENST00000578172 DLC1Q96QB1 1528 aa16.16■□□□□ 0.18
NDEL1-204ENST00000578172 CBX1P83916 185 aa16.16■□□□□ 0.18
NDEL1-204ENST00000578172 HSP90AA4PQ58FG1 418 aa16.16■□□□□ 0.18
NDEL1-204ENST00000578172 SDF4Q9BRK5 362 aa16.16■□□□□ 0.18
NDEL1-204ENST00000578172 TRMT1Q9NXH9 659 aaKnown RBP16.16■□□□□ 0.18
NDEL1-204ENST00000578172 HDAC5Q9UQL6 1122 aa16.16■□□□□ 0.18
NDEL1-204ENST00000578172 LRMPQ12912 555 aa16.15■□□□□ 0.18
NDEL1-204ENST00000578172 NOLC1Q14978 699 aaKnown RBP eCLIP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms