RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 MTIF2P46199 727 aaKnown RBP12.34□□□□□ -0.43
SEC22B-201ENST00000578049 TTC41PQ6P2S7 1318 aa12.33□□□□□ -0.43
SEC22B-201ENST00000578049 TDRD12Q587J7 1177 aaKnown RBP12.33□□□□□ -0.43
SEC22B-201ENST00000578049 RNF187Q5TA31 235 aaPredicted RBP12.33□□□□□ -0.43
SEC22B-201ENST00000578049 CATIPQ7Z7H3 387 aa12.33□□□□□ -0.43
SEC22B-201ENST00000578049 USP48Q86UV5 1035 aa12.33□□□□□ -0.43
SEC22B-201ENST00000578049 SKAP1Q86WV1 359 aa12.33□□□□□ -0.43
SEC22B-201ENST00000578049 MAPKBP1O60336 1514 aa12.33□□□□□ -0.44
SEC22B-201ENST00000578049 ALDH1L1O75891 902 aa12.33□□□□□ -0.44
SEC22B-201ENST00000578049 GIMAP6Q6P9H5 292 aa12.33□□□□□ -0.44
SEC22B-201ENST00000578049 PLVAPQ9BX97 442 aa12.33□□□□□ -0.44
SEC22B-201ENST00000578049 HSF2BPO75031 334 aa12.33□□□□□ -0.44
SEC22B-201ENST00000578049 IFIT3O14879 490 aaKnown RBP12.33□□□□□ -0.44
SEC22B-201ENST00000578049 IFIT5Q13325 482 aaKnown RBP12.33□□□□□ -0.44
SEC22B-201ENST00000578049 GOLGA1Q92805 767 aa12.33□□□□□ -0.44
SEC22B-201ENST00000578049 DCTPP1Q9H773 170 aa12.33□□□□□ -0.44
SEC22B-201ENST00000578049 MBIPQ9NS73 344 aa12.33□□□□□ -0.44
SEC22B-201ENST00000578049 HSPA4P34932 840 aa12.33□□□□□ -0.44
SEC22B-201ENST00000578049 HLTFQ14527 1009 aaKnown RBP eCLIP12.33□□□□□ -0.44
SEC22B-201ENST00000578049 TNIP1Q15025 636 aa12.33□□□□□ -0.44
SEC22B-201ENST00000578049 N4BP3O15049 544 aa12.32□□□□□ -0.44
SEC22B-201ENST00000578049 ANO6Q4KMQ2 910 aa12.32□□□□□ -0.44
SEC22B-201ENST00000578049 ZHX1Q9UKY1 873 aaPredicted RBP12.32□□□□□ -0.44
SEC22B-201ENST00000578049 DISP3Q9P2K9 1392 aa12.32□□□□□ -0.44
SEC22B-201ENST00000578049 NBPF7P0C2Y1 421 aaPredicted RBP12.32□□□□□ -0.44
SEC22B-201ENST00000578049 STXBP4Q6ZWJ1 553 aa12.32□□□□□ -0.44
SEC22B-201ENST00000578049 CALML4Q96GE6 196 aa12.32□□□□□ -0.44
SEC22B-201ENST00000578049 PANK2Q9BZ23 570 aa12.32□□□□□ -0.44
SEC22B-201ENST00000578049 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.32□□□□□ -0.44
SEC22B-201ENST00000578049 POGZQ7Z3K3 1410 aa12.32□□□□□ -0.44
SEC22B-201ENST00000578049 GSTTP1A0A1W2PQM5 241 aa12.32□□□□□ -0.44
SEC22B-201ENST00000578049 NSRP1Q9H0G5 558 aaKnown RBP12.32□□□□□ -0.44
SEC22B-201ENST00000578049 PPP1R42Q7Z4L9 355 aa12.32□□□□□ -0.44
SEC22B-201ENST00000578049 TRIM21P19474 475 aaKnown RBP12.32□□□□□ -0.44
SEC22B-201ENST00000578049 MNAT1P51948 309 aa12.32□□□□□ -0.44
SEC22B-201ENST00000578049 CCDC178Q5BJE1 867 aa12.32□□□□□ -0.44
SEC22B-201ENST00000578049 CAVIN4Q5BKX8 364 aa12.32□□□□□ -0.44
SEC22B-201ENST00000578049 UBA7P41226 1012 aa12.32□□□□□ -0.44
SEC22B-201ENST00000578049 PRIM1P49642 420 aaKnown RBP12.32□□□□□ -0.44
SEC22B-201ENST00000578049 TOM1L2Q6ZVM7 507 aa12.32□□□□□ -0.44
SEC22B-201ENST00000578049 CNKSR2Q8WXI2 1034 aa12.32□□□□□ -0.44
SEC22B-201ENST00000578049 DNAI1Q9UI46 699 aa12.32□□□□□ -0.44
SEC22B-201ENST00000578049 ZNF652Q9Y2D9 606 aa12.32□□□□□ -0.44
SEC22B-201ENST00000578049 SLC5A1P13866 664 aa12.31□□□□□ -0.44
SEC22B-201ENST00000578049 ZNF76P36508 570 aa12.31□□□□□ -0.44
SEC22B-201ENST00000578049 KRT83P78385 493 aa12.31□□□□□ -0.44
SEC22B-201ENST00000578049 TYRO3Q06418 890 aa12.31□□□□□ -0.44
SEC22B-201ENST00000578049 GABPB1Q06547 395 aaPredicted RBP12.31□□□□□ -0.44
SEC22B-201ENST00000578049 HOOK3Q86VS8 718 aa12.31□□□□□ -0.44
SEC22B-201ENST00000578049 STMN4Q9H169 189 aaPredicted RBP12.31□□□□□ -0.44
SEC22B-201ENST00000578049 DACT1Q9NYF0 836 aa12.31□□□□□ -0.44
SEC22B-201ENST00000578049 SNAPC4Q5SXM2 1469 aa12.31□□□□□ -0.44
SEC22B-201ENST00000578049 ARHGEF11O15085 1522 aa12.31□□□□□ -0.44
SEC22B-201ENST00000578049 WASLO00401 505 aaPredicted RBP12.31□□□□□ -0.44
SEC22B-201ENST00000578049 PRPHP41219 470 aa12.31□□□□□ -0.44
SEC22B-201ENST00000578049 NPC1L1Q9UHC9 1359 aa12.31□□□□□ -0.44
SEC22B-201ENST00000578049 F6X3S4 739 aa12.31□□□□□ -0.44
SEC22B-201ENST00000578049 ERO1AQ96HE7 468 aa12.31□□□□□ -0.44
SEC22B-201ENST00000578049 CCDC8Q9H0W5 538 aaPredicted RBP12.31□□□□□ -0.44
SEC22B-201ENST00000578049 AKR1B10O60218 316 aa12.31□□□□□ -0.44
SEC22B-201ENST00000578049 ATP8B2P98198 1209 aa12.31□□□□□ -0.44
SEC22B-201ENST00000578049 C6orf163Q5TEZ5 329 aa12.31□□□□□ -0.44
SEC22B-201ENST00000578049 METAP2P50579 478 aaKnown RBP eCLIP12.3□□□□□ -0.44
SEC22B-201ENST00000578049 STAMBPO95630 424 aa12.3□□□□□ -0.44
SEC22B-201ENST00000578049 ZNF445P59923 1031 aa12.3□□□□□ -0.44
SEC22B-201ENST00000578049 TEX13AQ9BXU3 409 aaPredicted RBP12.3□□□□□ -0.44
SEC22B-201ENST00000578049 ARHGEF12Q9NZN5 1544 aa12.3□□□□□ -0.44
SEC22B-201ENST00000578049 SPDYE4A6NLX3 237 aa12.3□□□□□ -0.44
SEC22B-201ENST00000578049 EBAG9O00559 213 aa12.3□□□□□ -0.44
SEC22B-201ENST00000578049 CPLX3Q8WVH0 158 aa12.3□□□□□ -0.44
SEC22B-201ENST00000578049 NLRP5P59047 1200 aa12.3□□□□□ -0.44
SEC22B-201ENST00000578049 ATP2B2Q01814 1243 aa12.3□□□□□ -0.44
SEC22B-201ENST00000578049 SAMD1Q6SPF0 538 aaPredicted RBP12.3□□□□□ -0.44
SEC22B-201ENST00000578049 CCDC113Q9H0I3 377 aa12.3□□□□□ -0.44
SEC22B-201ENST00000578049 UQCRFS1P1P0C7P4 283 aa12.3□□□□□ -0.44
SEC22B-201ENST00000578049 CCDC155Q8N6L0 562 aa12.3□□□□□ -0.44
SEC22B-201ENST00000578049 CNNM2Q9H8M5 875 aa12.3□□□□□ -0.44
SEC22B-201ENST00000578049 TTC21AQ8NDW8 1320 aa12.29□□□□□ -0.44
SEC22B-201ENST00000578049 BIN1O00499 593 aa12.29□□□□□ -0.44
SEC22B-201ENST00000578049 TACC1O75410 805 aa12.29□□□□□ -0.44
SEC22B-201ENST00000578049 SLF2Q8IX21 1173 aa12.29□□□□□ -0.44
SEC22B-201ENST00000578049 JADE2Q9NQC1 790 aa12.29□□□□□ -0.44
SEC22B-201ENST00000578049 EMILIN1Q9Y6C2 1016 aa12.29□□□□□ -0.44
SEC22B-201ENST00000578049 CTAGE9A4FU28 777 aa12.29□□□□□ -0.44
SEC22B-201ENST00000578049 KRT86O43790 486 aa12.29□□□□□ -0.44
SEC22B-201ENST00000578049 BRAPQ7Z569 592 aa12.29□□□□□ -0.44
SEC22B-201ENST00000578049 MYD88Q99836 296 aa12.29□□□□□ -0.44
SEC22B-201ENST00000578049 PRDM11Q9NQV5 511 aa12.29□□□□□ -0.44
SEC22B-201ENST00000578049 GUCY1B3Q02153 619 aa12.29□□□□□ -0.44
SEC22B-201ENST00000578049 CNPY2Q9Y2B0 182 aa12.29□□□□□ -0.44
SEC22B-201ENST00000578049 ANKLE2Q86XL3 938 aa12.29□□□□□ -0.44
SEC22B-201ENST00000578049 BRF1Q92994 677 aa12.29□□□□□ -0.44
SEC22B-201ENST00000578049 MKNK2Q9HBH9 465 aa12.29□□□□□ -0.44
SEC22B-201ENST00000578049 FSD2A1L4K1 749 aa12.29□□□□□ -0.44
SEC22B-201ENST00000578049 FAM177BA6PVY3 158 aa12.28□□□□□ -0.44
SEC22B-201ENST00000578049 SYT1P21579 422 aa12.28□□□□□ -0.44
SEC22B-201ENST00000578049 TMEM67Q5HYA8 995 aa12.28□□□□□ -0.44
SEC22B-201ENST00000578049 MAATS1Q7Z4T9 603 aa12.28□□□□□ -0.44
SEC22B-201ENST00000578049 ZBTB40Q9NUA8 1239 aa12.28□□□□□ -0.44
SEC22B-201ENST00000578049 ABCF2Q9UG63 623 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms