RNA–Protein interactions for RNA: ENST00000577483.1

SSH2-205, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,630 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-205ENST00000577483 C3orf67Q6ZVT6 689 aa16.48■□□□□ 0.23
SSH2-205ENST00000577483 TAOK3Q9H2K8 898 aa16.48■□□□□ 0.23
SSH2-205ENST00000577483 CALD1Q05682 793 aaKnown RBP16.48■□□□□ 0.23
SSH2-205ENST00000577483 PARP10Q53GL7 1025 aa16.48■□□□□ 0.23
SSH2-205ENST00000577483 PPP1R42Q7Z4L9 355 aa16.48■□□□□ 0.23
SSH2-205ENST00000577483 KDM2BQ8NHM5 1336 aa16.47■□□□□ 0.23
SSH2-205ENST00000577483 DBF4Q9UBU7 674 aaPredicted RBP16.47■□□□□ 0.23
SSH2-205ENST00000577483 LRRC37AA6NMS7 1700 aa16.46■□□□□ 0.23
SSH2-205ENST00000577483 ELL2O00472 640 aaPredicted RBP16.46■□□□□ 0.23
SSH2-205ENST00000577483 SOGA3Q5TF21 947 aa16.46■□□□□ 0.23
SSH2-205ENST00000577483 SLC51AQ86UW1 340 aa16.46■□□□□ 0.23
SSH2-205ENST00000577483 NLRP10Q86W26 655 aa16.46■□□□□ 0.23
SSH2-205ENST00000577483 C8orf58Q8NAV2 365 aa16.46■□□□□ 0.23
SSH2-205ENST00000577483 SCN4AP35499 1836 aa16.46■□□□□ 0.22
SSH2-205ENST00000577483 COL4A1P02462 1669 aa16.45■□□□□ 0.22
SSH2-205ENST00000577483 TCIRG1Q13488 830 aa16.45■□□□□ 0.22
SSH2-205ENST00000577483 CCDC27Q2M243 656 aa16.45■□□□□ 0.22
SSH2-205ENST00000577483 CCDC93Q567U6 631 aa16.45■□□□□ 0.22
SSH2-205ENST00000577483 HSP90AB3PQ58FF7 597 aa16.45■□□□□ 0.22
SSH2-205ENST00000577483 UTP14AQ9BVJ6 771 aaKnown RBP16.45■□□□□ 0.22
SSH2-205ENST00000577483 MYH3P11055 1940 aa16.45■□□□□ 0.22
SSH2-205ENST00000577483 COL4A5P29400 1685 aa16.45■□□□□ 0.22
SSH2-205ENST00000577483 GLTPD2A6NH11 291 aa16.45■□□□□ 0.22
SSH2-205ENST00000577483 TOMM70O94826 608 aa16.45■□□□□ 0.22
SSH2-205ENST00000577483 ALDH1B1P30837 517 aa16.45■□□□□ 0.22
SSH2-205ENST00000577483 WWC1Q8IX03 1113 aa16.45■□□□□ 0.22
SSH2-205ENST00000577483 PLBD2Q8NHP8 589 aa16.45■□□□□ 0.22
SSH2-205ENST00000577483 TSR2Q969E8 191 aaKnown RBP16.45■□□□□ 0.22
SSH2-205ENST00000577483 ZNF428Q96B54 188 aa16.45■□□□□ 0.22
SSH2-205ENST00000577483 RRAGCQ9HB90 399 aa16.45■□□□□ 0.22
SSH2-205ENST00000577483 HOXA10P31260 410 aaPredicted RBP16.44■□□□□ 0.22
SSH2-205ENST00000577483 SYNE4Q8N205 404 aa16.44■□□□□ 0.22
SSH2-205ENST00000577483 TSPYL6Q8N831 410 aa16.44■□□□□ 0.22
SSH2-205ENST00000577483 RPGRQ92834 1020 aaKnown RBP16.44■□□□□ 0.22
SSH2-205ENST00000577483 HYPKQ9NX55 129 aa16.44■□□□□ 0.22
SSH2-205ENST00000577483 SLC10A5Q5PT55 438 aa16.43■□□□□ 0.22
SSH2-205ENST00000577483 ANKRD13DQ6ZTN6 518 aa16.43■□□□□ 0.22
SSH2-205ENST00000577483 PHAXQ9H814 394 aaKnown RBP16.43■□□□□ 0.22
SSH2-205ENST00000577483 RNF123Q5XPI4 1314 aa16.43■□□□□ 0.22
SSH2-205ENST00000577483 SPEF2Q9C093 1822 aa16.42■□□□□ 0.22
SSH2-205ENST00000577483 HSPA6P17066 643 aa16.42■□□□□ 0.22
SSH2-205ENST00000577483 FKBP4Q02790 459 aaKnown RBP eCLIP16.42■□□□□ 0.22
SSH2-205ENST00000577483 NLRP3Q96P20 1036 aa16.41■□□□□ 0.22
SSH2-205ENST00000577483 ISCA1Q9BUE6 129 aa16.41■□□□□ 0.22
SSH2-205ENST00000577483 ZNF277Q9NRM2 450 aaPredicted RBP16.41■□□□□ 0.22
SSH2-205ENST00000577483 POTECB2RU33 542 aa16.41■□□□□ 0.22
SSH2-205ENST00000577483 HCLS1P14317 486 aaPredicted RBP16.41■□□□□ 0.22
SSH2-205ENST00000577483 SH3TC1Q8TE82 1336 aa16.41■□□□□ 0.22
SSH2-205ENST00000577483 CRAMP1Q96RY5 1269 aa16.41■□□□□ 0.22
SSH2-205ENST00000577483 TRMT112Q9UI30 125 aaKnown RBP16.41■□□□□ 0.22
SSH2-205ENST00000577483 LTBP1Q14766 1721 aa16.4■□□□□ 0.22
SSH2-205ENST00000577483 ABCC4O15439 1325 aa16.4■□□□□ 0.22
SSH2-205ENST00000577483 ATP5J2-PTCD1G3V325 749 aa16.4■□□□□ 0.22
SSH2-205ENST00000577483 RTKN2Q8IZC4 609 aa16.4■□□□□ 0.22
SSH2-205ENST00000577483 RBM46Q8TBY0 533 aaKnown RBP16.4■□□□□ 0.22
SSH2-205ENST00000577483 RBM17Q96I25 401 aaKnown RBP16.4■□□□□ 0.22
SSH2-205ENST00000577483 DUOX1Q9NRD9 1551 aa16.39■□□□□ 0.21
SSH2-205ENST00000577483 PPEF1O14829 653 aaPredicted RBP16.39■□□□□ 0.21
SSH2-205ENST00000577483 NCBP3Q53F19 620 aaKnown RBP16.39■□□□□ 0.21
SSH2-205ENST00000577483 C16orf71Q8IYS4 520 aaPredicted RBP16.39■□□□□ 0.21
SSH2-205ENST00000577483 SALL2Q9Y467 1007 aaPredicted RBP16.39■□□□□ 0.21
SSH2-205ENST00000577483 IL16Q14005 1332 aa16.38■□□□□ 0.21
SSH2-205ENST00000577483 TCERG1O14776 1098 aaKnown RBP16.38■□□□□ 0.21
SSH2-205ENST00000577483 ADAMTSL1Q8N6G6 1762 aa16.38■□□□□ 0.21
SSH2-205ENST00000577483 ZNF541Q9H0D2 1346 aa16.38■□□□□ 0.21
SSH2-205ENST00000577483 FANCIQ9NVI1 1328 aa16.38■□□□□ 0.21
SSH2-205ENST00000577483 DDNO94850 711 aaPredicted RBP16.37■□□□□ 0.21
SSH2-205ENST00000577483 IARSP41252 1262 aaKnown RBP16.37■□□□□ 0.21
SSH2-205ENST00000577483 CCDC30Q5VVM6 783 aa16.37■□□□□ 0.21
SSH2-205ENST00000577483 DPY19L2Q6NUT2 758 aa16.37■□□□□ 0.21
SSH2-205ENST00000577483 FAM89AQ96GI7 184 aa16.37■□□□□ 0.21
SSH2-205ENST00000577483 PSMD1Q99460 953 aa16.37■□□□□ 0.21
SSH2-205ENST00000577483 VEGFAP15692 232 aaPredicted RBP16.37■□□□□ 0.21
SSH2-205ENST00000577483 GOLGA2Q08379 1002 aa16.37■□□□□ 0.21
SSH2-205ENST00000577483 RIC3Q7Z5B4 369 aa16.37■□□□□ 0.21
SSH2-205ENST00000577483 FAM9BQ8IZU0 186 aa16.37■□□□□ 0.21
SSH2-205ENST00000577483 TWISTNBQ3B726 338 aaPredicted RBP16.36■□□□□ 0.21
SSH2-205ENST00000577483 CC2D2BQ6DHV5 1058 aa16.36■□□□□ 0.21
SSH2-205ENST00000577483 TRIM28Q13263 835 aaKnown RBP16.35■□□□□ 0.21
SSH2-205ENST00000577483 RTL5Q5HYW3 569 aaPredicted RBP16.35■□□□□ 0.21
SSH2-205ENST00000577483 ATP6V0A2Q9Y487 856 aa16.35■□□□□ 0.21
SSH2-205ENST00000577483 MYD88Q99836 296 aa16.34■□□□□ 0.21
SSH2-205ENST00000577483 SPINK5Q9NQ38 1064 aaPredicted RBP16.34■□□□□ 0.21
SSH2-205ENST00000577483 FZD9O00144 591 aa16.34■□□□□ 0.21
SSH2-205ENST00000577483 FSTL1Q12841 308 aa16.34■□□□□ 0.21
SSH2-205ENST00000577483 GRAPQ13588 217 aa16.33■□□□□ 0.2
SSH2-205ENST00000577483 G2E3Q7L622 706 aa16.33■□□□□ 0.2
SSH2-205ENST00000577483 WDR63Q8IWG1 891 aa16.33■□□□□ 0.2
SSH2-205ENST00000577483 GRAPLQ8TC17 118 aaPredicted RBP16.33■□□□□ 0.2
SSH2-205ENST00000577483 GRIPAP1Q4V328 841 aa16.32■□□□□ 0.2
SSH2-205ENST00000577483 DDX46Q7L014 1031 aaKnown RBP16.32■□□□□ 0.2
SSH2-205ENST00000577483 SMC1BQ8NDV3 1235 aa16.32■□□□□ 0.2
SSH2-205ENST00000577483 L3MBTL3Q96JM7 780 aaPredicted RBP16.32■□□□□ 0.2
SSH2-205ENST00000577483 METTL22Q9BUU2 404 aaPredicted RBP16.32■□□□□ 0.2
SSH2-205ENST00000577483 MAP3K2Q9Y2U5 619 aa16.32■□□□□ 0.2
SSH2-205ENST00000577483 IRS4O14654 1257 aaPredicted RBP16.31■□□□□ 0.2
SSH2-205ENST00000577483 POTEIP0CG38 1075 aa16.31■□□□□ 0.2
SSH2-205ENST00000577483 POTEJP0CG39 1038 aa16.31■□□□□ 0.2
SSH2-205ENST00000577483 APLP1P51693 650 aa16.31■□□□□ 0.2
SSH2-205ENST00000577483 SF3B3Q15393 1217 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms