RNA–Protein interactions for RNA: ENST00000576921.1

HCFC1R1-209, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best)

Gene HCFC1R1, Length 1,199 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-209ENST00000576921 HYPKQ9NX55 129 aa27.36■■□□□ 1.97
HCFC1R1-209ENST00000576921 SOGA3Q5TF21 947 aa27.35■■□□□ 1.97
HCFC1R1-209ENST00000576921 RPGRQ92834 1020 aaKnown RBP27.35■■□□□ 1.97
HCFC1R1-209ENST00000576921 PLBD2Q8NHP8 589 aa27.34■■□□□ 1.97
HCFC1R1-209ENST00000576921 TAOK3Q9H2K8 898 aa27.34■■□□□ 1.97
HCFC1R1-209ENST00000576921 TCIRG1Q13488 830 aa27.33■■□□□ 1.97
HCFC1R1-209ENST00000576921 CRY2Q49AN0 593 aa27.33■■□□□ 1.97
HCFC1R1-209ENST00000576921 NLRP10Q86W26 655 aa27.33■■□□□ 1.97
HCFC1R1-209ENST00000576921 ZNF428Q96B54 188 aa27.33■■□□□ 1.97
HCFC1R1-209ENST00000576921 NMRK2Q9NPI5 230 aa27.33■■□□□ 1.97
HCFC1R1-209ENST00000576921 ALDH1B1P30837 517 aa27.32■■□□□ 1.96
HCFC1R1-209ENST00000576921 CCDC93Q567U6 631 aa27.32■■□□□ 1.96
HCFC1R1-209ENST00000576921 ANKRD13DQ6ZTN6 518 aa27.32■■□□□ 1.96
HCFC1R1-209ENST00000576921 KDM2BQ8NHM5 1336 aa27.32■■□□□ 1.96
HCFC1R1-209ENST00000576921 KIF3CO14782 793 aa27.31■■□□□ 1.96
HCFC1R1-209ENST00000576921 TSPYL6Q8N831 410 aa27.31■■□□□ 1.96
HCFC1R1-209ENST00000576921 ZC3H4Q9UPT8 1303 aaKnown RBP27.31■■□□□ 1.96
HCFC1R1-209ENST00000576921 OLFM4Q6UX06 510 aa27.3■■□□□ 1.96
HCFC1R1-209ENST00000576921 C3orf67Q6ZVT6 689 aa27.3■■□□□ 1.96
HCFC1R1-209ENST00000576921 C7orf43Q8WVR3 580 aa27.3■■□□□ 1.96
HCFC1R1-209ENST00000576921 RNF123Q5XPI4 1314 aa27.3■■□□□ 1.96
HCFC1R1-209ENST00000576921 LTBP3Q9NS15 1303 aa27.3■■□□□ 1.96
HCFC1R1-209ENST00000576921 GOLGA2Q08379 1002 aa27.29■■□□□ 1.96
HCFC1R1-209ENST00000576921 PHAXQ9H814 394 aaKnown RBP27.29■■□□□ 1.96
HCFC1R1-209ENST00000576921 TRMT112Q9UI30 125 aaKnown RBP27.29■■□□□ 1.96
HCFC1R1-209ENST00000576921 IL16Q14005 1332 aa27.29■■□□□ 1.96
HCFC1R1-209ENST00000576921 DDX60Q8IY21 1712 aaKnown RBP27.29■■□□□ 1.96
HCFC1R1-209ENST00000576921 ATP5J2-PTCD1G3V325 749 aa27.28■■□□□ 1.96
HCFC1R1-209ENST00000576921 NCBP3Q53F19 620 aaKnown RBP27.28■■□□□ 1.96
HCFC1R1-209ENST00000576921 CCDC30Q5VVM6 783 aa27.28■■□□□ 1.96
HCFC1R1-209ENST00000576921 RBM17Q96I25 401 aaKnown RBP27.28■■□□□ 1.96
HCFC1R1-209ENST00000576921 NLRP3Q96P20 1036 aa27.28■■□□□ 1.96
HCFC1R1-209ENST00000576921 RIC3Q7Z5B4 369 aa27.27■■□□□ 1.96
HCFC1R1-209ENST00000576921 SH3TC1Q8TE82 1336 aa27.26■■□□□ 1.95
HCFC1R1-209ENST00000576921 HCLS1P14317 486 aaPredicted RBP27.26■■□□□ 1.95
HCFC1R1-209ENST00000576921 SYNE4Q8N205 404 aa27.26■■□□□ 1.95
HCFC1R1-209ENST00000576921 CHMP4AQ9BY43 222 aa27.26■■□□□ 1.95
HCFC1R1-209ENST00000576921 FANCIQ9NVI1 1328 aa27.25■■□□□ 1.95
HCFC1R1-209ENST00000576921 HOXA10P31260 410 aaPredicted RBP27.25■■□□□ 1.95
HCFC1R1-209ENST00000576921 TCERG1O14776 1098 aaKnown RBP27.24■■□□□ 1.95
HCFC1R1-209ENST00000576921 FKBP4Q02790 459 aaKnown RBP eCLIP27.24■■□□□ 1.95
HCFC1R1-209ENST00000576921 TWISTNBQ3B726 338 aaPredicted RBP27.24■■□□□ 1.95
HCFC1R1-209ENST00000576921 SLC10A5Q5PT55 438 aa27.24■■□□□ 1.95
HCFC1R1-209ENST00000576921 ISCA1Q9BUE6 129 aa27.24■■□□□ 1.95
HCFC1R1-209ENST00000576921 TAF1P21675 1872 aa27.23■■□□□ 1.95
HCFC1R1-209ENST00000576921 PPEF1O14829 653 aaPredicted RBP27.23■■□□□ 1.95
HCFC1R1-209ENST00000576921 WDR63Q8IWG1 891 aa27.23■■□□□ 1.95
HCFC1R1-209ENST00000576921 C16orf71Q8IYS4 520 aaPredicted RBP27.23■■□□□ 1.95
HCFC1R1-209ENST00000576921 RTKN2Q8IZC4 609 aa27.23■■□□□ 1.95
HCFC1R1-209ENST00000576921 CRAMP1Q96RY5 1269 aa27.23■■□□□ 1.95
HCFC1R1-209ENST00000576921 STK31Q9BXU1 1019 aa27.23■■□□□ 1.95
HCFC1R1-209ENST00000576921 RRAGCQ9HB90 399 aa27.23■■□□□ 1.95
HCFC1R1-209ENST00000576921 GLTPD2A6NH11 291 aa27.22■■□□□ 1.95
HCFC1R1-209ENST00000576921 ZNF277Q9NRM2 450 aaPredicted RBP27.22■■□□□ 1.95
HCFC1R1-209ENST00000576921 DDX58O95786 925 aaKnown RBP27.2■■□□□ 1.94
HCFC1R1-209ENST00000576921 RTL5Q5HYW3 569 aaPredicted RBP27.2■■□□□ 1.94
HCFC1R1-209ENST00000576921 SLC51AQ86UW1 340 aa27.2■■□□□ 1.94
HCFC1R1-209ENST00000576921 FAM89AQ96GI7 184 aa27.2■■□□□ 1.94
HCFC1R1-209ENST00000576921 MYD88Q99836 296 aa27.2■■□□□ 1.94
HCFC1R1-209ENST00000576921 ABCC4O15439 1325 aa27.19■■□□□ 1.94
HCFC1R1-209ENST00000576921 CACNA1FO60840 1977 aa27.19■■□□□ 1.94
HCFC1R1-209ENST00000576921 TOMM70O94826 608 aa27.19■■□□□ 1.94
HCFC1R1-209ENST00000576921 WDR90Q96KV7 1748 aa27.19■■□□□ 1.94
HCFC1R1-209ENST00000576921 SNED1Q8TER0 1413 aa27.18■■□□□ 1.94
HCFC1R1-209ENST00000576921 DPY19L2Q6NUT2 758 aa27.18■■□□□ 1.94
HCFC1R1-209ENST00000576921 CC2D2BQ6DHV5 1058 aa27.17■■□□□ 1.94
HCFC1R1-209ENST00000576921 DDX46Q7L014 1031 aaKnown RBP27.16■■□□□ 1.94
HCFC1R1-209ENST00000576921 TMX4Q9H1E5 349 aaPredicted RBP27.16■■□□□ 1.94
HCFC1R1-209ENST00000576921 IARSP41252 1262 aaKnown RBP27.15■■□□□ 1.94
HCFC1R1-209ENST00000576921 EXOSC9Q06265 439 aaKnown RBP27.15■■□□□ 1.94
HCFC1R1-209ENST00000576921 TRIM28Q13263 835 aaKnown RBP27.15■■□□□ 1.94
HCFC1R1-209ENST00000576921 PSMD1Q99460 953 aa27.15■■□□□ 1.94
HCFC1R1-209ENST00000576921 SPINK5Q9NQ38 1064 aaPredicted RBP27.15■■□□□ 1.94
HCFC1R1-209ENST00000576921 MAP3K2Q9Y2U5 619 aa27.15■■□□□ 1.94
HCFC1R1-209ENST00000576921 CEP350Q5VT06 3117 aa27.13■■□□□ 1.93
HCFC1R1-209ENST00000576921 IRS4O14654 1257 aaPredicted RBP27.13■■□□□ 1.93
HCFC1R1-209ENST00000576921 SLC4A2P04920 1241 aa27.13■■□□□ 1.93
HCFC1R1-209ENST00000576921 VEGFAP15692 232 aaPredicted RBP27.13■■□□□ 1.93
HCFC1R1-209ENST00000576921 METTL22Q9BUU2 404 aaPredicted RBP27.13■■□□□ 1.93
HCFC1R1-209ENST00000576921 MYH16Q9H6N6 1097 aa27.13■■□□□ 1.93
HCFC1R1-209ENST00000576921 ATP6V0A2Q9Y487 856 aa27.13■■□□□ 1.93
HCFC1R1-209ENST00000576921 PI4KAP2A4QPH2 592 aa27.12■■□□□ 1.93
HCFC1R1-209ENST00000576921 HSPA6P17066 643 aa27.12■■□□□ 1.93
HCFC1R1-209ENST00000576921 G2E3Q7L622 706 aa27.12■■□□□ 1.93
HCFC1R1-209ENST00000576921 PI4KAP1Q8N8J0 262 aa27.12■■□□□ 1.93
HCFC1R1-209ENST00000576921 RBM46Q8TBY0 533 aaKnown RBP27.12■■□□□ 1.93
HCFC1R1-209ENST00000576921 CWC25Q9NXE8 425 aaPredicted RBP27.12■■□□□ 1.93
HCFC1R1-209ENST00000576921 LRRC37AA6NMS7 1700 aa27.11■■□□□ 1.93
HCFC1R1-209ENST00000576921 DDNO94850 711 aaPredicted RBP27.11■■□□□ 1.93
HCFC1R1-209ENST00000576921 GRAPQ13588 217 aa27.11■■□□□ 1.93
HCFC1R1-209ENST00000576921 GRIPAP1Q4V328 841 aa27.11■■□□□ 1.93
HCFC1R1-209ENST00000576921 KSR2Q6VAB6 950 aa27.11■■□□□ 1.93
HCFC1R1-209ENST00000576921 ZBTB38Q8NAP3 1195 aaPredicted RBP27.11■■□□□ 1.93
HCFC1R1-209ENST00000576921 CCDC191Q8NCU4 936 aa27.11■■□□□ 1.93
HCFC1R1-209ENST00000576921 GRAPLQ8TC17 118 aaPredicted RBP27.11■■□□□ 1.93
HCFC1R1-209ENST00000576921 COL4A5P29400 1685 aa27.1■■□□□ 1.93
HCFC1R1-209ENST00000576921 ZNF541Q9H0D2 1346 aa27.1■■□□□ 1.93
HCFC1R1-209ENST00000576921 COL4A1P02462 1669 aa27.09■■□□□ 1.93
HCFC1R1-209ENST00000576921 BBOX1O75936 387 aa27.09■■□□□ 1.93
HCFC1R1-209ENST00000576921 JARID2Q92833 1246 aaPredicted RBP27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms