RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 C4BP0C0L5 1744 aa12.51□□□□□ -0.41
NPLOC4-219ENST00000576713 COL5A3P25940 1745 aaPredicted RBP12.51□□□□□ -0.41
NPLOC4-219ENST00000576713 BRPF1P55201 1214 aaPredicted RBP12.51□□□□□ -0.41
NPLOC4-219ENST00000576713 SLC15A2Q16348 729 aa12.51□□□□□ -0.41
NPLOC4-219ENST00000576713 SLC27A3Q5K4L6 730 aa12.51□□□□□ -0.41
NPLOC4-219ENST00000576713 HS3ST6Q96QI5 342 aa12.51□□□□□ -0.41
NPLOC4-219ENST00000576713 MIS18AQ9NYP9 233 aa12.51□□□□□ -0.41
NPLOC4-219ENST00000576713 CICQ96RK0 1608 aaPredicted RBP12.51□□□□□ -0.41
NPLOC4-219ENST00000576713 ZNF831Q5JPB2 1677 aa12.51□□□□□ -0.41
NPLOC4-219ENST00000576713 ARHGAP33O14559 1287 aa12.5□□□□□ -0.41
NPLOC4-219ENST00000576713 PSEN2P49810 448 aa12.5□□□□□ -0.41
NPLOC4-219ENST00000576713 RIPK4P57078 832 aa12.5□□□□□ -0.41
NPLOC4-219ENST00000576713 NEUROD2Q15784 382 aa12.5□□□□□ -0.41
NPLOC4-219ENST00000576713 DIEXFQ68CQ4 756 aaKnown RBP12.5□□□□□ -0.41
NPLOC4-219ENST00000576713 SMARCC1Q92922 1105 aaPredicted RBP12.5□□□□□ -0.41
NPLOC4-219ENST00000576713 FAM198AQ9UFP1 575 aa12.5□□□□□ -0.41
NPLOC4-219ENST00000576713 APAF1O14727 1248 aa12.49□□□□□ -0.41
NPLOC4-219ENST00000576713 HTATSF1O43719 755 aaKnown RBP12.49□□□□□ -0.41
NPLOC4-219ENST00000576713 TEFQ10587 303 aa12.49□□□□□ -0.41
NPLOC4-219ENST00000576713 KDM3BQ7LBC6 1761 aa12.48□□□□□ -0.41
NPLOC4-219ENST00000576713 GOLGB1Q14789 3259 aaKnown RBP12.48□□□□□ -0.41
NPLOC4-219ENST00000576713 PNPLA7Q6ZV29 1317 aa12.48□□□□□ -0.41
NPLOC4-219ENST00000576713 ATP6V1AP38606 617 aa12.48□□□□□ -0.41
NPLOC4-219ENST00000576713 PDE4DQ08499 809 aa12.48□□□□□ -0.41
NPLOC4-219ENST00000576713 FAM161AQ3B820 660 aa12.48□□□□□ -0.41
NPLOC4-219ENST00000576713 RTF1Q92541 710 aaKnown RBP12.48□□□□□ -0.41
NPLOC4-219ENST00000576713 ZNF496Q96IT1 587 aaPredicted RBP12.48□□□□□ -0.41
NPLOC4-219ENST00000576713 TSKSQ9UJT2 592 aa12.48□□□□□ -0.41
NPLOC4-219ENST00000576713 PRAMEF22A3QJZ6 481 aa12.47□□□□□ -0.41
NPLOC4-219ENST00000576713 PBX2P40425 430 aa12.47□□□□□ -0.41
NPLOC4-219ENST00000576713 ZNF790Q6PG37 636 aa12.47□□□□□ -0.41
NPLOC4-219ENST00000576713 DNAJC10Q8IXB1 793 aa12.47□□□□□ -0.41
NPLOC4-219ENST00000576713 FAM9BQ8IZU0 186 aa12.47□□□□□ -0.41
NPLOC4-219ENST00000576713 PNNQ9H307 717 aaKnown RBP12.47□□□□□ -0.41
NPLOC4-219ENST00000576713 STK32BQ9NY57 414 aa12.47□□□□□ -0.41
NPLOC4-219ENST00000576713 ADGRG1Q9Y653 693 aa12.47□□□□□ -0.41
NPLOC4-219ENST00000576713 QSER1Q2KHR3 1735 aa12.46□□□□□ -0.41
NPLOC4-219ENST00000576713 BTBD11A6QL63 1104 aa12.46□□□□□ -0.41
NPLOC4-219ENST00000576713 TRIM6-TRIM34B2RNG4 842 aa12.46□□□□□ -0.41
NPLOC4-219ENST00000576713 AMHR2Q16671 573 aa12.46□□□□□ -0.41
NPLOC4-219ENST00000576713 ZBED2Q9BTP6 218 aa12.46□□□□□ -0.41
NPLOC4-219ENST00000576713 UBR3Q6ZT12 1888 aa12.46□□□□□ -0.42
NPLOC4-219ENST00000576713 MYH14Q7Z406 1995 aaKnown RBP12.45□□□□□ -0.42
NPLOC4-219ENST00000576713 OATP04181 439 aa12.45□□□□□ -0.42
NPLOC4-219ENST00000576713 NEFMP07197 916 aa12.45□□□□□ -0.42
NPLOC4-219ENST00000576713 PROX2Q3B8N5 592 aa12.45□□□□□ -0.42
NPLOC4-219ENST00000576713 COL23A1Q86Y22 540 aaPredicted RBP12.45□□□□□ -0.42
NPLOC4-219ENST00000576713 HEG1Q9ULI3 1381 aa12.44□□□□□ -0.42
NPLOC4-219ENST00000576713 TAF7Q15545 349 aaPredicted RBP12.44□□□□□ -0.42
NPLOC4-219ENST00000576713 DMRTA1Q5VZB9 504 aa12.44□□□□□ -0.42
NPLOC4-219ENST00000576713 INTS5Q6P9B9 1019 aaKnown RBP12.44□□□□□ -0.42
NPLOC4-219ENST00000576713 TFCP2L1Q9NZI6 479 aa12.44□□□□□ -0.42
NPLOC4-219ENST00000576713 ZBTB7AO95365 584 aa12.43□□□□□ -0.42
NPLOC4-219ENST00000576713 CYP19A1P11511 503 aaPredicted RBP12.43□□□□□ -0.42
NPLOC4-219ENST00000576713 CRKLP46109 303 aaKnown RBP12.43□□□□□ -0.42
NPLOC4-219ENST00000576713 METTL3Q86U44 580 aaKnown RBP12.43□□□□□ -0.42
NPLOC4-219ENST00000576713 PXYLP1Q8TE99 480 aa12.43□□□□□ -0.42
NPLOC4-219ENST00000576713 PHOX2BQ99453 314 aa12.43□□□□□ -0.42
NPLOC4-219ENST00000576713 UTRNP46939 3433 aa12.43□□□□□ -0.42
NPLOC4-219ENST00000576713 CNTNAP4Q9C0A0 1308 aa12.42□□□□□ -0.42
NPLOC4-219ENST00000576713 CCER2I3L3R5 266 aa12.42□□□□□ -0.42
NPLOC4-219ENST00000576713 KRT24Q2M2I5 525 aa12.42□□□□□ -0.42
NPLOC4-219ENST00000576713 TTC5Q8N0Z6 440 aa12.42□□□□□ -0.42
NPLOC4-219ENST00000576713 SPON1Q9HCB6 807 aa12.42□□□□□ -0.42
NPLOC4-219ENST00000576713 C4AP0C0L4 1744 aa12.42□□□□□ -0.42
NPLOC4-219ENST00000576713 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.41□□□□□ -0.42
NPLOC4-219ENST00000576713 C3orf80F5H4A9 247 aa12.41□□□□□ -0.42
NPLOC4-219ENST00000576713 PIP4K2AP48426 406 aaPredicted RBP12.41□□□□□ -0.42
NPLOC4-219ENST00000576713 EIF4A1P60842 406 aaKnown RBP12.41□□□□□ -0.42
NPLOC4-219ENST00000576713 PACS2Q86VP3 889 aa12.41□□□□□ -0.42
NPLOC4-219ENST00000576713 FMNL2Q96PY5 1086 aa12.41□□□□□ -0.42
NPLOC4-219ENST00000576713 SLC4A5Q9BY07 1137 aa12.41□□□□□ -0.42
NPLOC4-219ENST00000576713 GPBP1L1Q9HC44 474 aaPredicted RBP12.41□□□□□ -0.42
NPLOC4-219ENST00000576713 ZBTB1Q9Y2K1 713 aa12.41□□□□□ -0.42
NPLOC4-219ENST00000576713 SALL2Q9Y467 1007 aaPredicted RBP12.41□□□□□ -0.42
NPLOC4-219ENST00000576713 USP16Q9Y5T5 823 aa12.41□□□□□ -0.42
NPLOC4-219ENST00000576713 COL24A1Q17RW2 1714 aa12.4□□□□□ -0.42
NPLOC4-219ENST00000576713 CHL1O00533 1208 aa12.4□□□□□ -0.42
NPLOC4-219ENST00000576713 ZNF853P0CG23 659 aa12.4□□□□□ -0.42
NPLOC4-219ENST00000576713 RC3H1Q5TC82 1133 aaKnown RBP12.4□□□□□ -0.42
NPLOC4-219ENST00000576713 TSPYL4Q9UJ04 414 aa12.4□□□□□ -0.42
NPLOC4-219ENST00000576713 A1BGP04217 495 aa12.39□□□□□ -0.43
NPLOC4-219ENST00000576713 LMOD3Q0VAK6 560 aa12.39□□□□□ -0.43
NPLOC4-219ENST00000576713 MSL1Q68DK7 614 aa12.39□□□□□ -0.43
NPLOC4-219ENST00000576713 WWC1Q8IX03 1113 aa12.39□□□□□ -0.43
NPLOC4-219ENST00000576713 PARP9Q8IXQ6 854 aa12.39□□□□□ -0.43
NPLOC4-219ENST00000576713 RBM46Q8TBY0 533 aaKnown RBP12.39□□□□□ -0.43
NPLOC4-219ENST00000576713 TATDN2Q93075 761 aa12.39□□□□□ -0.43
NPLOC4-219ENST00000576713 CCDC87Q9NVE4 849 aa12.39□□□□□ -0.43
NPLOC4-219ENST00000576713 LAS1LQ9Y4W2 734 aaKnown RBP12.39□□□□□ -0.43
NPLOC4-219ENST00000576713 SOS1Q07889 1333 aaPredicted RBP12.38□□□□□ -0.43
NPLOC4-219ENST00000576713 LAMB4A4D0S4 1761 aa12.38□□□□□ -0.43
NPLOC4-219ENST00000576713 NBPF26B4DH59 902 aa12.38□□□□□ -0.43
NPLOC4-219ENST00000576713 GIGYF1O75420 1035 aaPredicted RBP12.38□□□□□ -0.43
NPLOC4-219ENST00000576713 RPS6KA4O75676 772 aa12.38□□□□□ -0.43
NPLOC4-219ENST00000576713 NBPF10Q6P3W6 841 aaKnown RBP12.38□□□□□ -0.43
NPLOC4-219ENST00000576713 NUDT18Q6ZVK8 323 aa12.38□□□□□ -0.43
NPLOC4-219ENST00000576713 NBPF15Q8N660 670 aa12.38□□□□□ -0.43
NPLOC4-219ENST00000576713 KIAA1468Q9P260 1216 aa12.38□□□□□ -0.43
NPLOC4-219ENST00000576713 CANXP27824 592 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms