RNA–Protein interactions for RNA: ENST00000575882.5

TOM1L1-221, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TOM1L1, Length 2,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-221ENST00000575882 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.54■□□□□ 0.88
TOM1L1-221ENST00000575882 SETD1BQ9UPS6 1966 aaKnown RBP20.54■□□□□ 0.88
TOM1L1-221ENST00000575882 LARP1BQ659C4 914 aaKnown RBP20.54■□□□□ 0.88
TOM1L1-221ENST00000575882 SUCLG2Q96I99 432 aa20.54■□□□□ 0.88
TOM1L1-221ENST00000575882 HIP1O00291 1037 aa20.53■□□□□ 0.88
TOM1L1-221ENST00000575882 SLC27A2O14975 620 aa20.53■□□□□ 0.88
TOM1L1-221ENST00000575882 AP5Z1O43299 807 aa20.53■□□□□ 0.88
TOM1L1-221ENST00000575882 SASH1O94885 1247 aa20.53■□□□□ 0.88
TOM1L1-221ENST00000575882 EAF2Q96CJ1 260 aaPredicted RBP20.53■□□□□ 0.88
TOM1L1-221ENST00000575882 PRAMEF22A3QJZ6 481 aa20.53■□□□□ 0.88
TOM1L1-221ENST00000575882 COL9A3Q14050 684 aaPredicted RBP20.53■□□□□ 0.88
TOM1L1-221ENST00000575882 C1orf141Q5JVX7 400 aa20.53■□□□□ 0.88
TOM1L1-221ENST00000575882 CCDC8Q9H0W5 538 aaPredicted RBP20.53■□□□□ 0.88
TOM1L1-221ENST00000575882 RGPD2P0DJD1 1756 aa20.53■□□□□ 0.88
TOM1L1-221ENST00000575882 PXDNQ92626 1479 aa20.52■□□□□ 0.88
TOM1L1-221ENST00000575882 PSMA5P28066 241 aa20.52■□□□□ 0.88
TOM1L1-221ENST00000575882 G3BP1Q13283 466 aaKnown RBP eCLIP20.52■□□□□ 0.88
TOM1L1-221ENST00000575882 CDC37L1Q7L3B6 337 aa20.52■□□□□ 0.88
TOM1L1-221ENST00000575882 PRIMPOLQ96LW4 560 aa20.52■□□□□ 0.88
TOM1L1-221ENST00000575882 GRM8O00222 908 aa20.52■□□□□ 0.87
TOM1L1-221ENST00000575882 CCDC192P0DO97 292 aa20.52■□□□□ 0.87
TOM1L1-221ENST00000575882 KRT85P78386 507 aa20.52■□□□□ 0.87
TOM1L1-221ENST00000575882 AMOTQ4VCS5 1084 aa20.52■□□□□ 0.87
TOM1L1-221ENST00000575882 TTC6Q86TZ1 520 aa20.52■□□□□ 0.87
TOM1L1-221ENST00000575882 FERMT3Q86UX7 667 aa20.52■□□□□ 0.87
TOM1L1-221ENST00000575882 KAZALD1Q96I82 304 aa20.52■□□□□ 0.87
TOM1L1-221ENST00000575882 BICC1Q9H694 974 aaKnown RBP20.52■□□□□ 0.87
TOM1L1-221ENST00000575882 SPTLC3Q9NUV7 552 aa20.52■□□□□ 0.87
TOM1L1-221ENST00000575882 ADGRL3Q9HAR2 1447 aa20.51■□□□□ 0.87
TOM1L1-221ENST00000575882 LINS1Q8NG48 757 aa20.51■□□□□ 0.87
TOM1L1-221ENST00000575882 TLR7Q9NYK1 1049 aaKnown RBP20.51■□□□□ 0.87
TOM1L1-221ENST00000575882 A0A0D9SFI3 127 aa20.51■□□□□ 0.87
TOM1L1-221ENST00000575882 KCNH5Q8NCM2 988 aa20.51■□□□□ 0.87
TOM1L1-221ENST00000575882 TCEANC2Q96MN5 208 aa20.5■□□□□ 0.87
TOM1L1-221ENST00000575882 FSD1Q9BTV5 496 aa20.5■□□□□ 0.87
TOM1L1-221ENST00000575882 CHMP3Q9Y3E7 222 aa20.5■□□□□ 0.87
TOM1L1-221ENST00000575882 NCAPD2Q15021 1401 aa20.5■□□□□ 0.87
TOM1L1-221ENST00000575882 CHD2O14647 1828 aaKnown RBP20.5■□□□□ 0.87
TOM1L1-221ENST00000575882 HMGN5P82970 282 aaKnown RBP20.5■□□□□ 0.87
TOM1L1-221ENST00000575882 FAM173BQ6P4H8 233 aa20.5■□□□□ 0.87
TOM1L1-221ENST00000575882 BLOC1S2Q6QNY1 142 aa20.5■□□□□ 0.87
TOM1L1-221ENST00000575882 BOLA2Q9H3K6 86 aa20.5■□□□□ 0.87
TOM1L1-221ENST00000575882 SNRKQ9NRH2 765 aa20.5■□□□□ 0.87
TOM1L1-221ENST00000575882 PDCP20941 246 aa20.49■□□□□ 0.87
TOM1L1-221ENST00000575882 ARID3AQ99856 593 aa20.49■□□□□ 0.87
TOM1L1-221ENST00000575882 SIL1Q9H173 461 aa20.49■□□□□ 0.87
TOM1L1-221ENST00000575882 HEG1Q9ULI3 1381 aa20.49■□□□□ 0.87
TOM1L1-221ENST00000575882 PDIA4P13667 645 aaKnown RBP20.49■□□□□ 0.87
TOM1L1-221ENST00000575882 PSME1Q06323 249 aa20.49■□□□□ 0.87
TOM1L1-221ENST00000575882 RNF20Q5VTR2 975 aa20.49■□□□□ 0.87
TOM1L1-221ENST00000575882 JARID2Q92833 1246 aaPredicted RBP20.49■□□□□ 0.87
TOM1L1-221ENST00000575882 UTYO14607 1347 aa20.49■□□□□ 0.87
TOM1L1-221ENST00000575882 AIMP1Q12904 312 aaKnown RBP20.48■□□□□ 0.87
TOM1L1-221ENST00000575882 ANKRD1Q15327 319 aa20.48■□□□□ 0.87
TOM1L1-221ENST00000575882 RBM33Q96EV2 1170 aaKnown RBP20.48■□□□□ 0.87
TOM1L1-221ENST00000575882 NUP62CLQ9H1M0 184 aa20.48■□□□□ 0.87
TOM1L1-221ENST00000575882 TAF6LQ9Y6J9 622 aa20.48■□□□□ 0.87
TOM1L1-221ENST00000575882 LIG1P18858 919 aa20.48■□□□□ 0.87
TOM1L1-221ENST00000575882 MAP3K11Q16584 847 aa20.48■□□□□ 0.87
TOM1L1-221ENST00000575882 SPC24Q8NBT2 197 aa20.48■□□□□ 0.87
TOM1L1-221ENST00000575882 KCNF1Q9H3M0 494 aa20.48■□□□□ 0.87
TOM1L1-221ENST00000575882 ELP1O95163 1332 aa20.48■□□□□ 0.87
TOM1L1-221ENST00000575882 NPHP4O75161 1426 aaPredicted RBP20.48■□□□□ 0.87
TOM1L1-221ENST00000575882 DDX58O95786 925 aaKnown RBP20.47■□□□□ 0.87
TOM1L1-221ENST00000575882 RPS6KB1P23443 525 aa20.47■□□□□ 0.87
TOM1L1-221ENST00000575882 CAMK4Q16566 473 aa20.47■□□□□ 0.87
TOM1L1-221ENST00000575882 OVOS2A0A0G2JMS6 1433 aa20.47■□□□□ 0.87
TOM1L1-221ENST00000575882 MED23Q9ULK4 1368 aa20.47■□□□□ 0.87
TOM1L1-221ENST00000575882 FAM200AQ8TCP9 573 aa20.47■□□□□ 0.87
TOM1L1-221ENST00000575882 ESCO1Q5FWF5 840 aa20.46■□□□□ 0.87
TOM1L1-221ENST00000575882 TSC1Q92574 1164 aa20.46■□□□□ 0.87
TOM1L1-221ENST00000575882 TPM3P06753 285 aa20.46■□□□□ 0.87
TOM1L1-221ENST00000575882 TOB2Q14106 344 aaPredicted RBP20.46■□□□□ 0.87
TOM1L1-221ENST00000575882 KIAA1524Q8TCG1 905 aa20.46■□□□□ 0.87
TOM1L1-221ENST00000575882 PYCARDQ9ULZ3 195 aa20.46■□□□□ 0.87
TOM1L1-221ENST00000575882 MRVI1Q9Y6F6 885 aa20.46■□□□□ 0.87
TOM1L1-221ENST00000575882 GTF2F1P35269 517 aaKnown RBP eCLIP20.45■□□□□ 0.86
TOM1L1-221ENST00000575882 TYRO3Q06418 890 aa20.45■□□□□ 0.86
TOM1L1-221ENST00000575882 ZNF589Q86UQ0 364 aaPredicted RBP20.45■□□□□ 0.86
TOM1L1-221ENST00000575882 KLHDC4Q8TBB5 520 aa20.45■□□□□ 0.86
TOM1L1-221ENST00000575882 DDX21Q9NR30 783 aaKnown RBP eCLIP20.45■□□□□ 0.86
TOM1L1-221ENST00000575882 GOLGA6L6A8MZA4 724 aa20.45■□□□□ 0.86
TOM1L1-221ENST00000575882 LARP1Q6PKG0 1096 aaKnown RBP20.45■□□□□ 0.86
TOM1L1-221ENST00000575882 PHRF1Q9P1Y6 1649 aaKnown RBP20.44■□□□□ 0.86
TOM1L1-221ENST00000575882 STK3Q13188 491 aa20.44■□□□□ 0.86
TOM1L1-221ENST00000575882 ALDH8A1Q9H2A2 487 aaPredicted RBP20.44■□□□□ 0.86
TOM1L1-221ENST00000575882 IGKV5-2P06315 115 aa20.44■□□□□ 0.86
TOM1L1-221ENST00000575882 SPATA32Q96LK8 384 aa20.44■□□□□ 0.86
TOM1L1-221ENST00000575882 SCAND2PQ9GZW5 306 aaPredicted RBP20.44■□□□□ 0.86
TOM1L1-221ENST00000575882 TNMDQ9H2S6 317 aa20.44■□□□□ 0.86
TOM1L1-221ENST00000575882 DACT1Q9NYF0 836 aa20.44■□□□□ 0.86
TOM1L1-221ENST00000575882 TFIP11Q9UBB9 837 aaKnown RBP20.44■□□□□ 0.86
TOM1L1-221ENST00000575882 GOLGA6L4A6NEF3 574 aa20.43■□□□□ 0.86
TOM1L1-221ENST00000575882 CKAP2LQ8IYA6 745 aa20.43■□□□□ 0.86
TOM1L1-221ENST00000575882 FER1L4A9Z1Z3 1794 aa20.43■□□□□ 0.86
TOM1L1-221ENST00000575882 PDIA6Q15084 440 aa20.43■□□□□ 0.86
TOM1L1-221ENST00000575882 RIC3Q7Z5B4 369 aa20.43■□□□□ 0.86
TOM1L1-221ENST00000575882 LUZP1Q86V48 1076 aa20.43■□□□□ 0.86
TOM1L1-221ENST00000575882 HMG20BQ9P0W2 317 aa20.43■□□□□ 0.86
TOM1L1-221ENST00000575882 JCADQ9P266 1359 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms