RNA–Protein interactions for RNA: ENST00000574217.1

PRPF8-210, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 310 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-210ENST00000574217 TNNQ9UQP3 1299 aa8.48□□□□□ -1.05
PRPF8-210ENST00000574217 NIP7Q9Y221 180 aaKnown RBP eCLIP8.48□□□□□ -1.05
PRPF8-210ENST00000574217 ANKRD31Q8N7Z5 1873 aa8.48□□□□□ -1.05
PRPF8-210ENST00000574217 CARMIL3Q8ND23 1372 aa8.48□□□□□ -1.05
PRPF8-210ENST00000574217 C10orf71Q711Q0 1435 aa8.47□□□□□ -1.05
PRPF8-210ENST00000574217 FAM177BA6PVY3 158 aa8.47□□□□□ -1.05
PRPF8-210ENST00000574217 RLBP1P12271 317 aa8.47□□□□□ -1.05
PRPF8-210ENST00000574217 CCT4P50991 539 aaKnown RBP8.47□□□□□ -1.05
PRPF8-210ENST00000574217 TCIRG1Q13488 830 aa8.47□□□□□ -1.05
PRPF8-210ENST00000574217 HSP90AB3PQ58FF7 597 aa8.47□□□□□ -1.05
PRPF8-210ENST00000574217 C20orf194Q5TEA3 1177 aa8.47□□□□□ -1.05
PRPF8-210ENST00000574217 INTS3Q68E01 1043 aaKnown RBP8.47□□□□□ -1.05
PRPF8-210ENST00000574217 POTEDQ86YR6 584 aa8.47□□□□□ -1.05
PRPF8-210ENST00000574217 ITPRIPQ8IWB1 547 aa8.47□□□□□ -1.05
PRPF8-210ENST00000574217 ZNF34Q8IZ26 560 aa8.47□□□□□ -1.05
PRPF8-210ENST00000574217 CCDC24Q8N4L8 307 aa8.47□□□□□ -1.05
PRPF8-210ENST00000574217 TMEM57Q8N5G2 664 aa8.47□□□□□ -1.05
PRPF8-210ENST00000574217 NLGN2Q8NFZ4 835 aa8.47□□□□□ -1.05
PRPF8-210ENST00000574217 SYT17Q9BSW7 474 aa8.47□□□□□ -1.05
PRPF8-210ENST00000574217 METTL22Q9BUU2 404 aaPredicted RBP8.47□□□□□ -1.05
PRPF8-210ENST00000574217 UBN2Q6ZU65 1347 aa8.47□□□□□ -1.05
PRPF8-210ENST00000574217 MVPQ14764 893 aaKnown RBP8.46□□□□□ -1.06
PRPF8-210ENST00000574217 BEND3Q5T5X7 828 aa8.46□□□□□ -1.06
PRPF8-210ENST00000574217 SUSD4Q5VX71 490 aa8.46□□□□□ -1.06
PRPF8-210ENST00000574217 PRR5LQ6MZQ0 368 aa8.46□□□□□ -1.06
PRPF8-210ENST00000574217 NBPF5PQ86XG9 351 aaPredicted RBP8.46□□□□□ -1.06
PRPF8-210ENST00000574217 LINS1Q8NG48 757 aa8.46□□□□□ -1.06
PRPF8-210ENST00000574217 MYD88Q99836 296 aa8.46□□□□□ -1.06
PRPF8-210ENST00000574217 SRCIN1Q9C0H9 1055 aa8.46□□□□□ -1.06
PRPF8-210ENST00000574217 COG6Q9Y2V7 657 aa8.46□□□□□ -1.06
PRPF8-210ENST00000574217 CD2APQ9Y5K6 639 aa8.46□□□□□ -1.06
PRPF8-210ENST00000574217 ATP5J2-PTCD1G3V325 749 aa8.45□□□□□ -1.06
PRPF8-210ENST00000574217 NPHP1O15259 732 aa8.45□□□□□ -1.06
PRPF8-210ENST00000574217 IRX6P78412 446 aaPredicted RBP8.45□□□□□ -1.06
PRPF8-210ENST00000574217 CWF19L2Q2TBE0 894 aaKnown RBP8.45□□□□□ -1.06
PRPF8-210ENST00000574217 CNBD1Q8NA66 436 aa8.45□□□□□ -1.06
PRPF8-210ENST00000574217 ISCA1Q9BUE6 129 aa8.45□□□□□ -1.06
PRPF8-210ENST00000574217 DDX19BQ9UMR2 479 aa8.45□□□□□ -1.06
PRPF8-210ENST00000574217 COL11A2P13942 1736 aaPredicted RBP8.45□□□□□ -1.06
PRPF8-210ENST00000574217 BRCA1P38398 1863 aaKnown RBP8.45□□□□□ -1.06
PRPF8-210ENST00000574217 SRCAPQ6ZRS2 3230 aa8.44□□□□□ -1.06
PRPF8-210ENST00000574217 TNRC6CQ9HCJ0 1690 aaKnown RBP8.44□□□□□ -1.06
PRPF8-210ENST00000574217 LAMB2P55268 1798 aa8.44□□□□□ -1.06
PRPF8-210ENST00000574217 DLEC1Q9Y238 1755 aa8.44□□□□□ -1.06
PRPF8-210ENST00000574217 NEURL1BA8MQ27 555 aa8.44□□□□□ -1.06
PRPF8-210ENST00000574217 ALDH1L1O75891 902 aa8.44□□□□□ -1.06
PRPF8-210ENST00000574217 NTSR2O95665 410 aa8.44□□□□□ -1.06
PRPF8-210ENST00000574217 IGKV5-2P06315 115 aa8.44□□□□□ -1.06
PRPF8-210ENST00000574217 ST5P78524 1137 aa8.44□□□□□ -1.06
PRPF8-210ENST00000574217 TRIM28Q13263 835 aaKnown RBP8.44□□□□□ -1.06
PRPF8-210ENST00000574217 ERFEQ4G0M1 354 aa8.44□□□□□ -1.06
PRPF8-210ENST00000574217 PARP10Q53GL7 1025 aa8.44□□□□□ -1.06
PRPF8-210ENST00000574217 TPTE2Q6XPS3 522 aa8.44□□□□□ -1.06
PRPF8-210ENST00000574217 PPP1R42Q7Z4L9 355 aa8.44□□□□□ -1.06
PRPF8-210ENST00000574217 NLRP10Q86W26 655 aa8.44□□□□□ -1.06
PRPF8-210ENST00000574217 NUTM1Q86Y26 1132 aa8.44□□□□□ -1.06
PRPF8-210ENST00000574217 CCDC191Q8NCU4 936 aa8.44□□□□□ -1.06
PRPF8-210ENST00000574217 CRBNQ96SW2 442 aa8.44□□□□□ -1.06
PRPF8-210ENST00000574217 NYXQ9GZU5 481 aa8.44□□□□□ -1.06
PRPF8-210ENST00000574217 CHMP4BQ9H444 224 aaKnown RBP8.44□□□□□ -1.06
PRPF8-210ENST00000574217 CWC25Q9NXE8 425 aaPredicted RBP8.44□□□□□ -1.06
PRPF8-210ENST00000574217 CACNA1SQ13698 1873 aa8.44□□□□□ -1.06
PRPF8-210ENST00000574217 ABCC12Q96J65 1359 aa8.44□□□□□ -1.06
PRPF8-210ENST00000574217 IBTKQ9P2D0 1353 aaPredicted RBP8.44□□□□□ -1.06
PRPF8-210ENST00000574217 DDX60Q8IY21 1712 aaKnown RBP8.43□□□□□ -1.06
PRPF8-210ENST00000574217 A0A0G2JLW4 131 aa8.43□□□□□ -1.06
PRPF8-210ENST00000574217 DPEP1P16444 411 aa8.43□□□□□ -1.06
PRPF8-210ENST00000574217 GTF2E1P29083 439 aaPredicted RBP8.43□□□□□ -1.06
PRPF8-210ENST00000574217 CHRNA5P30532 468 aa8.43□□□□□ -1.06
PRPF8-210ENST00000574217 TGFB2P61812 414 aa8.43□□□□□ -1.06
PRPF8-210ENST00000574217 GCKRQ14397 625 aa8.43□□□□□ -1.06
PRPF8-210ENST00000574217 UTP14AQ9BVJ6 771 aaKnown RBP8.43□□□□□ -1.06
PRPF8-210ENST00000574217 BRIP1Q9BX63 1249 aa8.43□□□□□ -1.06
PRPF8-210ENST00000574217 C9orf78Q9NZ63 289 aaPredicted RBP8.43□□□□□ -1.06
PRPF8-210ENST00000574217 WWC3Q9ULE0 1092 aa8.43□□□□□ -1.06
PRPF8-210ENST00000574217 GRM8O00222 908 aa8.42□□□□□ -1.06
PRPF8-210ENST00000574217 ZBTB7BO15156 539 aaPredicted RBP8.42□□□□□ -1.06
PRPF8-210ENST00000574217 ZBTB22O15209 634 aa8.42□□□□□ -1.06
PRPF8-210ENST00000574217 GNAI3P08754 354 aa8.42□□□□□ -1.06
PRPF8-210ENST00000574217 UBTFL1P0CB47 393 aaPredicted RBP8.42□□□□□ -1.06
PRPF8-210ENST00000574217 KCNA3P22001 575 aa8.42□□□□□ -1.06
PRPF8-210ENST00000574217 C2CD5Q86YS7 1000 aa8.42□□□□□ -1.06
PRPF8-210ENST00000574217 SYNE4Q8N205 404 aa8.42□□□□□ -1.06
PRPF8-210ENST00000574217 EXOC6Q8TAG9 804 aa8.42□□□□□ -1.06
PRPF8-210ENST00000574217 MEIS3Q99687 375 aa8.42□□□□□ -1.06
PRPF8-210ENST00000574217 TRMT112Q9UI30 125 aaKnown RBP8.42□□□□□ -1.06
PRPF8-210ENST00000574217 RIC1Q4ADV7 1423 aa8.41□□□□□ -1.06
PRPF8-210ENST00000574217 UTYO14607 1347 aa8.41□□□□□ -1.06
PRPF8-210ENST00000574217 SH3TC1Q8TE82 1336 aa8.41□□□□□ -1.06
PRPF8-210ENST00000574217 PDE6BP35913 854 aa8.41□□□□□ -1.06
PRPF8-210ENST00000574217 AAMPQ13685 434 aa8.41□□□□□ -1.06
PRPF8-210ENST00000574217 RTL5Q5HYW3 569 aaPredicted RBP8.41□□□□□ -1.06
PRPF8-210ENST00000574217 C3orf67Q6ZVT6 689 aa8.41□□□□□ -1.06
PRPF8-210ENST00000574217 PELP1Q8IZL8 1130 aaKnown RBP8.41□□□□□ -1.06
PRPF8-210ENST00000574217 JARID2Q92833 1246 aaPredicted RBP8.41□□□□□ -1.06
PRPF8-210ENST00000574217 FAM89AQ96GI7 184 aa8.41□□□□□ -1.06
PRPF8-210ENST00000574217 USP44Q9H0E7 712 aa8.41□□□□□ -1.06
PRPF8-210ENST00000574217 ZBTB40Q9NUA8 1239 aa8.41□□□□□ -1.06
PRPF8-210ENST00000574217 HDAC5Q9UQL6 1122 aa8.41□□□□□ -1.06
PRPF8-210ENST00000574217 ARFGEF1Q9Y6D6 1849 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms