RNA–Protein interactions for RNA: ENST00000572756.5

NDE1-205, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 5

Gene NDE1, Length 915 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-205ENST00000572756 C7orf43Q8WVR3 580 aa20.87■□□□□ 0.93
NDE1-205ENST00000572756 LAMB2P55268 1798 aa20.87■□□□□ 0.93
NDE1-205ENST00000572756 RNF123Q5XPI4 1314 aa20.86■□□□□ 0.93
NDE1-205ENST00000572756 FANCIQ9NVI1 1328 aa20.86■□□□□ 0.93
NDE1-205ENST00000572756 CCDC30Q5VVM6 783 aa20.86■□□□□ 0.93
NDE1-205ENST00000572756 UTP14AQ9BVJ6 771 aaKnown RBP20.86■□□□□ 0.93
NDE1-205ENST00000572756 CHMP4AQ9BY43 222 aa20.86■□□□□ 0.93
NDE1-205ENST00000572756 PHAXQ9H814 394 aaKnown RBP20.86■□□□□ 0.93
NDE1-205ENST00000572756 DICER1Q9UPY3 1922 aaKnown RBP20.86■□□□□ 0.93
NDE1-205ENST00000572756 SLC10A5Q5PT55 438 aa20.85■□□□□ 0.93
NDE1-205ENST00000572756 RNF181Q9P0P0 153 aa20.85■□□□□ 0.93
NDE1-205ENST00000572756 ZNF219Q9P2Y4 722 aaPredicted RBP20.85■□□□□ 0.93
NDE1-205ENST00000572756 C3orf67Q6ZVT6 689 aa20.84■□□□□ 0.93
NDE1-205ENST00000572756 ISCA1Q9BUE6 129 aa20.84■□□□□ 0.93
NDE1-205ENST00000572756 GPBP1L1Q9HC44 474 aaPredicted RBP20.84■□□□□ 0.93
NDE1-205ENST00000572756 SPINK5Q9NQ38 1064 aaPredicted RBP20.84■□□□□ 0.93
NDE1-205ENST00000572756 CACNA1FO60840 1977 aa20.84■□□□□ 0.93
NDE1-205ENST00000572756 TIAM2Q8IVF5 1701 aa20.84■□□□□ 0.93
NDE1-205ENST00000572756 LTBP3Q9NS15 1303 aa20.83■□□□□ 0.93
NDE1-205ENST00000572756 LMNB1P20700 586 aa20.83■□□□□ 0.93
NDE1-205ENST00000572756 HOXA10P31260 410 aaPredicted RBP20.83■□□□□ 0.93
NDE1-205ENST00000572756 TWISTNBQ3B726 338 aaPredicted RBP20.83■□□□□ 0.93
NDE1-205ENST00000572756 ZNF526Q8TF50 670 aaPredicted RBP20.83■□□□□ 0.93
NDE1-205ENST00000572756 ZNF521Q96K83 1311 aa20.82■□□□□ 0.92
NDE1-205ENST00000572756 DDX60Q8IY21 1712 aaKnown RBP20.82■□□□□ 0.92
NDE1-205ENST00000572756 ALDH1B1P30837 517 aa20.82■□□□□ 0.92
NDE1-205ENST00000572756 SOGA3Q5TF21 947 aa20.82■□□□□ 0.92
NDE1-205ENST00000572756 GOLGA2Q08379 1002 aa20.81■□□□□ 0.92
NDE1-205ENST00000572756 TRIM28Q13263 835 aaKnown RBP20.81■□□□□ 0.92
NDE1-205ENST00000572756 SYNE4Q8N205 404 aa20.81■□□□□ 0.92
NDE1-205ENST00000572756 ZC3H4Q9UPT8 1303 aaKnown RBP20.8■□□□□ 0.92
NDE1-205ENST00000572756 SNED1Q8TER0 1413 aa20.8■□□□□ 0.92
NDE1-205ENST00000572756 CCER2I3L3R5 266 aa20.8■□□□□ 0.92
NDE1-205ENST00000572756 TRMT112Q9UI30 125 aaKnown RBP20.8■□□□□ 0.92
NDE1-205ENST00000572756 SH3TC1Q8TE82 1336 aa20.79■□□□□ 0.92
NDE1-205ENST00000572756 ATP5J2-PTCD1G3V325 749 aa20.79■□□□□ 0.92
NDE1-205ENST00000572756 CCDC93Q567U6 631 aa20.79■□□□□ 0.92
NDE1-205ENST00000572756 RIC3Q7Z5B4 369 aa20.79■□□□□ 0.92
NDE1-205ENST00000572756 RPGRQ92834 1020 aaKnown RBP20.79■□□□□ 0.92
NDE1-205ENST00000572756 NLRP3Q96P20 1036 aa20.79■□□□□ 0.92
NDE1-205ENST00000572756 CRAMP1Q96RY5 1269 aa20.79■□□□□ 0.92
NDE1-205ENST00000572756 TAOK3Q9H2K8 898 aa20.79■□□□□ 0.92
NDE1-205ENST00000572756 HCLS1P14317 486 aaPredicted RBP20.78■□□□□ 0.92
NDE1-205ENST00000572756 OLFM4Q6UX06 510 aa20.78■□□□□ 0.92
NDE1-205ENST00000572756 TCERG1O14776 1098 aaKnown RBP20.77■□□□□ 0.92
NDE1-205ENST00000572756 KIF3CO14782 793 aa20.77■□□□□ 0.92
NDE1-205ENST00000572756 VAMP4O75379 141 aa20.77■□□□□ 0.92
NDE1-205ENST00000572756 C1QTNF8P60827 252 aa20.77■□□□□ 0.92
NDE1-205ENST00000572756 EXOSC9Q06265 439 aaKnown RBP20.77■□□□□ 0.92
NDE1-205ENST00000572756 RBM17Q96I25 401 aaKnown RBP20.77■□□□□ 0.92
NDE1-205ENST00000572756 STK31Q9BXU1 1019 aa20.77■□□□□ 0.92
NDE1-205ENST00000572756 DDX58O95786 925 aaKnown RBP20.76■□□□□ 0.91
NDE1-205ENST00000572756 ZNF428Q96B54 188 aa20.76■□□□□ 0.91
NDE1-205ENST00000572756 MYH16Q9H6N6 1097 aa20.76■□□□□ 0.91
NDE1-205ENST00000572756 TAF1P21675 1872 aa20.75■□□□□ 0.91
NDE1-205ENST00000572756 G2E3Q7L622 706 aa20.75■□□□□ 0.91
NDE1-205ENST00000572756 FAM89AQ96GI7 184 aa20.75■□□□□ 0.91
NDE1-205ENST00000572756 MYD88Q99836 296 aa20.75■□□□□ 0.91
NDE1-205ENST00000572756 METTL22Q9BUU2 404 aaPredicted RBP20.75■□□□□ 0.91
NDE1-205ENST00000572756 SLC4A2P04920 1241 aa20.74■□□□□ 0.91
NDE1-205ENST00000572756 FKBP4Q02790 459 aaKnown RBP eCLIP20.74■□□□□ 0.91
NDE1-205ENST00000572756 KSR2Q6VAB6 950 aa20.74■□□□□ 0.91
NDE1-205ENST00000572756 RTKN2Q8IZC4 609 aa20.74■□□□□ 0.91
NDE1-205ENST00000572756 NMRK2Q9NPI5 230 aa20.74■□□□□ 0.91
NDE1-205ENST00000572756 ABCC4O15439 1325 aa20.74■□□□□ 0.91
NDE1-205ENST00000572756 PI4KAP2A4QPH2 592 aa20.73■□□□□ 0.91
NDE1-205ENST00000572756 CC2D2BQ6DHV5 1058 aa20.73■□□□□ 0.91
NDE1-205ENST00000572756 SLC51AQ86UW1 340 aa20.73■□□□□ 0.91
NDE1-205ENST00000572756 PI4KAP1Q8N8J0 262 aa20.73■□□□□ 0.91
NDE1-205ENST00000572756 CCDC191Q8NCU4 936 aa20.73■□□□□ 0.91
NDE1-205ENST00000572756 MAP3K2Q9Y2U5 619 aa20.73■□□□□ 0.91
NDE1-205ENST00000572756 KDM2BQ8NHM5 1336 aa20.73■□□□□ 0.91
NDE1-205ENST00000572756 PPEF1O14829 653 aaPredicted RBP20.72■□□□□ 0.91
NDE1-205ENST00000572756 ZBTB38Q8NAP3 1195 aaPredicted RBP20.72■□□□□ 0.91
NDE1-205ENST00000572756 GLTPD2A6NH11 291 aa20.71■□□□□ 0.91
NDE1-205ENST00000572756 FLIIQ13045 1269 aa20.71■□□□□ 0.91
NDE1-205ENST00000572756 PSMD1Q99460 953 aa20.71■□□□□ 0.91
NDE1-205ENST00000572756 IGKV5-2P06315 115 aa20.7■□□□□ 0.9
NDE1-205ENST00000572756 SF3B3Q15393 1217 aaKnown RBP20.7■□□□□ 0.9
NDE1-205ENST00000572756 ZNF277Q9NRM2 450 aaPredicted RBP20.7■□□□□ 0.9
NDE1-205ENST00000572756 CWC25Q9NXE8 425 aaPredicted RBP20.7■□□□□ 0.9
NDE1-205ENST00000572756 LRRC37AA6NMS7 1700 aa20.7■□□□□ 0.9
NDE1-205ENST00000572756 IRS4O14654 1257 aaPredicted RBP20.69■□□□□ 0.9
NDE1-205ENST00000572756 PCCAP05165 728 aaPredicted RBP20.69■□□□□ 0.9
NDE1-205ENST00000572756 GRIPAP1Q4V328 841 aa20.69■□□□□ 0.9
NDE1-205ENST00000572756 RTL5Q5HYW3 569 aaPredicted RBP20.69■□□□□ 0.9
NDE1-205ENST00000572756 ATP6V0A2Q9Y487 856 aa20.69■□□□□ 0.9
NDE1-205ENST00000572756 COL4A1P02462 1669 aa20.69■□□□□ 0.9
NDE1-205ENST00000572756 WDR90Q96KV7 1748 aa20.69■□□□□ 0.9
NDE1-205ENST00000572756 BBOX1O75936 387 aa20.68■□□□□ 0.9
NDE1-205ENST00000572756 GRAPQ13588 217 aa20.68■□□□□ 0.9
NDE1-205ENST00000572756 DDX46Q7L014 1031 aaKnown RBP20.68■□□□□ 0.9
NDE1-205ENST00000572756 GRAPLQ8TC17 118 aaPredicted RBP20.68■□□□□ 0.9
NDE1-205ENST00000572756 DIEXFQ68CQ4 756 aaKnown RBP20.67■□□□□ 0.9
NDE1-205ENST00000572756 COL4A5P29400 1685 aa20.67■□□□□ 0.9
NDE1-205ENST00000572756 MYH3P11055 1940 aa20.66■□□□□ 0.9
NDE1-205ENST00000572756 E9PSI1 815 aa20.66■□□□□ 0.9
NDE1-205ENST00000572756 IARSP41252 1262 aaKnown RBP20.66■□□□□ 0.9
NDE1-205ENST00000572756 RRAGCQ9HB90 399 aa20.66■□□□□ 0.9
NDE1-205ENST00000572756 CDHR2Q9BYE9 1310 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms