RNA–Protein interactions for RNA: ENST00000571459.5

LITAF-207, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-207ENST00000571459 KIF13BQ9NQT8 1826 aa13.06□□□□□ -0.32
LITAF-207ENST00000571459 C10orf71Q711Q0 1435 aa13.06□□□□□ -0.32
LITAF-207ENST00000571459 A0A0G2JLW4 131 aa13.06□□□□□ -0.32
LITAF-207ENST00000571459 CWF19L2Q2TBE0 894 aaKnown RBP13.06□□□□□ -0.32
LITAF-207ENST00000571459 RTL5Q5HYW3 569 aaPredicted RBP13.06□□□□□ -0.32
LITAF-207ENST00000571459 SYNE4Q8N205 404 aa13.06□□□□□ -0.32
LITAF-207ENST00000571459 CCDC191Q8NCU4 936 aa13.06□□□□□ -0.32
LITAF-207ENST00000571459 FRAT1Q92837 279 aaPredicted RBP13.06□□□□□ -0.32
LITAF-207ENST00000571459 CWC25Q9NXE8 425 aaPredicted RBP13.06□□□□□ -0.32
LITAF-207ENST00000571459 NEURL1BA8MQ27 555 aa13.05□□□□□ -0.32
LITAF-207ENST00000571459 DPEP1P16444 411 aa13.05□□□□□ -0.32
LITAF-207ENST00000571459 TGFB2P61812 414 aa13.05□□□□□ -0.32
LITAF-207ENST00000571459 LINS1Q8NG48 757 aa13.05□□□□□ -0.32
LITAF-207ENST00000571459 JARID2Q92833 1246 aaPredicted RBP13.05□□□□□ -0.32
LITAF-207ENST00000571459 FAM89AQ96GI7 184 aa13.05□□□□□ -0.32
LITAF-207ENST00000571459 SH3TC1Q8TE82 1336 aa13.05□□□□□ -0.32
LITAF-207ENST00000571459 N4BP2Q86UW6 1770 aaPredicted RBP13.04□□□□□ -0.32
LITAF-207ENST00000571459 ANKRD31Q8N7Z5 1873 aa13.04□□□□□ -0.32
LITAF-207ENST00000571459 IPO8O15397 1037 aaKnown RBP13.04□□□□□ -0.32
LITAF-207ENST00000571459 CHRNA5P30532 468 aa13.04□□□□□ -0.32
LITAF-207ENST00000571459 PDE6BP35913 854 aa13.04□□□□□ -0.32
LITAF-207ENST00000571459 BEND3Q5T5X7 828 aa13.04□□□□□ -0.32
LITAF-207ENST00000571459 C2CD5Q86YS7 1000 aa13.04□□□□□ -0.32
LITAF-207ENST00000571459 API5Q9BZZ5 524 aaKnown RBP13.04□□□□□ -0.32
LITAF-207ENST00000571459 RCAN3Q9UKA8 241 aa13.04□□□□□ -0.32
LITAF-207ENST00000571459 KIF16BQ96L93 1317 aa13.04□□□□□ -0.32
LITAF-207ENST00000571459 IBTKQ9P2D0 1353 aaPredicted RBP13.04□□□□□ -0.32
LITAF-207ENST00000571459 H0YIN7 160 aa13.03□□□□□ -0.32
LITAF-207ENST00000571459 HCLS1P14317 486 aaPredicted RBP13.03□□□□□ -0.32
LITAF-207ENST00000571459 GCKRQ14397 625 aa13.03□□□□□ -0.32
LITAF-207ENST00000571459 SLC10A5Q5PT55 438 aa13.03□□□□□ -0.32
LITAF-207ENST00000571459 ZBTB38Q8NAP3 1195 aaPredicted RBP13.03□□□□□ -0.32
LITAF-207ENST00000571459 ARHGAP45Q92619 1136 aa13.03□□□□□ -0.32
LITAF-207ENST00000571459 SRCIN1Q9C0H9 1055 aa13.03□□□□□ -0.32
LITAF-207ENST00000571459 WWC3Q9ULE0 1092 aa13.03□□□□□ -0.32
LITAF-207ENST00000571459 ABCC12Q96J65 1359 aa13.03□□□□□ -0.32
LITAF-207ENST00000571459 PCCAP05165 728 aaPredicted RBP13.02□□□□□ -0.33
LITAF-207ENST00000571459 KCNA3P22001 575 aa13.02□□□□□ -0.33
LITAF-207ENST00000571459 NLRP3Q96P20 1036 aa13.02□□□□□ -0.33
LITAF-207ENST00000571459 RNF123Q5XPI4 1314 aa13.02□□□□□ -0.33
LITAF-207ENST00000571459 PXDNLA1KZ92 1463 aa13.02□□□□□ -0.33
LITAF-207ENST00000571459 GOLGB1Q14789 3259 aaKnown RBP13.01□□□□□ -0.33
LITAF-207ENST00000571459 H7C1W4 665 aa13.01□□□□□ -0.33
LITAF-207ENST00000571459 IRS4O14654 1257 aaPredicted RBP13.01□□□□□ -0.33
LITAF-207ENST00000571459 ALDH1L1O75891 902 aa13.01□□□□□ -0.33
LITAF-207ENST00000571459 ZKSCAN2Q63HK3 967 aa13.01□□□□□ -0.33
LITAF-207ENST00000571459 ATF7IPQ6VMQ6 1270 aa13.01□□□□□ -0.33
LITAF-207ENST00000571459 C3orf67Q6ZVT6 689 aa13.01□□□□□ -0.33
LITAF-207ENST00000571459 UBE3BQ7Z3V4 1068 aa13.01□□□□□ -0.33
LITAF-207ENST00000571459 PELP1Q8IZL8 1130 aaKnown RBP13.01□□□□□ -0.33
LITAF-207ENST00000571459 ZNF622Q969S3 477 aaKnown RBP eCLIP13.01□□□□□ -0.33
LITAF-207ENST00000571459 PDZRN3Q9UPQ7 1066 aa13.01□□□□□ -0.33
LITAF-207ENST00000571459 KIAA1551Q9HCM1 1747 aa13□□□□□ -0.33
LITAF-207ENST00000571459 KLRG2A4D1S0 409 aaPredicted RBP13□□□□□ -0.33
LITAF-207ENST00000571459 SRGNP10124 158 aa13□□□□□ -0.33
LITAF-207ENST00000571459 TRIM27P14373 513 aa13□□□□□ -0.33
LITAF-207ENST00000571459 CLUAP1Q96AJ1 413 aa13□□□□□ -0.33
LITAF-207ENST00000571459 C9orf78Q9NZ63 289 aaPredicted RBP13□□□□□ -0.33
LITAF-207ENST00000571459 PIM2Q9P1W9 311 aa13□□□□□ -0.33
LITAF-207ENST00000571459 TNNQ9UQP3 1299 aa13□□□□□ -0.33
LITAF-207ENST00000571459 HSP90B1P14625 803 aaKnown RBP12.99□□□□□ -0.33
LITAF-207ENST00000571459 CCT4P50991 539 aaKnown RBP12.99□□□□□ -0.33
LITAF-207ENST00000571459 GPR162Q16538 588 aa12.99□□□□□ -0.33
LITAF-207ENST00000571459 RPGRQ92834 1020 aaKnown RBP12.99□□□□□ -0.33
LITAF-207ENST00000571459 MASTLQ96GX5 879 aa12.99□□□□□ -0.33
LITAF-207ENST00000571459 DDX60Q8IY21 1712 aaKnown RBP12.99□□□□□ -0.33
LITAF-207ENST00000571459 TNRC6CQ9HCJ0 1690 aaKnown RBP12.99□□□□□ -0.33
LITAF-207ENST00000571459 RIC1Q4ADV7 1423 aa12.98□□□□□ -0.33
LITAF-207ENST00000571459 CDHR2Q9BYE9 1310 aa12.98□□□□□ -0.33
LITAF-207ENST00000571459 GRM8O00222 908 aa12.98□□□□□ -0.33
LITAF-207ENST00000571459 NPR1P16066 1061 aa12.98□□□□□ -0.33
LITAF-207ENST00000571459 CASP7P55210 303 aa12.98□□□□□ -0.33
LITAF-207ENST00000571459 CRY2Q49AN0 593 aa12.98□□□□□ -0.33
LITAF-207ENST00000571459 DALRD3Q5D0E6 543 aaKnown RBP12.98□□□□□ -0.33
LITAF-207ENST00000571459 STYK1Q6J9G0 422 aa12.98□□□□□ -0.33
LITAF-207ENST00000571459 TTLL6Q8N841 843 aa12.98□□□□□ -0.33
LITAF-207ENST00000571459 BCS1LQ9Y276 419 aa12.98□□□□□ -0.33
LITAF-207ENST00000571459 LAMB2P55268 1798 aa12.98□□□□□ -0.33
LITAF-207ENST00000571459 COL11A2P13942 1736 aaPredicted RBP12.98□□□□□ -0.33
LITAF-207ENST00000571459 BRCA1P38398 1863 aaKnown RBP12.97□□□□□ -0.33
LITAF-207ENST00000571459 ABCC4O15439 1325 aa12.97□□□□□ -0.33
LITAF-207ENST00000571459 DCAF8L1A6NGE4 600 aa12.97□□□□□ -0.33
LITAF-207ENST00000571459 PLIN1O60240 522 aa12.97□□□□□ -0.33
LITAF-207ENST00000571459 PDE8AO60658 829 aa12.97□□□□□ -0.33
LITAF-207ENST00000571459 INTS3Q68E01 1043 aaKnown RBP12.97□□□□□ -0.33
LITAF-207ENST00000571459 CNKSR1Q969H4 720 aa12.97□□□□□ -0.33
LITAF-207ENST00000571459 RBM17Q96I25 401 aaKnown RBP12.97□□□□□ -0.33
LITAF-207ENST00000571459 DLEC1Q9Y238 1755 aa12.97□□□□□ -0.33
LITAF-207ENST00000571459 NBPF7P0C2Y1 421 aaPredicted RBP12.96□□□□□ -0.33
LITAF-207ENST00000571459 YBX3P16989 372 aaKnown RBP eCLIP12.96□□□□□ -0.33
LITAF-207ENST00000571459 HOXA10P31260 410 aaPredicted RBP12.96□□□□□ -0.33
LITAF-207ENST00000571459 SF3B3Q15393 1217 aaKnown RBP12.96□□□□□ -0.33
LITAF-207ENST00000571459 FTSJ3Q8IY81 847 aaKnown RBP12.96□□□□□ -0.33
LITAF-207ENST00000571459 DZIP1LQ8IYY4 767 aaKnown RBP12.96□□□□□ -0.33
LITAF-207ENST00000571459 CCDC85AQ96PX6 553 aaPredicted RBP12.96□□□□□ -0.33
LITAF-207ENST00000571459 USP44Q9H0E7 712 aa12.96□□□□□ -0.33
LITAF-207ENST00000571459 MYH3P11055 1940 aa12.96□□□□□ -0.34
LITAF-207ENST00000571459 TAF1P21675 1872 aa12.95□□□□□ -0.34
LITAF-207ENST00000571459 CACNA1SQ13698 1873 aa12.95□□□□□ -0.34
LITAF-207ENST00000571459 SLX4Q8IY92 1834 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms