RNA–Protein interactions for RNA: ENST00000570871.2

PCDHB19P-201, Transcript of protocadherin beta 19 pseudogene, humanhuman

BASIC

Gene PCDHB19P, Length 2,371 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB19P-201ENST00000570871 NBPF4Q96M43 638 aa20.15■□□□□ 0.82
PCDHB19P-201ENST00000570871 HMGN5P82970 282 aaKnown RBP20.14■□□□□ 0.82
PCDHB19P-201ENST00000570871 COL9A3Q14050 684 aaPredicted RBP20.14■□□□□ 0.82
PCDHB19P-201ENST00000570871 GPATCH3Q96I76 525 aa20.14■□□□□ 0.82
PCDHB19P-201ENST00000570871 TPCN1Q9ULQ1 816 aa20.14■□□□□ 0.82
PCDHB19P-201ENST00000570871 RBM8AQ9Y5S9 174 aaKnown RBP20.14■□□□□ 0.82
PCDHB19P-201ENST00000570871 EVI5LQ96CN4 794 aa20.14■□□□□ 0.81
PCDHB19P-201ENST00000570871 C9orf78Q9NZ63 289 aaPredicted RBP20.14■□□□□ 0.81
PCDHB19P-201ENST00000570871 RGPD2P0DJD1 1756 aa20.13■□□□□ 0.81
PCDHB19P-201ENST00000570871 ZKSCAN1P17029 563 aaPredicted RBP20.13■□□□□ 0.81
PCDHB19P-201ENST00000570871 CREB3L3Q68CJ9 461 aa20.13■□□□□ 0.81
PCDHB19P-201ENST00000570871 AACSQ86V21 672 aa20.13■□□□□ 0.81
PCDHB19P-201ENST00000570871 FAM227BQ96M60 508 aa20.13■□□□□ 0.81
PCDHB19P-201ENST00000570871 CHMP4AQ9BY43 222 aa20.13■□□□□ 0.81
PCDHB19P-201ENST00000570871 KCNF1Q9H3M0 494 aa20.13■□□□□ 0.81
PCDHB19P-201ENST00000570871 MAP3K2Q9Y2U5 619 aa20.13■□□□□ 0.81
PCDHB19P-201ENST00000570871 BTBD11A6QL63 1104 aa20.13■□□□□ 0.81
PCDHB19P-201ENST00000570871 GTF2F1P35269 517 aaKnown RBP eCLIP20.13■□□□□ 0.81
PCDHB19P-201ENST00000570871 LARP1BQ659C4 914 aaKnown RBP20.13■□□□□ 0.81
PCDHB19P-201ENST00000570871 TTC6Q86TZ1 520 aa20.13■□□□□ 0.81
PCDHB19P-201ENST00000570871 CCDC192P0DO97 292 aa20.12■□□□□ 0.81
PCDHB19P-201ENST00000570871 TEFQ10587 303 aa20.12■□□□□ 0.81
PCDHB19P-201ENST00000570871 LMOD2Q6P5Q4 547 aa20.12■□□□□ 0.81
PCDHB19P-201ENST00000570871 KCNJ4P48050 445 aa20.12■□□□□ 0.81
PCDHB19P-201ENST00000570871 FERMT3Q86UX7 667 aa20.12■□□□□ 0.81
PCDHB19P-201ENST00000570871 ERC1Q8IUD2 1116 aa20.12■□□□□ 0.81
PCDHB19P-201ENST00000570871 ZNF710Q8N1W2 664 aa20.12■□□□□ 0.81
PCDHB19P-201ENST00000570871 IP6K1Q92551 441 aa20.12■□□□□ 0.81
PCDHB19P-201ENST00000570871 DBF4Q9UBU7 674 aaPredicted RBP20.12■□□□□ 0.81
PCDHB19P-201ENST00000570871 NMIQ13287 307 aaPredicted RBP20.11■□□□□ 0.81
PCDHB19P-201ENST00000570871 PROSER3Q2NL68 480 aa20.11■□□□□ 0.81
PCDHB19P-201ENST00000570871 CWF19L2Q2TBE0 894 aaKnown RBP20.11■□□□□ 0.81
PCDHB19P-201ENST00000570871 CDC37L1Q7L3B6 337 aa20.11■□□□□ 0.81
PCDHB19P-201ENST00000570871 SPC24Q8NBT2 197 aa20.11■□□□□ 0.81
PCDHB19P-201ENST00000570871 KIAA1524Q8TCG1 905 aa20.11■□□□□ 0.81
PCDHB19P-201ENST00000570871 MAP4K1Q92918 833 aa20.11■□□□□ 0.81
PCDHB19P-201ENST00000570871 PYCARDQ9ULZ3 195 aa20.11■□□□□ 0.81
PCDHB19P-201ENST00000570871 CHMP3Q9Y3E7 222 aa20.11■□□□□ 0.81
PCDHB19P-201ENST00000570871 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.11■□□□□ 0.81
PCDHB19P-201ENST00000570871 LMO7Q8WWI1 1683 aa20.11■□□□□ 0.81
PCDHB19P-201ENST00000570871 ALDH1L1O75891 902 aa20.1■□□□□ 0.81
PCDHB19P-201ENST00000570871 FAM173BQ6P4H8 233 aa20.1■□□□□ 0.81
PCDHB19P-201ENST00000570871 MPRIPQ6WCQ1 1025 aa20.1■□□□□ 0.81
PCDHB19P-201ENST00000570871 KRT28Q7Z3Y7 464 aa20.1■□□□□ 0.81
PCDHB19P-201ENST00000570871 KRT85P78386 507 aa20.1■□□□□ 0.81
PCDHB19P-201ENST00000570871 SLC27A2O14975 620 aa20.09■□□□□ 0.81
PCDHB19P-201ENST00000570871 LIG1P18858 919 aa20.09■□□□□ 0.81
PCDHB19P-201ENST00000570871 ZNF530Q6P9A1 599 aaPredicted RBP20.09■□□□□ 0.81
PCDHB19P-201ENST00000570871 CADPS2Q86UW7 1296 aa20.09■□□□□ 0.81
PCDHB19P-201ENST00000570871 CCDC94Q9BW85 323 aaPredicted RBP20.09■□□□□ 0.81
PCDHB19P-201ENST00000570871 SASH1O94885 1247 aa20.08■□□□□ 0.81
PCDHB19P-201ENST00000570871 CAMK4Q16566 473 aa20.08■□□□□ 0.81
PCDHB19P-201ENST00000570871 KSR2Q6VAB6 950 aa20.08■□□□□ 0.81
PCDHB19P-201ENST00000570871 EAF2Q96CJ1 260 aaPredicted RBP20.08■□□□□ 0.81
PCDHB19P-201ENST00000570871 TCEANC2Q96MN5 208 aa20.08■□□□□ 0.81
PCDHB19P-201ENST00000570871 FAM177BA6PVY3 158 aa20.08■□□□□ 0.8
PCDHB19P-201ENST00000570871 MAP3K11Q16584 847 aa20.08■□□□□ 0.8
PCDHB19P-201ENST00000570871 AKAP4Q5JQC9 854 aa20.08■□□□□ 0.8
PCDHB19P-201ENST00000570871 FAM200AQ8TCP9 573 aa20.08■□□□□ 0.8
PCDHB19P-201ENST00000570871 CCDC8Q9H0W5 538 aaPredicted RBP20.08■□□□□ 0.8
PCDHB19P-201ENST00000570871 NUP62CLQ9H1M0 184 aa20.08■□□□□ 0.8
PCDHB19P-201ENST00000570871 TRPM3Q9HCF6 1732 aaPredicted RBP20.07■□□□□ 0.8
PCDHB19P-201ENST00000570871 PSMA5P28066 241 aa20.07■□□□□ 0.8
PCDHB19P-201ENST00000570871 KIF3AQ9Y496 699 aa20.07■□□□□ 0.8
PCDHB19P-201ENST00000570871 MRVI1Q9Y6F6 885 aa20.07■□□□□ 0.8
PCDHB19P-201ENST00000570871 ELP1O95163 1332 aa20.07■□□□□ 0.8
PCDHB19P-201ENST00000570871 A0A0D9SFI3 127 aa20.07■□□□□ 0.8
PCDHB19P-201ENST00000570871 TPM3P06753 285 aa20.07■□□□□ 0.8
PCDHB19P-201ENST00000570871 LRRC59Q96AG4 307 aaKnown RBP20.07■□□□□ 0.8
PCDHB19P-201ENST00000570871 SUCLG2Q96I99 432 aa20.07■□□□□ 0.8
PCDHB19P-201ENST00000570871 TLR7Q9NYK1 1049 aaKnown RBP20.07■□□□□ 0.8
PCDHB19P-201ENST00000570871 TAF6LQ9Y6J9 622 aa20.07■□□□□ 0.8
PCDHB19P-201ENST00000570871 HIP1O00291 1037 aa20.06■□□□□ 0.8
PCDHB19P-201ENST00000570871 TYRO3Q06418 890 aa20.06■□□□□ 0.8
PCDHB19P-201ENST00000570871 KAZALD1Q96I82 304 aa20.06■□□□□ 0.8
PCDHB19P-201ENST00000570871 DCCP43146 1447 aa20.06■□□□□ 0.8
PCDHB19P-201ENST00000570871 NFAT5O94916 1531 aa20.06■□□□□ 0.8
PCDHB19P-201ENST00000570871 PRAMEF22A3QJZ6 481 aa20.06■□□□□ 0.8
PCDHB19P-201ENST00000570871 PDCP20941 246 aa20.06■□□□□ 0.8
PCDHB19P-201ENST00000570871 SNRKQ9NRH2 765 aa20.06■□□□□ 0.8
PCDHB19P-201ENST00000570871 GIGYF1O75420 1035 aaPredicted RBP20.05■□□□□ 0.8
PCDHB19P-201ENST00000570871 BLOC1S2Q6QNY1 142 aa20.05■□□□□ 0.8
PCDHB19P-201ENST00000570871 BICC1Q9H694 974 aaKnown RBP20.05■□□□□ 0.8
PCDHB19P-201ENST00000570871 GOLGA6L6A8MZA4 724 aa20.05■□□□□ 0.8
PCDHB19P-201ENST00000570871 G3BP1Q13283 466 aaKnown RBP eCLIP20.05■□□□□ 0.8
PCDHB19P-201ENST00000570871 LUZP1Q86V48 1076 aa20.05■□□□□ 0.8
PCDHB19P-201ENST00000570871 CKAP2LQ8IYA6 745 aa20.05■□□□□ 0.8
PCDHB19P-201ENST00000570871 BOLA2Q9H3K6 86 aa20.05■□□□□ 0.8
PCDHB19P-201ENST00000570871 HDAC5Q9UQL6 1122 aa20.05■□□□□ 0.8
PCDHB19P-201ENST00000570871 GRM8O00222 908 aa20.04■□□□□ 0.8
PCDHB19P-201ENST00000570871 RNMTO43148 476 aaKnown RBP20.04■□□□□ 0.8
PCDHB19P-201ENST00000570871 PDIA4P13667 645 aaKnown RBP20.04■□□□□ 0.8
PCDHB19P-201ENST00000570871 LARP1Q6PKG0 1096 aaKnown RBP20.04■□□□□ 0.8
PCDHB19P-201ENST00000570871 BRINP3Q76B58 766 aa20.04■□□□□ 0.8
PCDHB19P-201ENST00000570871 SMAP1Q8IYB5 467 aaPredicted RBP20.04■□□□□ 0.8
PCDHB19P-201ENST00000570871 FSD1Q9BTV5 496 aa20.04■□□□□ 0.8
PCDHB19P-201ENST00000570871 DACT1Q9NYF0 836 aa20.04■□□□□ 0.8
PCDHB19P-201ENST00000570871 TFIP11Q9UBB9 837 aaKnown RBP20.04■□□□□ 0.8
PCDHB19P-201ENST00000570871 PRDM4Q9UKN5 801 aa20.04■□□□□ 0.8
PCDHB19P-201ENST00000570871 KIF1AQ12756 1690 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms