RNA–Protein interactions for RNA: ENST00000570798.5

LITAF-204, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-204ENST00000570798 NPR1P16066 1061 aa23.28■■□□□ 1.32
LITAF-204ENST00000570798 NLRP10Q86W26 655 aa23.28■■□□□ 1.32
LITAF-204ENST00000570798 LAMB2P55268 1798 aa23.27■■□□□ 1.32
LITAF-204ENST00000570798 CRY2Q49AN0 593 aa23.27■■□□□ 1.32
LITAF-204ENST00000570798 UTP14AQ9BVJ6 771 aaKnown RBP23.27■■□□□ 1.32
LITAF-204ENST00000570798 SLC10A5Q5PT55 438 aa23.26■■□□□ 1.31
LITAF-204ENST00000570798 ISCA1Q9BUE6 129 aa23.26■■□□□ 1.31
LITAF-204ENST00000570798 RNF123Q5XPI4 1314 aa23.26■■□□□ 1.31
LITAF-204ENST00000570798 GOLGA2Q08379 1002 aa23.25■■□□□ 1.31
LITAF-204ENST00000570798 VAMP4O75379 141 aa23.24■■□□□ 1.31
LITAF-204ENST00000570798 EXOSC9Q06265 439 aaKnown RBP23.24■■□□□ 1.31
LITAF-204ENST00000570798 DIEXFQ68CQ4 756 aaKnown RBP23.24■■□□□ 1.31
LITAF-204ENST00000570798 PRPF40BQ6NWY9 871 aaKnown RBP23.24■■□□□ 1.31
LITAF-204ENST00000570798 C7orf43Q8WVR3 580 aa23.24■■□□□ 1.31
LITAF-204ENST00000570798 C21orf2O43822 256 aa23.23■■□□□ 1.31
LITAF-204ENST00000570798 TRIM28Q13263 835 aaKnown RBP23.23■■□□□ 1.31
LITAF-204ENST00000570798 MYH16Q9H6N6 1097 aa23.23■■□□□ 1.31
LITAF-204ENST00000570798 DDX60Q8IY21 1712 aaKnown RBP23.22■■□□□ 1.31
LITAF-204ENST00000570798 DICER1Q9UPY3 1922 aaKnown RBP23.22■■□□□ 1.31
LITAF-204ENST00000570798 NFKBIEO00221 500 aa23.22■■□□□ 1.31
LITAF-204ENST00000570798 HOXA10P31260 410 aaPredicted RBP23.22■■□□□ 1.31
LITAF-204ENST00000570798 C9orf131Q5VYM1 1079 aa23.22■■□□□ 1.31
LITAF-204ENST00000570798 RIC3Q7Z5B4 369 aa23.22■■□□□ 1.31
LITAF-204ENST00000570798 STK31Q9BXU1 1019 aa23.22■■□□□ 1.31
LITAF-204ENST00000570798 ATP5J2-PTCD1G3V325 749 aa23.21■■□□□ 1.31
LITAF-204ENST00000570798 TCERG1O14776 1098 aaKnown RBP23.21■■□□□ 1.31
LITAF-204ENST00000570798 ALDH1B1P30837 517 aa23.21■■□□□ 1.31
LITAF-204ENST00000570798 RASSF7Q02833 373 aa23.21■■□□□ 1.31
LITAF-204ENST00000570798 C3orf67Q6ZVT6 689 aa23.21■■□□□ 1.31
LITAF-204ENST00000570798 ZNF219Q9P2Y4 722 aaPredicted RBP23.21■■□□□ 1.31
LITAF-204ENST00000570798 TRMT112Q9UI30 125 aaKnown RBP23.21■■□□□ 1.31
LITAF-204ENST00000570798 SH3TC1Q8TE82 1336 aa23.2■■□□□ 1.3
LITAF-204ENST00000570798 PRELPP51888 382 aa23.2■■□□□ 1.3
LITAF-204ENST00000570798 SYNE4Q8N205 404 aa23.2■■□□□ 1.3
LITAF-204ENST00000570798 NLRP3Q96P20 1036 aa23.2■■□□□ 1.3
LITAF-204ENST00000570798 DDX58O95786 925 aaKnown RBP23.19■■□□□ 1.3
LITAF-204ENST00000570798 SLC4A2P04920 1241 aa23.19■■□□□ 1.3
LITAF-204ENST00000570798 G2E3Q7L622 706 aa23.19■■□□□ 1.3
LITAF-204ENST00000570798 MIER1Q8N108 512 aa23.19■■□□□ 1.3
LITAF-204ENST00000570798 LTBP3Q9NS15 1303 aa23.18■■□□□ 1.3
LITAF-204ENST00000570798 SOGA3Q5TF21 947 aa23.18■■□□□ 1.3
LITAF-204ENST00000570798 KSR2Q6VAB6 950 aa23.18■■□□□ 1.3
LITAF-204ENST00000570798 METTL22Q9BUU2 404 aaPredicted RBP23.18■■□□□ 1.3
LITAF-204ENST00000570798 RNF181Q9P0P0 153 aa23.18■■□□□ 1.3
LITAF-204ENST00000570798 RPGRQ92834 1020 aaKnown RBP23.17■■□□□ 1.3
LITAF-204ENST00000570798 CRAMP1Q96RY5 1269 aa23.17■■□□□ 1.3
LITAF-204ENST00000570798 MYD88Q99836 296 aa23.17■■□□□ 1.3
LITAF-204ENST00000570798 HCLS1P14317 486 aaPredicted RBP23.16■■□□□ 1.3
LITAF-204ENST00000570798 LMNB1P20700 586 aa23.16■■□□□ 1.3
LITAF-204ENST00000570798 MAP3K2Q9Y2U5 619 aa23.16■■□□□ 1.3
LITAF-204ENST00000570798 TIAM2Q8IVF5 1701 aa23.16■■□□□ 1.3
LITAF-204ENST00000570798 PI4KAP2A4QPH2 592 aa23.15■■□□□ 1.3
LITAF-204ENST00000570798 PI4KAP1Q8N8J0 262 aa23.15■■□□□ 1.3
LITAF-204ENST00000570798 ZNF428Q96B54 188 aa23.15■■□□□ 1.3
LITAF-204ENST00000570798 FAM89AQ96GI7 184 aa23.15■■□□□ 1.3
LITAF-204ENST00000570798 RBM17Q96I25 401 aaKnown RBP23.15■■□□□ 1.3
LITAF-204ENST00000570798 TAF1P21675 1872 aa23.15■■□□□ 1.3
LITAF-204ENST00000570798 SNED1Q8TER0 1413 aa23.15■■□□□ 1.3
LITAF-204ENST00000570798 CCDC93Q567U6 631 aa23.14■■□□□ 1.29
LITAF-204ENST00000570798 CCDC191Q8NCU4 936 aa23.14■■□□□ 1.29
LITAF-204ENST00000570798 E9PSI1 815 aa23.13■■□□□ 1.29
LITAF-204ENST00000570798 SLFN5Q08AF3 891 aa23.13■■□□□ 1.29
LITAF-204ENST00000570798 FLIIQ13045 1269 aa23.13■■□□□ 1.29
LITAF-204ENST00000570798 OLFM4Q6UX06 510 aa23.13■■□□□ 1.29
LITAF-204ENST00000570798 TAOK3Q9H2K8 898 aa23.13■■□□□ 1.29
LITAF-204ENST00000570798 GPBP1L1Q9HC44 474 aaPredicted RBP23.13■■□□□ 1.29
LITAF-204ENST00000570798 ZC3H4Q9UPT8 1303 aaKnown RBP23.12■■□□□ 1.29
LITAF-204ENST00000570798 ZBTB38Q8NAP3 1195 aaPredicted RBP23.12■■□□□ 1.29
LITAF-204ENST00000570798 ZNF526Q8TF50 670 aaPredicted RBP23.12■■□□□ 1.29
LITAF-204ENST00000570798 IGKV5-2P06315 115 aa23.11■■□□□ 1.29
LITAF-204ENST00000570798 ABCC4O15439 1325 aa23.1■■□□□ 1.29
LITAF-204ENST00000570798 PCCAP05165 728 aaPredicted RBP23.1■■□□□ 1.29
LITAF-204ENST00000570798 SF3B3Q15393 1217 aaKnown RBP23.1■■□□□ 1.29
LITAF-204ENST00000570798 CC2D2BQ6DHV5 1058 aa23.1■■□□□ 1.29
LITAF-204ENST00000570798 TRMT2AQ8IZ69 625 aaKnown RBP23.1■■□□□ 1.29
LITAF-204ENST00000570798 RTKN2Q8IZC4 609 aa23.1■■□□□ 1.29
LITAF-204ENST00000570798 CWC25Q9NXE8 425 aaPredicted RBP23.1■■□□□ 1.29
LITAF-204ENST00000570798 IRS4O14654 1257 aaPredicted RBP23.09■■□□□ 1.29
LITAF-204ENST00000570798 FKBP4Q02790 459 aaKnown RBP eCLIP23.09■■□□□ 1.29
LITAF-204ENST00000570798 RTL5Q5HYW3 569 aaPredicted RBP23.09■■□□□ 1.29
LITAF-204ENST00000570798 CDCA7LQ96GN5 454 aa23.09■■□□□ 1.29
LITAF-204ENST00000570798 PPEF1O14829 653 aaPredicted RBP23.08■■□□□ 1.29
LITAF-204ENST00000570798 FKBP5Q13451 457 aaPredicted RBP23.08■■□□□ 1.29
LITAF-204ENST00000570798 MYH3P11055 1940 aa23.08■■□□□ 1.28
LITAF-204ENST00000570798 NEXNQ0ZGT2 675 aa23.07■■□□□ 1.28
LITAF-204ENST00000570798 NEURL1BA8MQ27 555 aa23.06■■□□□ 1.28
LITAF-204ENST00000570798 BBOX1O75936 387 aa23.06■■□□□ 1.28
LITAF-204ENST00000570798 CWF19L2Q2TBE0 894 aaKnown RBP23.06■■□□□ 1.28
LITAF-204ENST00000570798 GRIPAP1Q4V328 841 aa23.06■■□□□ 1.28
LITAF-204ENST00000570798 DDX46Q7L014 1031 aaKnown RBP23.06■■□□□ 1.28
LITAF-204ENST00000570798 SLC51AQ86UW1 340 aa23.06■■□□□ 1.28
LITAF-204ENST00000570798 DNAAF4Q8WXU2 420 aa23.06■■□□□ 1.28
LITAF-204ENST00000570798 PSMD1Q99460 953 aa23.06■■□□□ 1.28
LITAF-204ENST00000570798 ATP6V0A2Q9Y487 856 aa23.06■■□□□ 1.28
LITAF-204ENST00000570798 LRRC37AA6NMS7 1700 aa23.05■■□□□ 1.28
LITAF-204ENST00000570798 KIF3CO14782 793 aa23.05■■□□□ 1.28
LITAF-204ENST00000570798 GRAPQ13588 217 aa23.05■■□□□ 1.28
LITAF-204ENST00000570798 GRAPLQ8TC17 118 aaPredicted RBP23.05■■□□□ 1.28
LITAF-204ENST00000570798 CDHR2Q9BYE9 1310 aa23.05■■□□□ 1.28
LITAF-204ENST00000570798 COL4A1P02462 1669 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms