RNA–Protein interactions for RNA: ENST00000569817.5

SNUPN-211, Transcript of snurportin 1, humanhuman

TSL 3

Gene SNUPN, Length 1,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-211ENST00000569817 ABCC12Q96J65 1359 aa20.19■□□□□ 0.82
SNUPN-211ENST00000569817 HOXA10P31260 410 aaPredicted RBP20.18■□□□□ 0.82
SNUPN-211ENST00000569817 RNF123Q5XPI4 1314 aa20.18■□□□□ 0.82
SNUPN-211ENST00000569817 LTBP3Q9NS15 1303 aa20.18■□□□□ 0.82
SNUPN-211ENST00000569817 SENP3-EIF4A1A0A087X0R7 540 aa20.17■□□□□ 0.82
SNUPN-211ENST00000569817 KIF3CO14782 793 aa20.17■□□□□ 0.82
SNUPN-211ENST00000569817 NLRP10Q86W26 655 aa20.17■□□□□ 0.82
SNUPN-211ENST00000569817 WDR63Q8IWG1 891 aa20.17■□□□□ 0.82
SNUPN-211ENST00000569817 CCDC30Q5VVM6 783 aa20.16■□□□□ 0.82
SNUPN-211ENST00000569817 TSPYL6Q8N831 410 aa20.16■□□□□ 0.82
SNUPN-211ENST00000569817 NLRP3Q96P20 1036 aa20.16■□□□□ 0.82
SNUPN-211ENST00000569817 ARFGEF2Q9Y6D5 1785 aa20.16■□□□□ 0.82
SNUPN-211ENST00000569817 FER1L6Q2WGJ9 1857 aa20.16■□□□□ 0.82
SNUPN-211ENST00000569817 FAM9BQ8IZU0 186 aa20.15■□□□□ 0.82
SNUPN-211ENST00000569817 TSR2Q969E8 191 aaKnown RBP20.15■□□□□ 0.82
SNUPN-211ENST00000569817 ISCA1Q9BUE6 129 aa20.15■□□□□ 0.82
SNUPN-211ENST00000569817 TAOK3Q9H2K8 898 aa20.15■□□□□ 0.82
SNUPN-211ENST00000569817 KDM2BQ8NHM5 1336 aa20.14■□□□□ 0.81
SNUPN-211ENST00000569817 TRIM28Q13263 835 aaKnown RBP20.14■□□□□ 0.81
SNUPN-211ENST00000569817 CCDC93Q567U6 631 aa20.14■□□□□ 0.81
SNUPN-211ENST00000569817 RTKN2Q8IZC4 609 aa20.14■□□□□ 0.81
SNUPN-211ENST00000569817 RPGRQ92834 1020 aaKnown RBP20.14■□□□□ 0.81
SNUPN-211ENST00000569817 CRAMP1Q96RY5 1269 aa20.14■□□□□ 0.81
SNUPN-211ENST00000569817 TRMT112Q9UI30 125 aaKnown RBP20.14■□□□□ 0.81
SNUPN-211ENST00000569817 CCDC88AQ3V6T2 1871 aa20.13■□□□□ 0.81
SNUPN-211ENST00000569817 RBM17Q96I25 401 aaKnown RBP20.13■□□□□ 0.81
SNUPN-211ENST00000569817 PHAXQ9H814 394 aaKnown RBP20.13■□□□□ 0.81
SNUPN-211ENST00000569817 GLTPD2A6NH11 291 aa20.12■□□□□ 0.81
SNUPN-211ENST00000569817 CC2D2BQ6DHV5 1058 aa20.12■□□□□ 0.81
SNUPN-211ENST00000569817 C3orf67Q6ZVT6 689 aa20.12■□□□□ 0.81
SNUPN-211ENST00000569817 NMRK2Q9NPI5 230 aa20.12■□□□□ 0.81
SNUPN-211ENST00000569817 SALL2Q9Y467 1007 aaPredicted RBP20.12■□□□□ 0.81
SNUPN-211ENST00000569817 ANKRD36CQ5JPF3 1778 aa20.12■□□□□ 0.81
SNUPN-211ENST00000569817 TNRC6CQ9HCJ0 1690 aaKnown RBP20.12■□□□□ 0.81
SNUPN-211ENST00000569817 CACNA1SQ13698 1873 aa20.11■□□□□ 0.81
SNUPN-211ENST00000569817 SH3TC1Q8TE82 1336 aa20.11■□□□□ 0.81
SNUPN-211ENST00000569817 GOLGA2Q08379 1002 aa20.11■□□□□ 0.81
SNUPN-211ENST00000569817 TWISTNBQ3B726 338 aaPredicted RBP20.11■□□□□ 0.81
SNUPN-211ENST00000569817 RIC3Q7Z5B4 369 aa20.11■□□□□ 0.81
SNUPN-211ENST00000569817 FKBP4Q02790 459 aaKnown RBP eCLIP20.1■□□□□ 0.81
SNUPN-211ENST00000569817 GRIPAP1Q4V328 841 aa20.1■□□□□ 0.81
SNUPN-211ENST00000569817 SYNE4Q8N205 404 aa20.1■□□□□ 0.81
SNUPN-211ENST00000569817 ATP5J2-PTCD1G3V325 749 aa20.09■□□□□ 0.81
SNUPN-211ENST00000569817 TOMM70O94826 608 aa20.09■□□□□ 0.81
SNUPN-211ENST00000569817 HCLS1P14317 486 aaPredicted RBP20.09■□□□□ 0.81
SNUPN-211ENST00000569817 OLFM4Q6UX06 510 aa20.09■□□□□ 0.81
SNUPN-211ENST00000569817 DICER1Q9UPY3 1922 aaKnown RBP20.09■□□□□ 0.81
SNUPN-211ENST00000569817 DDX58O95786 925 aaKnown RBP20.08■□□□□ 0.81
SNUPN-211ENST00000569817 DPY19L2Q6NUT2 758 aa20.08■□□□□ 0.81
SNUPN-211ENST00000569817 STK31Q9BXU1 1019 aa20.08■□□□□ 0.81
SNUPN-211ENST00000569817 RRAGCQ9HB90 399 aa20.08■□□□□ 0.81
SNUPN-211ENST00000569817 FANCIQ9NVI1 1328 aa20.07■□□□□ 0.8
SNUPN-211ENST00000569817 FAM89AQ96GI7 184 aa20.07■□□□□ 0.8
SNUPN-211ENST00000569817 PSMD1Q99460 953 aa20.07■□□□□ 0.8
SNUPN-211ENST00000569817 BBOX1O75936 387 aa20.06■□□□□ 0.8
SNUPN-211ENST00000569817 METTL22Q9BUU2 404 aaPredicted RBP20.06■□□□□ 0.8
SNUPN-211ENST00000569817 SNED1Q8TER0 1413 aa20.05■□□□□ 0.8
SNUPN-211ENST00000569817 PPEF1O14829 653 aaPredicted RBP20.05■□□□□ 0.8
SNUPN-211ENST00000569817 VAMP4O75379 141 aa20.05■□□□□ 0.8
SNUPN-211ENST00000569817 SLC4A2P04920 1241 aa20.05■□□□□ 0.8
SNUPN-211ENST00000569817 KSR2Q6VAB6 950 aa20.05■□□□□ 0.8
SNUPN-211ENST00000569817 CCDC191Q8NCU4 936 aa20.05■□□□□ 0.8
SNUPN-211ENST00000569817 ABCC4O15439 1325 aa20.04■□□□□ 0.8
SNUPN-211ENST00000569817 VEGFAP15692 232 aaPredicted RBP20.04■□□□□ 0.8
SNUPN-211ENST00000569817 SF3B3Q15393 1217 aaKnown RBP20.04■□□□□ 0.8
SNUPN-211ENST00000569817 DDX46Q7L014 1031 aaKnown RBP20.04■□□□□ 0.8
SNUPN-211ENST00000569817 ZBTB38Q8NAP3 1195 aaPredicted RBP20.04■□□□□ 0.8
SNUPN-211ENST00000569817 RBM46Q8TBY0 533 aaKnown RBP20.04■□□□□ 0.8
SNUPN-211ENST00000569817 MYD88Q99836 296 aa20.04■□□□□ 0.8
SNUPN-211ENST00000569817 SPINK5Q9NQ38 1064 aaPredicted RBP20.04■□□□□ 0.8
SNUPN-211ENST00000569817 ZNF277Q9NRM2 450 aaPredicted RBP20.04■□□□□ 0.8
SNUPN-211ENST00000569817 ATP6V0A2Q9Y487 856 aa20.04■□□□□ 0.8
SNUPN-211ENST00000569817 PI4KAP2A4QPH2 592 aa20.03■□□□□ 0.8
SNUPN-211ENST00000569817 TCERG1O14776 1098 aaKnown RBP20.03■□□□□ 0.8
SNUPN-211ENST00000569817 IARSP41252 1262 aaKnown RBP20.03■□□□□ 0.8
SNUPN-211ENST00000569817 EXOSC9Q06265 439 aaKnown RBP20.03■□□□□ 0.8
SNUPN-211ENST00000569817 C16orf71Q8IYS4 520 aaPredicted RBP20.03■□□□□ 0.8
SNUPN-211ENST00000569817 PI4KAP1Q8N8J0 262 aa20.03■□□□□ 0.8
SNUPN-211ENST00000569817 ZNF428Q96B54 188 aa20.03■□□□□ 0.8
SNUPN-211ENST00000569817 TMX4Q9H1E5 349 aaPredicted RBP20.03■□□□□ 0.8
SNUPN-211ENST00000569817 MYH16Q9H6N6 1097 aa20.03■□□□□ 0.8
SNUPN-211ENST00000569817 MAP3K2Q9Y2U5 619 aa20.03■□□□□ 0.8
SNUPN-211ENST00000569817 IRS4O14654 1257 aaPredicted RBP20.02■□□□□ 0.8
SNUPN-211ENST00000569817 HSP90B1P14625 803 aaKnown RBP20.02■□□□□ 0.8
SNUPN-211ENST00000569817 SP8Q8IXZ3 490 aa20.02■□□□□ 0.8
SNUPN-211ENST00000569817 TIAM2Q8IVF5 1701 aa20.02■□□□□ 0.79
SNUPN-211ENST00000569817 ZNF521Q96K83 1311 aa20.02■□□□□ 0.79
SNUPN-211ENST00000569817 POTECB2RU33 542 aa20.01■□□□□ 0.79
SNUPN-211ENST00000569817 CCER2I3L3R5 266 aa20.01■□□□□ 0.79
SNUPN-211ENST00000569817 PCCAP05165 728 aaPredicted RBP20.01■□□□□ 0.79
SNUPN-211ENST00000569817 HSPA6P17066 643 aa20.01■□□□□ 0.79
SNUPN-211ENST00000569817 GRAPQ13588 217 aa20.01■□□□□ 0.79
SNUPN-211ENST00000569817 G2E3Q7L622 706 aa20.01■□□□□ 0.79
SNUPN-211ENST00000569817 GRAPLQ8TC17 118 aaPredicted RBP20.01■□□□□ 0.79
SNUPN-211ENST00000569817 CWC25Q9NXE8 425 aaPredicted RBP20.01■□□□□ 0.79
SNUPN-211ENST00000569817 RTL5Q5HYW3 569 aaPredicted RBP20■□□□□ 0.79
SNUPN-211ENST00000569817 TMC4Q7Z404 712 aa20■□□□□ 0.79
SNUPN-211ENST00000569817 VPS33BQ9H267 617 aa20■□□□□ 0.79
SNUPN-211ENST00000569817 CACNA1FO60840 1977 aa20■□□□□ 0.79
SNUPN-211ENST00000569817 LAMB2P55268 1798 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms