RNA–Protein interactions for RNA: ENST00000568459.5

PKM-220, Transcript of pyruvate kinase M1/2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKM, Length 1,806 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-220ENST00000568459 ELL2O00472 640 aaPredicted RBP17.58■□□□□ 0.41
PKM-220ENST00000568459 GNPATO15228 680 aa17.58■□□□□ 0.41
PKM-220ENST00000568459 ZNF500O60304 480 aaPredicted RBP17.58■□□□□ 0.41
PKM-220ENST00000568459 PTCD1O75127 700 aaKnown RBP17.58■□□□□ 0.41
PKM-220ENST00000568459 MSNP26038 577 aaKnown RBP17.58■□□□□ 0.41
PKM-220ENST00000568459 FOXD4L1Q9NU39 408 aa17.58■□□□□ 0.41
PKM-220ENST00000568459 MSL1Q68DK7 614 aa17.58■□□□□ 0.4
PKM-220ENST00000568459 MCTP1Q6DN14 999 aa17.58■□□□□ 0.4
PKM-220ENST00000568459 SLC4A9Q96Q91 983 aa17.58■□□□□ 0.4
PKM-220ENST00000568459 NOL7Q9UMY1 257 aaKnown RBP17.58■□□□□ 0.4
PKM-220ENST00000568459 MBD3O95983 291 aa17.57■□□□□ 0.4
PKM-220ENST00000568459 ANAPC15P60006 121 aa17.57■□□□□ 0.4
PKM-220ENST00000568459 RC3H1Q5TC82 1133 aaKnown RBP17.56■□□□□ 0.4
PKM-220ENST00000568459 SMIM5Q71RC9 77 aa17.56■□□□□ 0.4
PKM-220ENST00000568459 AMIGO3Q86WK7 504 aa17.56■□□□□ 0.4
PKM-220ENST00000568459 INTS4Q96HW7 963 aaKnown RBP17.56■□□□□ 0.4
PKM-220ENST00000568459 MAP3K5Q99683 1374 aa17.56■□□□□ 0.4
PKM-220ENST00000568459 RTCBQ9Y3I0 505 aaKnown RBP17.56■□□□□ 0.4
PKM-220ENST00000568459 GNAT3A8MTJ3 354 aa17.55■□□□□ 0.4
PKM-220ENST00000568459 CCT4P50991 539 aaKnown RBP17.55■□□□□ 0.4
PKM-220ENST00000568459 SOS1Q07889 1333 aaPredicted RBP17.55■□□□□ 0.4
PKM-220ENST00000568459 CUL4AQ13619 759 aa17.54■□□□□ 0.4
PKM-220ENST00000568459 TRAPPC3LQ5T215 181 aa17.54■□□□□ 0.4
PKM-220ENST00000568459 LRSAM1Q6UWE0 723 aa17.54■□□□□ 0.4
PKM-220ENST00000568459 PDCL3Q9H2J4 239 aa17.54■□□□□ 0.4
PKM-220ENST00000568459 COL5A3P25940 1745 aaPredicted RBP17.54■□□□□ 0.4
PKM-220ENST00000568459 CAVIN1Q6NZI2 390 aaKnown RBP17.54■□□□□ 0.4
PKM-220ENST00000568459 MYH14Q7Z406 1995 aaKnown RBP17.54■□□□□ 0.4
PKM-220ENST00000568459 CNTNAP4Q9C0A0 1308 aa17.53■□□□□ 0.4
PKM-220ENST00000568459 C16orf71Q8IYS4 520 aaPredicted RBP17.53■□□□□ 0.4
PKM-220ENST00000568459 ZDHHC9Q9Y397 364 aa17.53■□□□□ 0.4
PKM-220ENST00000568459 ADAMTS7Q9UKP4 1686 aa17.53■□□□□ 0.4
PKM-220ENST00000568459 SALL3Q9BXA9 1300 aa17.53■□□□□ 0.4
PKM-220ENST00000568459 RPS6KA4O75676 772 aa17.52■□□□□ 0.4
PKM-220ENST00000568459 PDE1AP54750 535 aa17.52■□□□□ 0.4
PKM-220ENST00000568459 TEFQ10587 303 aa17.52■□□□□ 0.4
PKM-220ENST00000568459 CSPP1Q1MSJ5 1256 aa17.52■□□□□ 0.4
PKM-220ENST00000568459 MRC1P22897 1456 aa17.52■□□□□ 0.4
PKM-220ENST00000568459 ADRA2BP18089 450 aa17.51■□□□□ 0.39
PKM-220ENST00000568459 MCCP23508 829 aa17.51■□□□□ 0.39
PKM-220ENST00000568459 SLC39A6Q13433 755 aa17.51■□□□□ 0.39
PKM-220ENST00000568459 KIAA1211Q6ZU35 1233 aa17.51■□□□□ 0.39
PKM-220ENST00000568459 N4BP2Q86UW6 1770 aaPredicted RBP17.51■□□□□ 0.39
PKM-220ENST00000568459 AOX1Q06278 1338 aa17.51■□□□□ 0.39
PKM-220ENST00000568459 BRD1O95696 1058 aa17.51■□□□□ 0.39
PKM-220ENST00000568459 IL17REQ8NFR9 667 aa17.51■□□□□ 0.39
PKM-220ENST00000568459 GPT2Q8TD30 523 aa17.51■□□□□ 0.39
PKM-220ENST00000568459 MAP7D2Q96T17 732 aa17.51■□□□□ 0.39
PKM-220ENST00000568459 SRCIN1Q9C0H9 1055 aa17.51■□□□□ 0.39
PKM-220ENST00000568459 RBSNQ9H1K0 784 aa17.51■□□□□ 0.39
PKM-220ENST00000568459 RFC4P35249 363 aa17.5■□□□□ 0.39
PKM-220ENST00000568459 CRKLP46109 303 aaKnown RBP17.5■□□□□ 0.39
PKM-220ENST00000568459 MEIS3Q99687 375 aa17.5■□□□□ 0.39
PKM-220ENST00000568459 AK9Q5TCS8 1911 aa17.5■□□□□ 0.39
PKM-220ENST00000568459 TTC5Q8N0Z6 440 aa17.49■□□□□ 0.39
PKM-220ENST00000568459 OTUD7AQ8TE49 926 aaPredicted RBP17.49■□□□□ 0.39
PKM-220ENST00000568459 ARHGEF1Q92888 912 aaKnown RBP17.49■□□□□ 0.39
PKM-220ENST00000568459 TJP1Q07157 1748 aa17.49■□□□□ 0.39
PKM-220ENST00000568459 PRPF40AO75400 957 aaKnown RBP17.49■□□□□ 0.39
PKM-220ENST00000568459 DCTN1Q14203 1278 aa17.49■□□□□ 0.39
PKM-220ENST00000568459 ZGPATQ8N5A5 531 aaKnown RBP17.49■□□□□ 0.39
PKM-220ENST00000568459 SYAP1Q96A49 352 aaPredicted RBP17.49■□□□□ 0.39
PKM-220ENST00000568459 ZKSCAN5Q9Y2L8 839 aa17.49■□□□□ 0.39
PKM-220ENST00000568459 PXDNLA1KZ92 1463 aa17.48■□□□□ 0.39
PKM-220ENST00000568459 HTATSF1O43719 755 aaKnown RBP17.48■□□□□ 0.39
PKM-220ENST00000568459 PKP1Q13835 747 aa17.48■□□□□ 0.39
PKM-220ENST00000568459 GPR162Q16538 588 aa17.48■□□□□ 0.39
PKM-220ENST00000568459 DNAJC10Q8IXB1 793 aa17.48■□□□□ 0.39
PKM-220ENST00000568459 NLGN1Q8N2Q7 840 aa17.48■□□□□ 0.39
PKM-220ENST00000568459 RTF1Q92541 710 aaKnown RBP17.48■□□□□ 0.39
PKM-220ENST00000568459 TMX3Q96JJ7 454 aa17.48■□□□□ 0.39
PKM-220ENST00000568459 CCDC39Q9UFE4 941 aa17.48■□□□□ 0.39
PKM-220ENST00000568459 STAP2Q9UGK3 403 aa17.48■□□□□ 0.39
PKM-220ENST00000568459 CD2APQ9Y5K6 639 aa17.48■□□□□ 0.39
PKM-220ENST00000568459 CICQ96RK0 1608 aaPredicted RBP17.48■□□□□ 0.39
PKM-220ENST00000568459 GNAI2P04899 355 aa17.47■□□□□ 0.39
PKM-220ENST00000568459 YY1P25490 414 aa17.47■□□□□ 0.39
PKM-220ENST00000568459 NLGN2Q8NFZ4 835 aa17.47■□□□□ 0.39
PKM-220ENST00000568459 ESYT1Q9BSJ8 1104 aa17.47■□□□□ 0.39
PKM-220ENST00000568459 CACNA1FO60840 1977 aa17.47■□□□□ 0.39
PKM-220ENST00000568459 GNAI3P08754 354 aa17.47■□□□□ 0.39
PKM-220ENST00000568459 VSIG10Q8N0Z9 540 aa17.47■□□□□ 0.39
PKM-220ENST00000568459 SIPA1L3O60292 1781 aaPredicted RBP17.46■□□□□ 0.39
PKM-220ENST00000568459 SLC4A2P04920 1241 aa17.46■□□□□ 0.39
PKM-220ENST00000568459 NCLP19338 710 aaKnown RBP17.46■□□□□ 0.39
PKM-220ENST00000568459 CHD4Q14839 1912 aa17.46■□□□□ 0.39
PKM-220ENST00000568459 INTS5Q6P9B9 1019 aaKnown RBP17.46■□□□□ 0.39
PKM-220ENST00000568459 MTERF4Q7Z6M4 381 aaKnown RBP17.46■□□□□ 0.39
PKM-220ENST00000568459 CCDC87Q9NVE4 849 aa17.46■□□□□ 0.39
PKM-220ENST00000568459 TMEM63CQ9P1W3 806 aa17.46■□□□□ 0.39
PKM-220ENST00000568459 SMARCA5O60264 1052 aaPredicted RBP17.45■□□□□ 0.38
PKM-220ENST00000568459 CYP19A1P11511 503 aaPredicted RBP17.45■□□□□ 0.38
PKM-220ENST00000568459 ZNF790Q6PG37 636 aa17.45■□□□□ 0.38
PKM-220ENST00000568459 BABAM1Q9NWV8 329 aa17.45■□□□□ 0.38
PKM-220ENST00000568459 UBR2Q8IWV8 1755 aa17.45■□□□□ 0.38
PKM-220ENST00000568459 KCPQ6ZWJ8 1503 aa17.45■□□□□ 0.38
PKM-220ENST00000568459 CEMIPQ8WUJ3 1361 aa17.45■□□□□ 0.38
PKM-220ENST00000568459 MMP10P09238 476 aa17.44■□□□□ 0.38
PKM-220ENST00000568459 NEK4P51957 841 aa17.44■□□□□ 0.38
PKM-220ENST00000568459 FAM184AQ8NB25 1140 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms