RNA–Protein interactions for RNA: ENST00000568176.5

EDC3-214, Transcript of enhancer of mRNA decapping 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EDC3, Length 1,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-214ENST00000568176 HSP90AB3PQ58FF7 597 aa23.28■■□□□ 1.32
EDC3-214ENST00000568176 USP42Q9H9J4 1324 aaKnown RBP23.27■■□□□ 1.32
EDC3-214ENST00000568176 H7C1W4 665 aa23.27■■□□□ 1.32
EDC3-214ENST00000568176 BAG6P46379 1132 aa23.27■■□□□ 1.32
EDC3-214ENST00000568176 ANKRD44Q8N8A2 993 aa23.27■■□□□ 1.32
EDC3-214ENST00000568176 ANO8Q9HCE9 1232 aaPredicted RBP23.27■■□□□ 1.32
EDC3-214ENST00000568176 EPHA10Q5JZY3 1008 aa23.26■■□□□ 1.31
EDC3-214ENST00000568176 SYNE4Q8N205 404 aa23.26■■□□□ 1.31
EDC3-214ENST00000568176 ADRA2BP18089 450 aa23.26■■□□□ 1.31
EDC3-214ENST00000568176 SSFA2P28290 1259 aa23.26■■□□□ 1.31
EDC3-214ENST00000568176 RFC4P35249 363 aa23.26■■□□□ 1.31
EDC3-214ENST00000568176 HDAC1Q13547 482 aaPredicted RBP23.26■■□□□ 1.31
EDC3-214ENST00000568176 PNMA6EA0A0J9YXQ4 647 aa23.25■■□□□ 1.31
EDC3-214ENST00000568176 ZPR1O75312 459 aa23.25■■□□□ 1.31
EDC3-214ENST00000568176 CLEC4GQ6UXB4 293 aa23.25■■□□□ 1.31
EDC3-214ENST00000568176 TFCP2L1Q9NZI6 479 aa23.25■■□□□ 1.31
EDC3-214ENST00000568176 TBC1D9BQ66K14 1250 aa23.24■■□□□ 1.31
EDC3-214ENST00000568176 NIP7Q9Y221 180 aaKnown RBP eCLIP23.24■■□□□ 1.31
EDC3-214ENST00000568176 SUSD4Q5VX71 490 aa23.24■■□□□ 1.31
EDC3-214ENST00000568176 RPAP2Q8IXW5 612 aaPredicted RBP23.24■■□□□ 1.31
EDC3-214ENST00000568176 FAM89AQ96GI7 184 aa23.24■■□□□ 1.31
EDC3-214ENST00000568176 RWDD1Q9H446 243 aaPredicted RBP23.24■■□□□ 1.31
EDC3-214ENST00000568176 BICC1Q9H694 974 aaKnown RBP23.24■■□□□ 1.31
EDC3-214ENST00000568176 ZNF652Q9Y2D9 606 aa23.23■■□□□ 1.31
EDC3-214ENST00000568176 FAM177BA6PVY3 158 aa23.22■■□□□ 1.31
EDC3-214ENST00000568176 ATP8B2P98198 1209 aa23.22■■□□□ 1.31
EDC3-214ENST00000568176 BICDL1Q6ZP65 573 aa23.22■■□□□ 1.31
EDC3-214ENST00000568176 CENPQQ7L2Z9 268 aaPredicted RBP23.22■■□□□ 1.31
EDC3-214ENST00000568176 PCCAP05165 728 aaPredicted RBP23.22■■□□□ 1.31
EDC3-214ENST00000568176 COL23A1Q86Y22 540 aaPredicted RBP23.22■■□□□ 1.31
EDC3-214ENST00000568176 ZBTB38Q8NAP3 1195 aaPredicted RBP23.22■■□□□ 1.31
EDC3-214ENST00000568176 RGL2O15211 777 aa23.21■■□□□ 1.31
EDC3-214ENST00000568176 PPP1R42Q7Z4L9 355 aa23.21■■□□□ 1.31
EDC3-214ENST00000568176 SKAP1Q86WV1 359 aa23.21■■□□□ 1.31
EDC3-214ENST00000568176 PNPLA7Q6ZV29 1317 aa23.21■■□□□ 1.31
EDC3-214ENST00000568176 COL24A1Q17RW2 1714 aa23.21■■□□□ 1.31
EDC3-214ENST00000568176 GYS1P13807 737 aa23.2■■□□□ 1.3
EDC3-214ENST00000568176 HMGB2P26583 209 aaKnown RBP23.2■■□□□ 1.3
EDC3-214ENST00000568176 CCDC125Q86Z20 511 aa23.2■■□□□ 1.3
EDC3-214ENST00000568176 TRMT112Q9UI30 125 aaKnown RBP23.2■■□□□ 1.3
EDC3-214ENST00000568176 FOXO4P98177 505 aa23.19■■□□□ 1.3
EDC3-214ENST00000568176 NTSR2O95665 410 aa23.19■■□□□ 1.3
EDC3-214ENST00000568176 MTX1Q13505 466 aa23.18■■□□□ 1.3
EDC3-214ENST00000568176 SLC15A2Q16348 729 aa23.18■■□□□ 1.3
EDC3-214ENST00000568176 UPF1Q92900 1129 aaKnown RBP eCLIP23.18■■□□□ 1.3
EDC3-214ENST00000568176 POLA2Q14181 598 aa23.17■■□□□ 1.3
EDC3-214ENST00000568176 PARP10Q53GL7 1025 aa23.17■■□□□ 1.3
EDC3-214ENST00000568176 SSH3Q8TE77 659 aa23.17■■□□□ 1.3
EDC3-214ENST00000568176 DDX60Q8IY21 1712 aaKnown RBP23.17■■□□□ 1.3
EDC3-214ENST00000568176 SRGAP3O43295 1099 aa23.17■■□□□ 1.3
EDC3-214ENST00000568176 NUTM1Q86Y26 1132 aa23.17■■□□□ 1.3
EDC3-214ENST00000568176 SMC5Q8IY18 1101 aa23.17■■□□□ 1.3
EDC3-214ENST00000568176 UTP14AQ9BVJ6 771 aaKnown RBP23.17■■□□□ 1.3
EDC3-214ENST00000568176 NFIXQ14938 502 aa23.16■■□□□ 1.3
EDC3-214ENST00000568176 QSER1Q2KHR3 1735 aa23.16■■□□□ 1.3
EDC3-214ENST00000568176 RABL6Q3YEC7 729 aaPredicted RBP23.16■■□□□ 1.3
EDC3-214ENST00000568176 CDHR2Q9BYE9 1310 aa23.16■■□□□ 1.3
EDC3-214ENST00000568176 MYH3P11055 1940 aa23.15■■□□□ 1.3
EDC3-214ENST00000568176 SETDB2Q96T68 719 aa23.15■■□□□ 1.3
EDC3-214ENST00000568176 DCTPP1Q9H773 170 aa23.15■■□□□ 1.3
EDC3-214ENST00000568176 STK32BQ9NY57 414 aa23.15■■□□□ 1.3
EDC3-214ENST00000568176 HDAC5Q9UQL6 1122 aa23.15■■□□□ 1.3
EDC3-214ENST00000568176 IRS4O14654 1257 aaPredicted RBP23.14■■□□□ 1.29
EDC3-214ENST00000568176 LMBR1LQ6UX01 489 aa23.14■■□□□ 1.29
EDC3-214ENST00000568176 SH3TC1Q8TE82 1336 aa23.13■■□□□ 1.29
EDC3-214ENST00000568176 MSH5O43196 834 aa23.13■■□□□ 1.29
EDC3-214ENST00000568176 HMMRO75330 724 aa23.13■■□□□ 1.29
EDC3-214ENST00000568176 HCLS1P14317 486 aaPredicted RBP23.13■■□□□ 1.29
EDC3-214ENST00000568176 PLA2G12BQ9BX93 195 aa23.13■■□□□ 1.29
EDC3-214ENST00000568176 LAMB2P55268 1798 aa23.13■■□□□ 1.29
EDC3-214ENST00000568176 PDGFDQ9GZP0 370 aaPredicted RBP23.12■■□□□ 1.29
EDC3-214ENST00000568176 CASZ1Q86V15 1759 aa23.12■■□□□ 1.29
EDC3-214ENST00000568176 ERFEQ4G0M1 354 aa23.12■■□□□ 1.29
EDC3-214ENST00000568176 ILDR2Q71H61 639 aa23.12■■□□□ 1.29
EDC3-214ENST00000568176 FLAD1Q8NFF5 587 aa23.12■■□□□ 1.29
EDC3-214ENST00000568176 PA2G4Q9UQ80 394 aaKnown RBP23.12■■□□□ 1.29
EDC3-214ENST00000568176 EXOC6BQ9Y2D4 811 aa23.12■■□□□ 1.29
EDC3-214ENST00000568176 TM4SF1P30408 202 aa23.11■■□□□ 1.29
EDC3-214ENST00000568176 KLHDC4Q8TBB5 520 aa23.11■■□□□ 1.29
EDC3-214ENST00000568176 PDZRN3Q9UPQ7 1066 aa23.11■■□□□ 1.29
EDC3-214ENST00000568176 RFX5P48382 616 aaPredicted RBP23.1■■□□□ 1.29
EDC3-214ENST00000568176 CCDC24Q8N4L8 307 aa23.1■■□□□ 1.29
EDC3-214ENST00000568176 GCC1Q96CN9 775 aa23.1■■□□□ 1.29
EDC3-214ENST00000568176 CCDC85AQ96PX6 553 aaPredicted RBP23.1■■□□□ 1.29
EDC3-214ENST00000568176 ABCC12Q96J65 1359 aa23.1■■□□□ 1.29
EDC3-214ENST00000568176 DDR1Q08345 913 aa23.1■■□□□ 1.29
EDC3-214ENST00000568176 CARMIL3Q8ND23 1372 aa23.09■■□□□ 1.29
EDC3-214ENST00000568176 CSF1RP07333 972 aa23.09■■□□□ 1.29
EDC3-214ENST00000568176 C3orf67Q6ZVT6 689 aa23.09■■□□□ 1.29
EDC3-214ENST00000568176 NBPF5PQ86XG9 351 aaPredicted RBP23.09■■□□□ 1.29
EDC3-214ENST00000568176 TTLL11Q8NHH1 800 aa23.09■■□□□ 1.29
EDC3-214ENST00000568176 APBB1O00213 710 aa23.08■■□□□ 1.29
EDC3-214ENST00000568176 PDE8AO60658 829 aa23.08■■□□□ 1.29
EDC3-214ENST00000568176 CTSWP56202 376 aa23.08■■□□□ 1.29
EDC3-214ENST00000568176 CHMP3Q9Y3E7 222 aa23.08■■□□□ 1.29
EDC3-214ENST00000568176 FAM161AQ3B820 660 aa23.08■■□□□ 1.28
EDC3-214ENST00000568176 MSL1Q68DK7 614 aa23.08■■□□□ 1.28
EDC3-214ENST00000568176 SURF6O75683 361 aaKnown RBP23.07■■□□□ 1.28
EDC3-214ENST00000568176 NUCB1Q02818 461 aa23.07■■□□□ 1.28
EDC3-214ENST00000568176 POLRMTO00411 1230 aaKnown RBP23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms