RNA–Protein interactions for RNA: ENST00000568151.1

SPG7-217, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 4

Gene SPG7, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-217ENST00000568151 NLRP10Q86W26 655 aa29.43■■■□□ 2.3
SPG7-217ENST00000568151 UTP14AQ9BVJ6 771 aaKnown RBP29.43■■■□□ 2.3
SPG7-217ENST00000568151 RNF181Q9P0P0 153 aa29.42■■■□□ 2.3
SPG7-217ENST00000568151 CCDC88AQ3V6T2 1871 aa29.41■■■□□ 2.3
SPG7-217ENST00000568151 PHAXQ9H814 394 aaKnown RBP29.41■■■□□ 2.3
SPG7-217ENST00000568151 GPBP1L1Q9HC44 474 aaPredicted RBP29.41■■■□□ 2.3
SPG7-217ENST00000568151 CCDC30Q5VVM6 783 aa29.4■■■□□ 2.3
SPG7-217ENST00000568151 C7orf43Q8WVR3 580 aa29.4■■■□□ 2.3
SPG7-217ENST00000568151 FANCIQ9NVI1 1328 aa29.4■■■□□ 2.3
SPG7-217ENST00000568151 SLC10A5Q5PT55 438 aa29.39■■■□□ 2.3
SPG7-217ENST00000568151 C3orf67Q6ZVT6 689 aa29.39■■■□□ 2.3
SPG7-217ENST00000568151 LMNB1P20700 586 aa29.38■■■□□ 2.29
SPG7-217ENST00000568151 TWISTNBQ3B726 338 aaPredicted RBP29.38■■■□□ 2.29
SPG7-217ENST00000568151 ISCA1Q9BUE6 129 aa29.38■■■□□ 2.29
SPG7-217ENST00000568151 RNF123Q5XPI4 1314 aa29.38■■■□□ 2.29
SPG7-217ENST00000568151 CHMP4AQ9BY43 222 aa29.37■■■□□ 2.29
SPG7-217ENST00000568151 SPINK5Q9NQ38 1064 aaPredicted RBP29.37■■■□□ 2.29
SPG7-217ENST00000568151 ALDH1B1P30837 517 aa29.36■■■□□ 2.29
SPG7-217ENST00000568151 HOXA10P31260 410 aaPredicted RBP29.36■■■□□ 2.29
SPG7-217ENST00000568151 SYNE4Q8N205 404 aa29.36■■■□□ 2.29
SPG7-217ENST00000568151 ATP5J2-PTCD1G3V325 749 aa29.35■■■□□ 2.29
SPG7-217ENST00000568151 GOLGA2Q08379 1002 aa29.35■■■□□ 2.29
SPG7-217ENST00000568151 SOGA3Q5TF21 947 aa29.35■■■□□ 2.29
SPG7-217ENST00000568151 ZNF428Q96B54 188 aa29.35■■■□□ 2.29
SPG7-217ENST00000568151 TRMT112Q9UI30 125 aaKnown RBP29.35■■■□□ 2.29
SPG7-217ENST00000568151 RIC3Q7Z5B4 369 aa29.34■■■□□ 2.29
SPG7-217ENST00000568151 RPGRQ92834 1020 aaKnown RBP29.34■■■□□ 2.29
SPG7-217ENST00000568151 LTBP3Q9NS15 1303 aa29.34■■■□□ 2.29
SPG7-217ENST00000568151 LAMB2P55268 1798 aa29.34■■■□□ 2.29
SPG7-217ENST00000568151 TCERG1O14776 1098 aaKnown RBP29.33■■■□□ 2.29
SPG7-217ENST00000568151 OLFM4Q6UX06 510 aa29.33■■■□□ 2.29
SPG7-217ENST00000568151 NLRP3Q96P20 1036 aa29.33■■■□□ 2.29
SPG7-217ENST00000568151 TAOK3Q9H2K8 898 aa29.33■■■□□ 2.29
SPG7-217ENST00000568151 SH3TC1Q8TE82 1336 aa29.32■■■□□ 2.28
SPG7-217ENST00000568151 DICER1Q9UPY3 1922 aaKnown RBP29.32■■■□□ 2.28
SPG7-217ENST00000568151 TIAM2Q8IVF5 1701 aa29.31■■■□□ 2.28
SPG7-217ENST00000568151 ZNF521Q96K83 1311 aa29.31■■■□□ 2.28
SPG7-217ENST00000568151 HCLS1P14317 486 aaPredicted RBP29.31■■■□□ 2.28
SPG7-217ENST00000568151 C1QTNF8P60827 252 aa29.31■■■□□ 2.28
SPG7-217ENST00000568151 TRIM28Q13263 835 aaKnown RBP29.31■■■□□ 2.28
SPG7-217ENST00000568151 CCDC93Q567U6 631 aa29.31■■■□□ 2.28
SPG7-217ENST00000568151 ZC3H4Q9UPT8 1303 aaKnown RBP29.3■■■□□ 2.28
SPG7-217ENST00000568151 CCER2I3L3R5 266 aa29.3■■■□□ 2.28
SPG7-217ENST00000568151 EXOSC9Q06265 439 aaKnown RBP29.3■■■□□ 2.28
SPG7-217ENST00000568151 CRAMP1Q96RY5 1269 aa29.3■■■□□ 2.28
SPG7-217ENST00000568151 STK31Q9BXU1 1019 aa29.3■■■□□ 2.28
SPG7-217ENST00000568151 DDX60Q8IY21 1712 aaKnown RBP29.29■■■□□ 2.28
SPG7-217ENST00000568151 KIF3CO14782 793 aa29.29■■■□□ 2.28
SPG7-217ENST00000568151 RBM17Q96I25 401 aaKnown RBP29.29■■■□□ 2.28
SPG7-217ENST00000568151 VAMP4O75379 141 aa29.28■■■□□ 2.28
SPG7-217ENST00000568151 SNED1Q8TER0 1413 aa29.28■■■□□ 2.28
SPG7-217ENST00000568151 DDX58O95786 925 aaKnown RBP29.27■■■□□ 2.28
SPG7-217ENST00000568151 G2E3Q7L622 706 aa29.27■■■□□ 2.28
SPG7-217ENST00000568151 FAM89AQ96GI7 184 aa29.27■■■□□ 2.28
SPG7-217ENST00000568151 MYD88Q99836 296 aa29.27■■■□□ 2.28
SPG7-217ENST00000568151 MYH16Q9H6N6 1097 aa29.27■■■□□ 2.28
SPG7-217ENST00000568151 NMRK2Q9NPI5 230 aa29.27■■■□□ 2.28
SPG7-217ENST00000568151 SLC4A2P04920 1241 aa29.26■■■□□ 2.27
SPG7-217ENST00000568151 CACNA1FO60840 1977 aa29.25■■■□□ 2.27
SPG7-217ENST00000568151 SLC51AQ86UW1 340 aa29.25■■■□□ 2.27
SPG7-217ENST00000568151 RTKN2Q8IZC4 609 aa29.25■■■□□ 2.27
SPG7-217ENST00000568151 METTL22Q9BUU2 404 aaPredicted RBP29.25■■■□□ 2.27
SPG7-217ENST00000568151 MAP3K2Q9Y2U5 619 aa29.25■■■□□ 2.27
SPG7-217ENST00000568151 FKBP4Q02790 459 aaKnown RBP eCLIP29.24■■■□□ 2.27
SPG7-217ENST00000568151 KSR2Q6VAB6 950 aa29.24■■■□□ 2.27
SPG7-217ENST00000568151 ABCC4O15439 1325 aa29.23■■■□□ 2.27
SPG7-217ENST00000568151 KDM2BQ8NHM5 1336 aa29.23■■■□□ 2.27
SPG7-217ENST00000568151 PI4KAP2A4QPH2 592 aa29.23■■■□□ 2.27
SPG7-217ENST00000568151 PI4KAP1Q8N8J0 262 aa29.23■■■□□ 2.27
SPG7-217ENST00000568151 PPEF1O14829 653 aaPredicted RBP29.22■■■□□ 2.27
SPG7-217ENST00000568151 RTL5Q5HYW3 569 aaPredicted RBP29.22■■■□□ 2.27
SPG7-217ENST00000568151 CC2D2BQ6DHV5 1058 aa29.22■■■□□ 2.27
SPG7-217ENST00000568151 TAF1P21675 1872 aa29.21■■■□□ 2.27
SPG7-217ENST00000568151 CCDC191Q8NCU4 936 aa29.21■■■□□ 2.27
SPG7-217ENST00000568151 GLTPD2A6NH11 291 aa29.2■■■□□ 2.26
SPG7-217ENST00000568151 ZBTB38Q8NAP3 1195 aaPredicted RBP29.2■■■□□ 2.26
SPG7-217ENST00000568151 ZNF277Q9NRM2 450 aaPredicted RBP29.2■■■□□ 2.26
SPG7-217ENST00000568151 IRS4O14654 1257 aaPredicted RBP29.19■■■□□ 2.26
SPG7-217ENST00000568151 FLIIQ13045 1269 aa29.19■■■□□ 2.26
SPG7-217ENST00000568151 CWC25Q9NXE8 425 aaPredicted RBP29.19■■■□□ 2.26
SPG7-217ENST00000568151 IGKV5-2P06315 115 aa29.18■■■□□ 2.26
SPG7-217ENST00000568151 SF3B3Q15393 1217 aaKnown RBP29.18■■■□□ 2.26
SPG7-217ENST00000568151 DDX46Q7L014 1031 aaKnown RBP29.18■■■□□ 2.26
SPG7-217ENST00000568151 PSMD1Q99460 953 aa29.18■■■□□ 2.26
SPG7-217ENST00000568151 RRAGCQ9HB90 399 aa29.17■■■□□ 2.26
SPG7-217ENST00000568151 ATP6V0A2Q9Y487 856 aa29.17■■■□□ 2.26
SPG7-217ENST00000568151 BBOX1O75936 387 aa29.16■■■□□ 2.26
SPG7-217ENST00000568151 PCCAP05165 728 aaPredicted RBP29.16■■■□□ 2.26
SPG7-217ENST00000568151 IARSP41252 1262 aaKnown RBP29.15■■■□□ 2.26
SPG7-217ENST00000568151 GRAPQ13588 217 aa29.15■■■□□ 2.26
SPG7-217ENST00000568151 GRIPAP1Q4V328 841 aa29.15■■■□□ 2.26
SPG7-217ENST00000568151 GRAPLQ8TC17 118 aaPredicted RBP29.15■■■□□ 2.26
SPG7-217ENST00000568151 JARID2Q92833 1246 aaPredicted RBP29.15■■■□□ 2.26
SPG7-217ENST00000568151 DIEXFQ68CQ4 756 aaKnown RBP29.14■■■□□ 2.26
SPG7-217ENST00000568151 COL4A1P02462 1669 aa29.13■■■□□ 2.25
SPG7-217ENST00000568151 NEXNQ0ZGT2 675 aa29.13■■■□□ 2.25
SPG7-217ENST00000568151 FKBP5Q13451 457 aaPredicted RBP29.13■■■□□ 2.25
SPG7-217ENST00000568151 CWF19L2Q2TBE0 894 aaKnown RBP29.13■■■□□ 2.25
SPG7-217ENST00000568151 WDR90Q96KV7 1748 aa29.12■■■□□ 2.25
SPG7-217ENST00000568151 NEURL1BA8MQ27 555 aa29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms