RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 TCIRG1Q13488 830 aa32.6■■■□□ 2.81
FANCA-228ENST00000567943 TSR2Q969E8 191 aaKnown RBP32.6■■■□□ 2.81
FANCA-228ENST00000567943 PPP1R42Q7Z4L9 355 aa32.59■■■□□ 2.81
FANCA-228ENST00000567943 NLRP10Q86W26 655 aa32.59■■■□□ 2.81
FANCA-228ENST00000567943 TSPYL6Q8N831 410 aa32.59■■■□□ 2.81
FANCA-228ENST00000567943 NMRK2Q9NPI5 230 aa32.59■■■□□ 2.81
FANCA-228ENST00000567943 OLFM4Q6UX06 510 aa32.58■■■□□ 2.81
FANCA-228ENST00000567943 PLBD2Q8NHP8 589 aa32.58■■■□□ 2.81
FANCA-228ENST00000567943 HYPKQ9NX55 129 aa32.58■■■□□ 2.81
FANCA-228ENST00000567943 LTBP3Q9NS15 1303 aa32.57■■■□□ 2.8
FANCA-228ENST00000567943 HSP90AB3PQ58FF7 597 aa32.57■■■□□ 2.8
FANCA-228ENST00000567943 ANKRD13DQ6ZTN6 518 aa32.57■■■□□ 2.8
FANCA-228ENST00000567943 UTP14AQ9BVJ6 771 aaKnown RBP32.57■■■□□ 2.8
FANCA-228ENST00000567943 LAMB2P55268 1798 aa32.57■■■□□ 2.8
FANCA-228ENST00000567943 SLC10A5Q5PT55 438 aa32.56■■■□□ 2.8
FANCA-228ENST00000567943 SYNE4Q8N205 404 aa32.56■■■□□ 2.8
FANCA-228ENST00000567943 HOXA10P31260 410 aaPredicted RBP32.55■■■□□ 2.8
FANCA-228ENST00000567943 PHAXQ9H814 394 aaKnown RBP32.55■■■□□ 2.8
FANCA-228ENST00000567943 CEP350Q5VT06 3117 aa32.55■■■□□ 2.8
FANCA-228ENST00000567943 ZC3H4Q9UPT8 1303 aaKnown RBP32.54■■■□□ 2.8
FANCA-228ENST00000567943 ALDH1B1P30837 517 aa32.54■■■□□ 2.8
FANCA-228ENST00000567943 TAOK3Q9H2K8 898 aa32.54■■■□□ 2.8
FANCA-228ENST00000567943 IL16Q14005 1332 aa32.53■■■□□ 2.8
FANCA-228ENST00000567943 SNED1Q8TER0 1413 aa32.53■■■□□ 2.8
FANCA-228ENST00000567943 SOGA3Q5TF21 947 aa32.53■■■□□ 2.8
FANCA-228ENST00000567943 ZNF428Q96B54 188 aa32.53■■■□□ 2.8
FANCA-228ENST00000567943 ISCA1Q9BUE6 129 aa32.52■■■□□ 2.8
FANCA-228ENST00000567943 CCDC93Q567U6 631 aa32.51■■■□□ 2.79
FANCA-228ENST00000567943 SLC51AQ86UW1 340 aa32.51■■■□□ 2.79
FANCA-228ENST00000567943 RNF123Q5XPI4 1314 aa32.51■■■□□ 2.79
FANCA-228ENST00000567943 RPGRQ92834 1020 aaKnown RBP32.5■■■□□ 2.79
FANCA-228ENST00000567943 DDX60Q8IY21 1712 aaKnown RBP32.5■■■□□ 2.79
FANCA-228ENST00000567943 WDR63Q8IWG1 891 aa32.49■■■□□ 2.79
FANCA-228ENST00000567943 KDM2BQ8NHM5 1336 aa32.49■■■□□ 2.79
FANCA-228ENST00000567943 ATP5J2-PTCD1G3V325 749 aa32.48■■■□□ 2.79
FANCA-228ENST00000567943 HCLS1P14317 486 aaPredicted RBP32.48■■■□□ 2.79
FANCA-228ENST00000567943 NLRP3Q96P20 1036 aa32.48■■■□□ 2.79
FANCA-228ENST00000567943 CRAMP1Q96RY5 1269 aa32.48■■■□□ 2.79
FANCA-228ENST00000567943 TRMT112Q9UI30 125 aaKnown RBP32.48■■■□□ 2.79
FANCA-228ENST00000567943 CCDC30Q5VVM6 783 aa32.47■■■□□ 2.79
FANCA-228ENST00000567943 GLTPD2A6NH11 291 aa32.46■■■□□ 2.79
FANCA-228ENST00000567943 CCER2I3L3R5 266 aa32.46■■■□□ 2.79
FANCA-228ENST00000567943 RRAGCQ9HB90 399 aa32.46■■■□□ 2.79
FANCA-228ENST00000567943 SH3TC1Q8TE82 1336 aa32.46■■■□□ 2.79
FANCA-228ENST00000567943 FANCIQ9NVI1 1328 aa32.46■■■□□ 2.79
FANCA-228ENST00000567943 TAF1P21675 1872 aa32.46■■■□□ 2.79
FANCA-228ENST00000567943 RBM17Q96I25 401 aaKnown RBP32.45■■■□□ 2.79
FANCA-228ENST00000567943 FKBP4Q02790 459 aaKnown RBP eCLIP32.44■■■□□ 2.78
FANCA-228ENST00000567943 TRIM28Q13263 835 aaKnown RBP32.44■■■□□ 2.78
FANCA-228ENST00000567943 SPINK5Q9NQ38 1064 aaPredicted RBP32.44■■■□□ 2.78
FANCA-228ENST00000567943 TCERG1O14776 1098 aaKnown RBP32.43■■■□□ 2.78
FANCA-228ENST00000567943 TWISTNBQ3B726 338 aaPredicted RBP32.43■■■□□ 2.78
FANCA-228ENST00000567943 RIC3Q7Z5B4 369 aa32.43■■■□□ 2.78
FANCA-228ENST00000567943 RTKN2Q8IZC4 609 aa32.43■■■□□ 2.78
FANCA-228ENST00000567943 TOMM70O94826 608 aa32.42■■■□□ 2.78
FANCA-228ENST00000567943 GOLGA2Q08379 1002 aa32.42■■■□□ 2.78
FANCA-228ENST00000567943 ZNF277Q9NRM2 450 aaPredicted RBP32.42■■■□□ 2.78
FANCA-228ENST00000567943 FAM89AQ96GI7 184 aa32.41■■■□□ 2.78
FANCA-228ENST00000567943 CHMP4AQ9BY43 222 aa32.41■■■□□ 2.78
FANCA-228ENST00000567943 DIEXFQ68CQ4 756 aaKnown RBP32.4■■■□□ 2.78
FANCA-228ENST00000567943 ABCC4O15439 1325 aa32.4■■■□□ 2.78
FANCA-228ENST00000567943 WDR90Q96KV7 1748 aa32.4■■■□□ 2.78
FANCA-228ENST00000567943 POTECB2RU33 542 aa32.39■■■□□ 2.78
FANCA-228ENST00000567943 PPEF1O14829 653 aaPredicted RBP32.39■■■□□ 2.78
FANCA-228ENST00000567943 PSMD1Q99460 953 aa32.38■■■□□ 2.77
FANCA-228ENST00000567943 CC2D2BQ6DHV5 1058 aa32.37■■■□□ 2.77
FANCA-228ENST00000567943 G2E3Q7L622 706 aa32.37■■■□□ 2.77
FANCA-228ENST00000567943 MYD88Q99836 296 aa32.37■■■□□ 2.77
FANCA-228ENST00000567943 COL4A5P29400 1685 aa32.37■■■□□ 2.77
FANCA-228ENST00000567943 RTL5Q5HYW3 569 aaPredicted RBP32.36■■■□□ 2.77
FANCA-228ENST00000567943 METTL22Q9BUU2 404 aaPredicted RBP32.36■■■□□ 2.77
FANCA-228ENST00000567943 COL4A1P02462 1669 aa32.36■■■□□ 2.77
FANCA-228ENST00000567943 CACNA1FO60840 1977 aa32.35■■■□□ 2.77
FANCA-228ENST00000567943 VAMP4O75379 141 aa32.34■■■□□ 2.77
FANCA-228ENST00000567943 IARSP41252 1262 aaKnown RBP32.34■■■□□ 2.77
FANCA-228ENST00000567943 EXOSC9Q06265 439 aaKnown RBP32.34■■■□□ 2.77
FANCA-228ENST00000567943 DPY19L2Q6NUT2 758 aa32.34■■■□□ 2.77
FANCA-228ENST00000567943 MAP3K2Q9Y2U5 619 aa32.34■■■□□ 2.77
FANCA-228ENST00000567943 ATP6V0A2Q9Y487 856 aa32.34■■■□□ 2.77
FANCA-228ENST00000567943 ZNF521Q96K83 1311 aa32.33■■■□□ 2.77
FANCA-228ENST00000567943 SLC4A2P04920 1241 aa32.33■■■□□ 2.77
FANCA-228ENST00000567943 HSPA6P17066 643 aa32.33■■■□□ 2.77
FANCA-228ENST00000567943 RBM46Q8TBY0 533 aaKnown RBP32.33■■■□□ 2.77
FANCA-228ENST00000567943 STK31Q9BXU1 1019 aa32.33■■■□□ 2.77
FANCA-228ENST00000567943 MYH16Q9H6N6 1097 aa32.33■■■□□ 2.77
FANCA-228ENST00000567943 PI4KAP2A4QPH2 592 aa32.32■■■□□ 2.76
FANCA-228ENST00000567943 DDNO94850 711 aaPredicted RBP32.32■■■□□ 2.76
FANCA-228ENST00000567943 DDX58O95786 925 aaKnown RBP32.32■■■□□ 2.76
FANCA-228ENST00000567943 VEGFAP15692 232 aaPredicted RBP32.32■■■□□ 2.76
FANCA-228ENST00000567943 SF3B3Q15393 1217 aaKnown RBP32.32■■■□□ 2.76
FANCA-228ENST00000567943 KSR2Q6VAB6 950 aa32.32■■■□□ 2.76
FANCA-228ENST00000567943 PI4KAP1Q8N8J0 262 aa32.32■■■□□ 2.76
FANCA-228ENST00000567943 IRS4O14654 1257 aaPredicted RBP32.31■■■□□ 2.76
FANCA-228ENST00000567943 ZBTB38Q8NAP3 1195 aaPredicted RBP32.31■■■□□ 2.76
FANCA-228ENST00000567943 CCDC191Q8NCU4 936 aa32.31■■■□□ 2.76
FANCA-228ENST00000567943 ZNF541Q9H0D2 1346 aa32.3■■■□□ 2.76
FANCA-228ENST00000567943 BBOX1O75936 387 aa32.3■■■□□ 2.76
FANCA-228ENST00000567943 IGKV5-2P06315 115 aa32.3■■■□□ 2.76
FANCA-228ENST00000567943 GRIPAP1Q4V328 841 aa32.3■■■□□ 2.76
FANCA-228ENST00000567943 DDX46Q7L014 1031 aaKnown RBP32.3■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms